RNA–Protein interactions for RNA: ENST00000246529.3

LRFN3-201, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN3, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-201ENST00000246529 LTN1O94822 1766 aa21.49■■□□□ 1.03
LRFN3-201ENST00000246529 EIF2S2P20042 333 aaKnown RBP21.49■■□□□ 1.03
LRFN3-201ENST00000246529 FAM208AQ9UK61 1670 aaKnown RBP21.48■■□□□ 1.03
LRFN3-201ENST00000246529 KCNQ3O43525 872 aa21.48■■□□□ 1.03
LRFN3-201ENST00000246529 LMOD2Q6P5Q4 547 aa21.48■■□□□ 1.03
LRFN3-201ENST00000246529 RTN4Q9NQC3 1192 aaKnown RBP21.48■■□□□ 1.03
LRFN3-201ENST00000246529 LRRFIP2Q9Y608 721 aaKnown RBP21.47■■□□□ 1.03
LRFN3-201ENST00000246529 USP26Q9BXU7 913 aa21.47■■□□□ 1.03
LRFN3-201ENST00000246529 SETD1BQ9UPS6 1966 aaKnown RBP21.46■■□□□ 1.03
LRFN3-201ENST00000246529 K7ELQ4 463 aaPredicted RBP21.46■■□□□ 1.03
LRFN3-201ENST00000246529 GNAI3P08754 354 aa21.46■■□□□ 1.03
LRFN3-201ENST00000246529 PDE1AP54750 535 aa21.46■■□□□ 1.03
LRFN3-201ENST00000246529 GZF1Q9H116 711 aaPredicted RBP21.46■■□□□ 1.03
LRFN3-201ENST00000246529 CEMIPQ8WUJ3 1361 aa21.45■■□□□ 1.03
LRFN3-201ENST00000246529 HSP90AA1P07900 732 aaKnown RBP21.45■■□□□ 1.02
LRFN3-201ENST00000246529 KCNH5Q8NCM2 988 aa21.45■■□□□ 1.02
LRFN3-201ENST00000246529 BABAM1Q9NWV8 329 aa21.45■■□□□ 1.02
LRFN3-201ENST00000246529 MPRIPQ6WCQ1 1025 aa21.45■■□□□ 1.02
LRFN3-201ENST00000246529 USP44Q9H0E7 712 aa21.45■■□□□ 1.02
LRFN3-201ENST00000246529 GCP02774 474 aa21.44■■□□□ 1.02
LRFN3-201ENST00000246529 EIF4A1P60842 406 aaKnown RBP21.44■■□□□ 1.02
LRFN3-201ENST00000246529 ATP8B2P98198 1209 aa21.44■■□□□ 1.02
LRFN3-201ENST00000246529 ZNF530Q6P9A1 599 aaPredicted RBP21.44■■□□□ 1.02
LRFN3-201ENST00000246529 NPHP4O75161 1426 aaPredicted RBP21.43■■□□□ 1.02
LRFN3-201ENST00000246529 ANXA1P04083 346 aa21.43■■□□□ 1.02
LRFN3-201ENST00000246529 TNPO1Q92973 898 aaKnown RBP21.43■■□□□ 1.02
LRFN3-201ENST00000246529 ARXQ96QS3 562 aa21.43■■□□□ 1.02
LRFN3-201ENST00000246529 ZNF142P52746 1687 aaPredicted RBP21.42■■□□□ 1.02
LRFN3-201ENST00000246529 LRRCC1Q9C099 1032 aa21.42■■□□□ 1.02
LRFN3-201ENST00000246529 CHPF2Q9P2E5 772 aa21.42■■□□□ 1.02
LRFN3-201ENST00000246529 CASC1Q6TDU7 716 aa21.41■■□□□ 1.02
LRFN3-201ENST00000246529 SOS1Q07889 1333 aaPredicted RBP21.41■■□□□ 1.02
LRFN3-201ENST00000246529 TRAK2O60296 914 aa21.4■■□□□ 1.02
LRFN3-201ENST00000246529 UBTFL1P0CB47 393 aaPredicted RBP21.4■■□□□ 1.02
LRFN3-201ENST00000246529 OSBPL3Q9H4L5 887 aa21.4■■□□□ 1.02
LRFN3-201ENST00000246529 RGPD2P0DJD1 1756 aa21.4■■□□□ 1.02
LRFN3-201ENST00000246529 ARHGEF25Q86VW2 580 aa21.4■■□□□ 1.02
LRFN3-201ENST00000246529 TEFQ10587 303 aa21.39■■□□□ 1.02
LRFN3-201ENST00000246529 AXIN2Q9Y2T1 843 aa21.39■■□□□ 1.02
LRFN3-201ENST00000246529 SALL3Q9BXA9 1300 aa21.39■■□□□ 1.02
LRFN3-201ENST00000246529 BTBD11A6QL63 1104 aa21.39■■□□□ 1.01
LRFN3-201ENST00000246529 RABEP1Q15276 862 aa21.39■■□□□ 1.01
LRFN3-201ENST00000246529 IBTKQ9P2D0 1353 aaPredicted RBP21.39■■□□□ 1.01
LRFN3-201ENST00000246529 AKAP4Q5JQC9 854 aa21.38■■□□□ 1.01
LRFN3-201ENST00000246529 ANKRD24Q8TF21 1146 aa21.38■■□□□ 1.01
LRFN3-201ENST00000246529 RAB3GAP1Q15042 981 aa21.38■■□□□ 1.01
LRFN3-201ENST00000246529 PXDNQ92626 1479 aa21.38■■□□□ 1.01
LRFN3-201ENST00000246529 MX1P20591 662 aa21.37■■□□□ 1.01
LRFN3-201ENST00000246529 PLEKHO1Q53GL0 409 aaPredicted RBP21.37■■□□□ 1.01
LRFN3-201ENST00000246529 IL1RAPL2Q9NP60 686 aa21.37■■□□□ 1.01
LRFN3-201ENST00000246529 CIZ1Q9ULV3 898 aaPredicted RBP21.37■■□□□ 1.01
LRFN3-201ENST00000246529 MED1Q15648 1581 aaPredicted RBP21.37■■□□□ 1.01
LRFN3-201ENST00000246529 PI4KAP2A4QPH2 592 aa21.36■■□□□ 1.01
LRFN3-201ENST00000246529 ERC2O15083 957 aa21.36■■□□□ 1.01
LRFN3-201ENST00000246529 PI4KAP1Q8N8J0 262 aa21.36■■□□□ 1.01
LRFN3-201ENST00000246529 SRCIN1Q9C0H9 1055 aa21.36■■□□□ 1.01
LRFN3-201ENST00000246529 NBPF7P0C2Y1 421 aaPredicted RBP21.36■■□□□ 1.01
LRFN3-201ENST00000246529 PROSER2Q86WR7 435 aaPredicted RBP21.36■■□□□ 1.01
LRFN3-201ENST00000246529 ADAMTSL3P82987 1691 aa21.36■■□□□ 1.01
LRFN3-201ENST00000246529 KRT28Q7Z3Y7 464 aa21.35■■□□□ 1.01
LRFN3-201ENST00000246529 PXDNLA1KZ92 1463 aa21.35■■□□□ 1.01
LRFN3-201ENST00000246529 RNMTO43148 476 aaKnown RBP21.35■■□□□ 1.01
LRFN3-201ENST00000246529 PPP1R42Q7Z4L9 355 aa21.35■■□□□ 1.01
LRFN3-201ENST00000246529 EIF5BO60841 1220 aaKnown RBP21.34■■□□□ 1.01
LRFN3-201ENST00000246529 REC8O95072 547 aa21.34■■□□□ 1.01
LRFN3-201ENST00000246529 SSFA2P28290 1259 aa21.34■■□□□ 1.01
LRFN3-201ENST00000246529 RILPL2Q969X0 211 aa21.34■■□□□ 1.01
LRFN3-201ENST00000246529 PRAMEF22A3QJZ6 481 aa21.34■■□□□ 1.01
LRFN3-201ENST00000246529 DDX11L8A8MPP1 907 aa21.34■■□□□ 1.01
LRFN3-201ENST00000246529 C1orf141Q5JVX7 400 aa21.34■■□□□ 1.01
LRFN3-201ENST00000246529 TRIM6-TRIM34B2RNG4 842 aa21.33■■□□□ 1.01
LRFN3-201ENST00000246529 UNC5CLQ8IV45 518 aa21.33■■□□□ 1.01
LRFN3-201ENST00000246529 BEND3Q5T5X7 828 aa21.33■■□□□ 1
LRFN3-201ENST00000246529 NUTM1Q86Y26 1132 aa21.33■■□□□ 1
LRFN3-201ENST00000246529 SSH3Q8TE77 659 aa21.33■■□□□ 1
LRFN3-201ENST00000246529 DNAAF4Q8WXU2 420 aa21.33■■□□□ 1
LRFN3-201ENST00000246529 ZC3H6P61129 1189 aaKnown RBP21.32■■□□□ 1
LRFN3-201ENST00000246529 AMOTQ4VCS5 1084 aa21.32■■□□□ 1
LRFN3-201ENST00000246529 SURF6O75683 361 aaKnown RBP21.32■■□□□ 1
LRFN3-201ENST00000246529 PROSER3Q2NL68 480 aa21.32■■□□□ 1
LRFN3-201ENST00000246529 DDX17Q92841 729 aaKnown RBP21.32■■□□□ 1
LRFN3-201ENST00000246529 SLIT3O75094 1523 aa21.31■■□□□ 1
LRFN3-201ENST00000246529 HOXB7P09629 217 aa21.31■■□□□ 1
LRFN3-201ENST00000246529 PRKCSHP14314 528 aaPredicted RBP21.31■■□□□ 1
LRFN3-201ENST00000246529 ADCY9O60503 1353 aa21.3■■□□□ 1
LRFN3-201ENST00000246529 SRGAP3O43295 1099 aa21.3■■□□□ 1
LRFN3-201ENST00000246529 ESYT1Q9BSJ8 1104 aa21.3■■□□□ 1
LRFN3-201ENST00000246529 KDM3BQ7LBC6 1761 aa21.3■■□□□ 1
LRFN3-201ENST00000246529 PHRF1Q9P1Y6 1649 aaKnown RBP21.3■■□□□ 1
LRFN3-201ENST00000246529 GBP4Q96PP9 640 aa21.3■■□□□ 1
LRFN3-201ENST00000246529 LMO7Q8WWI1 1683 aa21.29■■□□□ 1
LRFN3-201ENST00000246529 STAP2Q9UGK3 403 aa21.29■■□□□ 1
LRFN3-201ENST00000246529 MAP4K4O95819 1239 aaPredicted RBP21.29■■□□□ 1
LRFN3-201ENST00000246529 POLA2Q14181 598 aa21.29■■□□□ 1
LRFN3-201ENST00000246529 CACNA1FO60840 1977 aa21.29■■□□□ 1
LRFN3-201ENST00000246529 CHMLP26374 656 aa21.28■■□□□ 1
LRFN3-201ENST00000246529 GOLGA6L3A6NEY3 463 aa21.28■■□□□ 1
LRFN3-201ENST00000246529 C1orf167Q5SNV9 1468 aa21.28■■□□□ 1
LRFN3-201ENST00000246529 GIGYF1O75420 1035 aaPredicted RBP21.27■■□□□ 1
LRFN3-201ENST00000246529 N4BP2Q86UW6 1770 aaPredicted RBP21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms