RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 UBR1Q8IWV7 1749 aa20.72■□□□□ 0.91
SSPN-201ENST00000242729 BAG4O95429 457 aaKnown RBP20.71■□□□□ 0.91
SSPN-201ENST00000242729 SETD1BQ9UPS6 1966 aaKnown RBP20.71■□□□□ 0.91
SSPN-201ENST00000242729 NUTM1Q86Y26 1132 aa20.7■□□□□ 0.9
SSPN-201ENST00000242729 UNC5CLQ8IV45 518 aa20.7■□□□□ 0.9
SSPN-201ENST00000242729 CIZ1Q9ULV3 898 aaPredicted RBP20.7■□□□□ 0.9
SSPN-201ENST00000242729 SBNO1A3KN83 1393 aa20.7■□□□□ 0.9
SSPN-201ENST00000242729 USP31Q70CQ4 1352 aa20.7■□□□□ 0.9
SSPN-201ENST00000242729 CCT4P50991 539 aaKnown RBP20.7■□□□□ 0.9
SSPN-201ENST00000242729 MRE11P49959 708 aa20.69■□□□□ 0.9
SSPN-201ENST00000242729 NEK4P51957 841 aa20.69■□□□□ 0.9
SSPN-201ENST00000242729 RGPD8O14715 1765 aaPredicted RBP20.69■□□□□ 0.9
SSPN-201ENST00000242729 LMOD2Q6P5Q4 547 aa20.69■□□□□ 0.9
SSPN-201ENST00000242729 IGSF1Q8N6C5 1336 aa20.69■□□□□ 0.9
SSPN-201ENST00000242729 KCNQ3O43525 872 aa20.68■□□□□ 0.9
SSPN-201ENST00000242729 ANO2Q9NQ90 1003 aa20.68■□□□□ 0.9
SSPN-201ENST00000242729 PALD1Q9ULE6 856 aa20.68■□□□□ 0.9
SSPN-201ENST00000242729 ERC2O15083 957 aa20.68■□□□□ 0.9
SSPN-201ENST00000242729 LGR6Q9HBX8 967 aa20.68■□□□□ 0.9
SSPN-201ENST00000242729 ARHGEF10O15013 1369 aa20.68■□□□□ 0.9
SSPN-201ENST00000242729 NRKQ7Z2Y5 1582 aa20.68■□□□□ 0.9
SSPN-201ENST00000242729 KIF24Q5T7B8 1368 aa20.68■□□□□ 0.9
SSPN-201ENST00000242729 CCDC30Q5VVM6 783 aa20.68■□□□□ 0.9
SSPN-201ENST00000242729 LRRCC1Q9C099 1032 aa20.68■□□□□ 0.9
SSPN-201ENST00000242729 HDGFL1Q5TGJ6 251 aa20.67■□□□□ 0.9
SSPN-201ENST00000242729 LRRC59Q96AG4 307 aaKnown RBP20.67■□□□□ 0.9
SSPN-201ENST00000242729 LARP6Q9BRS8 491 aaKnown RBP20.67■□□□□ 0.9
SSPN-201ENST00000242729 UPF3BQ9BZI7 483 aaKnown RBP20.67■□□□□ 0.9
SSPN-201ENST00000242729 CAVIN1Q6NZI2 390 aaKnown RBP20.66■□□□□ 0.9
SSPN-201ENST00000242729 SSH2Q76I76 1423 aa20.66■□□□□ 0.9
SSPN-201ENST00000242729 TTC21AQ8NDW8 1320 aa20.66■□□□□ 0.9
SSPN-201ENST00000242729 IL25Q9H293 177 aa20.66■□□□□ 0.9
SSPN-201ENST00000242729 MX1P20591 662 aa20.65■□□□□ 0.9
SSPN-201ENST00000242729 RBM27Q9P2N5 1060 aaKnown RBP20.65■□□□□ 0.9
SSPN-201ENST00000242729 ST18O60284 1047 aa20.65■□□□□ 0.9
SSPN-201ENST00000242729 PRPF40AO75400 957 aaKnown RBP20.65■□□□□ 0.9
SSPN-201ENST00000242729 REC8O95072 547 aa20.65■□□□□ 0.9
SSPN-201ENST00000242729 GOLGA6L22H0YM25 854 aa20.64■□□□□ 0.9
SSPN-201ENST00000242729 USP44Q9H0E7 712 aa20.64■□□□□ 0.9
SSPN-201ENST00000242729 UBTFL1P0CB47 393 aaPredicted RBP20.63■□□□□ 0.89
SSPN-201ENST00000242729 TAF7Q15545 349 aaPredicted RBP20.63■□□□□ 0.89
SSPN-201ENST00000242729 TBX22Q9Y458 520 aa20.63■□□□□ 0.89
SSPN-201ENST00000242729 KIF13AQ9H1H9 1805 aa20.63■□□□□ 0.89
SSPN-201ENST00000242729 SURF6O75683 361 aaKnown RBP20.63■□□□□ 0.89
SSPN-201ENST00000242729 NBPF6Q5VWK0 638 aa20.63■□□□□ 0.89
SSPN-201ENST00000242729 MPRIPQ6WCQ1 1025 aa20.63■□□□□ 0.89
SSPN-201ENST00000242729 NBPF4Q96M43 638 aa20.63■□□□□ 0.89
SSPN-201ENST00000242729 ERBB4Q15303 1308 aa20.63■□□□□ 0.89
SSPN-201ENST00000242729 NBPF7P0C2Y1 421 aaPredicted RBP20.62■□□□□ 0.89
SSPN-201ENST00000242729 KDRP35968 1356 aa20.62■□□□□ 0.89
SSPN-201ENST00000242729 CHPF2Q9P2E5 772 aa20.61■□□□□ 0.89
SSPN-201ENST00000242729 ZDHHC9Q9Y397 364 aa20.61■□□□□ 0.89
SSPN-201ENST00000242729 ATP8B2P98198 1209 aa20.61■□□□□ 0.89
SSPN-201ENST00000242729 ESCO1Q5FWF5 840 aa20.61■□□□□ 0.89
SSPN-201ENST00000242729 THEMISQ8N1K5 641 aaPredicted RBP20.61■□□□□ 0.89
SSPN-201ENST00000242729 ESYT1Q9BSJ8 1104 aa20.61■□□□□ 0.89
SSPN-201ENST00000242729 GNAI3P08754 354 aa20.6■□□□□ 0.89
SSPN-201ENST00000242729 PPP1R42Q7Z4L9 355 aa20.6■□□□□ 0.89
SSPN-201ENST00000242729 NAP1L5Q96NT1 182 aaPredicted RBP20.59■□□□□ 0.89
SSPN-201ENST00000242729 DIP2AQ14689 1571 aa20.59■□□□□ 0.89
SSPN-201ENST00000242729 MAP3K5Q99683 1374 aa20.59■□□□□ 0.89
SSPN-201ENST00000242729 RGPD1P0DJD0 1748 aa20.59■□□□□ 0.89
SSPN-201ENST00000242729 TMX3Q96JJ7 454 aa20.59■□□□□ 0.89
SSPN-201ENST00000242729 NSFL1CQ9UNZ2 370 aaKnown RBP20.59■□□□□ 0.89
SSPN-201ENST00000242729 SRGAP3O43295 1099 aa20.58■□□□□ 0.89
SSPN-201ENST00000242729 SKOR2Q2VWA4 1001 aaPredicted RBP20.58■□□□□ 0.89
SSPN-201ENST00000242729 TOPAZ1Q8N9V7 1692 aa20.58■□□□□ 0.89
SSPN-201ENST00000242729 PRAMEF22A3QJZ6 481 aa20.58■□□□□ 0.88
SSPN-201ENST00000242729 PI4KAP2A4QPH2 592 aa20.58■□□□□ 0.88
SSPN-201ENST00000242729 CHMLP26374 656 aa20.58■□□□□ 0.88
SSPN-201ENST00000242729 PI4KAP1Q8N8J0 262 aa20.58■□□□□ 0.88
SSPN-201ENST00000242729 TRIM44Q96DX7 344 aaPredicted RBP20.58■□□□□ 0.88
SSPN-201ENST00000242729 PSME1Q06323 249 aa20.57■□□□□ 0.88
SSPN-201ENST00000242729 GDPD2Q9HCC8 539 aa20.57■□□□□ 0.88
SSPN-201ENST00000242729 LMBRD1Q9NUN5 540 aa20.57■□□□□ 0.88
SSPN-201ENST00000242729 PHF8Q9UPP1 1060 aa20.57■□□□□ 0.88
SSPN-201ENST00000242729 PIK3C2AO00443 1686 aa20.56■□□□□ 0.88
SSPN-201ENST00000242729 NUCB2P80303 420 aa20.56■□□□□ 0.88
SSPN-201ENST00000242729 DDX54Q8TDD1 881 aaKnown RBP20.56■□□□□ 0.88
SSPN-201ENST00000242729 NASPP49321 788 aaPredicted RBP20.55■□□□□ 0.88
SSPN-201ENST00000242729 SOS1Q07889 1333 aaPredicted RBP20.55■□□□□ 0.88
SSPN-201ENST00000242729 KLHL40Q2TBA0 621 aa20.55■□□□□ 0.88
SSPN-201ENST00000242729 GPT2Q8TD30 523 aa20.55■□□□□ 0.88
SSPN-201ENST00000242729 OSBPL3Q9H4L5 887 aa20.55■□□□□ 0.88
SSPN-201ENST00000242729 IBTKQ9P2D0 1353 aaPredicted RBP20.54■□□□□ 0.88
SSPN-201ENST00000242729 OS9Q13438 667 aaPredicted RBP20.54■□□□□ 0.88
SSPN-201ENST00000242729 NALCNQ8IZF0 1738 aa20.54■□□□□ 0.88
SSPN-201ENST00000242729 SRCIN1Q9C0H9 1055 aa20.54■□□□□ 0.88
SSPN-201ENST00000242729 SALL3Q9BXA9 1300 aa20.54■□□□□ 0.88
SSPN-201ENST00000242729 CPA1P15085 419 aa20.54■□□□□ 0.88
SSPN-201ENST00000242729 TRHP20396 242 aaPredicted RBP20.54■□□□□ 0.88
SSPN-201ENST00000242729 ZSCAN23Q3MJ62 389 aa20.54■□□□□ 0.88
SSPN-201ENST00000242729 ZNF530Q6P9A1 599 aaPredicted RBP20.53■□□□□ 0.88
SSPN-201ENST00000242729 CYP2E1P05181 493 aaPredicted RBP20.53■□□□□ 0.88
SSPN-201ENST00000242729 SPG7Q9UQ90 795 aa20.53■□□□□ 0.88
SSPN-201ENST00000242729 TEFQ10587 303 aa20.52■□□□□ 0.88
SSPN-201ENST00000242729 PROSER3Q2NL68 480 aa20.52■□□□□ 0.88
SSPN-201ENST00000242729 BTBD11A6QL63 1104 aa20.52■□□□□ 0.88
SSPN-201ENST00000242729 ESPNB1AK53 854 aa20.52■□□□□ 0.88
SSPN-201ENST00000242729 AIMP1Q12904 312 aaKnown RBP20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms