RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 JARID2Q92833 1246 aaPredicted RBP21.55■■□□□ 1.04
CDKN1B-201ENST00000228872 SSH2Q76I76 1423 aa21.54■■□□□ 1.04
CDKN1B-201ENST00000228872 DNTTIP2Q5QJE6 756 aaKnown RBP21.54■■□□□ 1.04
CDKN1B-201ENST00000228872 PRIMPOLQ96LW4 560 aa21.54■■□□□ 1.04
CDKN1B-201ENST00000228872 FOXD4L5Q5VV16 416 aaPredicted RBP21.54■■□□□ 1.04
CDKN1B-201ENST00000228872 C16orf71Q8IYS4 520 aaPredicted RBP21.54■■□□□ 1.04
CDKN1B-201ENST00000228872 FOXD4L4Q8WXT5 416 aaPredicted RBP21.54■■□□□ 1.04
CDKN1B-201ENST00000228872 DIAPH1O60610 1272 aaKnown RBP21.53■■□□□ 1.04
CDKN1B-201ENST00000228872 DCTPP1Q9H773 170 aa21.53■■□□□ 1.04
CDKN1B-201ENST00000228872 NUTM2FA1L443 756 aa21.53■■□□□ 1.04
CDKN1B-201ENST00000228872 TSPYL6Q8N831 410 aa21.53■■□□□ 1.04
CDKN1B-201ENST00000228872 TSC1Q92574 1164 aa21.52■■□□□ 1.04
CDKN1B-201ENST00000228872 PNPLA6Q8IY17 1366 aa21.52■■□□□ 1.04
CDKN1B-201ENST00000228872 LMTK3Q96Q04 1460 aa21.52■■□□□ 1.04
CDKN1B-201ENST00000228872 A0A0U1RQG5 324 aaPredicted RBP21.52■■□□□ 1.04
CDKN1B-201ENST00000228872 GTF2F1P35269 517 aaKnown RBP eCLIP21.52■■□□□ 1.04
CDKN1B-201ENST00000228872 ZBTB7CA1YPR0 619 aa21.52■■□□□ 1.03
CDKN1B-201ENST00000228872 NME9Q86XW9 330 aa21.52■■□□□ 1.03
CDKN1B-201ENST00000228872 AATKQ6ZMQ8 1374 aa21.52■■□□□ 1.03
CDKN1B-201ENST00000228872 TTC21BQ7Z4L5 1316 aa21.51■■□□□ 1.03
CDKN1B-201ENST00000228872 SDSP20132 328 aa21.51■■□□□ 1.03
CDKN1B-201ENST00000228872 PIBF1Q8WXW3 757 aa21.51■■□□□ 1.03
CDKN1B-201ENST00000228872 FBLN1P23142 703 aa21.51■■□□□ 1.03
CDKN1B-201ENST00000228872 HMGN5P82970 282 aaKnown RBP21.51■■□□□ 1.03
CDKN1B-201ENST00000228872 CASC1Q6TDU7 716 aa21.51■■□□□ 1.03
CDKN1B-201ENST00000228872 OTUD7AQ8TE49 926 aaPredicted RBP21.5■■□□□ 1.03
CDKN1B-201ENST00000228872 STRCP1A6NGW2 1772 aa21.5■■□□□ 1.03
CDKN1B-201ENST00000228872 BRD1O95696 1058 aa21.49■■□□□ 1.03
CDKN1B-201ENST00000228872 FCHSD2O94868 740 aa21.49■■□□□ 1.03
CDKN1B-201ENST00000228872 NOLC1Q14978 699 aaKnown RBP eCLIP21.49■■□□□ 1.03
CDKN1B-201ENST00000228872 SYAP1Q96A49 352 aaPredicted RBP21.49■■□□□ 1.03
CDKN1B-201ENST00000228872 OVOS2A0A0J9YW53 1432 aa21.49■■□□□ 1.03
CDKN1B-201ENST00000228872 OVOS2Q6IE36 1432 aa21.49■■□□□ 1.03
CDKN1B-201ENST00000228872 STRCQ7RTU9 1775 aa21.48■■□□□ 1.03
CDKN1B-201ENST00000228872 LRRC7Q96NW7 1537 aa21.48■■□□□ 1.03
CDKN1B-201ENST00000228872 USP54Q70EL1 1684 aa21.48■■□□□ 1.03
CDKN1B-201ENST00000228872 COG3Q96JB2 828 aa21.48■■□□□ 1.03
CDKN1B-201ENST00000228872 TTC21AQ8NDW8 1320 aa21.48■■□□□ 1.03
CDKN1B-201ENST00000228872 REC8O95072 547 aa21.48■■□□□ 1.03
CDKN1B-201ENST00000228872 API5Q9BZZ5 524 aaKnown RBP21.48■■□□□ 1.03
CDKN1B-201ENST00000228872 POLKQ9UBT6 870 aa21.48■■□□□ 1.03
CDKN1B-201ENST00000228872 CBX1P83916 185 aa21.47■■□□□ 1.03
CDKN1B-201ENST00000228872 THUMPD2Q9BTF0 503 aaKnown RBP21.47■■□□□ 1.03
CDKN1B-201ENST00000228872 GTPBP4Q9BZE4 634 aaKnown RBP21.47■■□□□ 1.03
CDKN1B-201ENST00000228872 ELL2O00472 640 aaPredicted RBP21.47■■□□□ 1.03
CDKN1B-201ENST00000228872 PRKAR2BP31323 418 aa21.47■■□□□ 1.03
CDKN1B-201ENST00000228872 TMX3Q96JJ7 454 aa21.47■■□□□ 1.03
CDKN1B-201ENST00000228872 ZNF830Q96NB3 372 aaPredicted RBP21.47■■□□□ 1.03
CDKN1B-201ENST00000228872 MPNDQ8N594 471 aa21.46■■□□□ 1.03
CDKN1B-201ENST00000228872 KIF24Q5T7B8 1368 aa21.46■■□□□ 1.03
CDKN1B-201ENST00000228872 PIK3C2AO00443 1686 aa21.45■■□□□ 1.02
CDKN1B-201ENST00000228872 CDK12Q9NYV4 1490 aaPredicted RBP21.45■■□□□ 1.02
CDKN1B-201ENST00000228872 UVSSAQ2YD98 709 aa21.45■■□□□ 1.02
CDKN1B-201ENST00000228872 ZRANB1Q9UGI0 708 aa21.45■■□□□ 1.02
CDKN1B-201ENST00000228872 ERC2O15083 957 aa21.44■■□□□ 1.02
CDKN1B-201ENST00000228872 ATP2B3Q16720 1220 aa21.44■■□□□ 1.02
CDKN1B-201ENST00000228872 PPP4R3BQ5MIZ7 849 aa21.44■■□□□ 1.02
CDKN1B-201ENST00000228872 NGDNQ8NEJ9 315 aaKnown RBP21.44■■□□□ 1.02
CDKN1B-201ENST00000228872 PHF14O94880 888 aa21.44■■□□□ 1.02
CDKN1B-201ENST00000228872 KIF3AQ9Y496 699 aa21.44■■□□□ 1.02
CDKN1B-201ENST00000228872 GNAI1P63096 354 aa21.43■■□□□ 1.02
CDKN1B-201ENST00000228872 NFE2L2Q16236 605 aa21.43■■□□□ 1.02
CDKN1B-201ENST00000228872 IFT57Q9NWB7 429 aa21.43■■□□□ 1.02
CDKN1B-201ENST00000228872 HSPA2P54652 639 aa21.43■■□□□ 1.02
CDKN1B-201ENST00000228872 C17orf53Q8N3J3 647 aaPredicted RBP21.43■■□□□ 1.02
CDKN1B-201ENST00000228872 ANKRD44Q8N8A2 993 aa21.43■■□□□ 1.02
CDKN1B-201ENST00000228872 FAM184AQ8NB25 1140 aa21.43■■□□□ 1.02
CDKN1B-201ENST00000228872 MBIPQ9NS73 344 aa21.43■■□□□ 1.02
CDKN1B-201ENST00000228872 SPTLC3Q9NUV7 552 aa21.43■■□□□ 1.02
CDKN1B-201ENST00000228872 NEK4P51957 841 aa21.42■■□□□ 1.02
CDKN1B-201ENST00000228872 CUL4AQ13619 759 aa21.42■■□□□ 1.02
CDKN1B-201ENST00000228872 TWISTNBQ3B726 338 aaPredicted RBP21.42■■□□□ 1.02
CDKN1B-201ENST00000228872 TTC12Q9H892 705 aaPredicted RBP21.42■■□□□ 1.02
CDKN1B-201ENST00000228872 USP25Q9UHP3 1055 aa21.42■■□□□ 1.02
CDKN1B-201ENST00000228872 EMILIN1Q9Y6C2 1016 aa21.42■■□□□ 1.02
CDKN1B-201ENST00000228872 USP31Q70CQ4 1352 aa21.42■■□□□ 1.02
CDKN1B-201ENST00000228872 ATP10DQ9P241 1426 aa21.42■■□□□ 1.02
CDKN1B-201ENST00000228872 FKBP5Q13451 457 aaPredicted RBP21.42■■□□□ 1.02
CDKN1B-201ENST00000228872 RBM33Q96EV2 1170 aaKnown RBP21.42■■□□□ 1.02
CDKN1B-201ENST00000228872 MARF1Q9Y4F3 1742 aaKnown RBP21.42■■□□□ 1.02
CDKN1B-201ENST00000228872 FAM177BA6PVY3 158 aa21.42■■□□□ 1.02
CDKN1B-201ENST00000228872 SMARCA5O60264 1052 aaPredicted RBP21.42■■□□□ 1.02
CDKN1B-201ENST00000228872 ZNF853P0CG23 659 aa21.41■■□□□ 1.02
CDKN1B-201ENST00000228872 GADD45BO75293 160 aaPredicted RBP21.41■■□□□ 1.02
CDKN1B-201ENST00000228872 KIF20AO95235 890 aa21.41■■□□□ 1.02
CDKN1B-201ENST00000228872 MCM2P49736 904 aa21.41■■□□□ 1.02
CDKN1B-201ENST00000228872 PROSER2Q86WR7 435 aaPredicted RBP21.41■■□□□ 1.02
CDKN1B-201ENST00000228872 PHACTR3Q96KR7 559 aa21.41■■□□□ 1.02
CDKN1B-201ENST00000228872 BCL2L12Q9HB09 334 aa21.41■■□□□ 1.02
CDKN1B-201ENST00000228872 ADCY5O95622 1261 aa21.4■■□□□ 1.02
CDKN1B-201ENST00000228872 C8orf58Q8NAV2 365 aa21.39■■□□□ 1.01
CDKN1B-201ENST00000228872 PHF8Q9UPP1 1060 aa21.39■■□□□ 1.01
CDKN1B-201ENST00000228872 KIF1AQ12756 1690 aa21.38■■□□□ 1.01
CDKN1B-201ENST00000228872 LETM1O95202 739 aaPredicted RBP21.38■■□□□ 1.01
CDKN1B-201ENST00000228872 CEP85Q6P2H3 762 aa21.38■■□□□ 1.01
CDKN1B-201ENST00000228872 GDPD2Q9HCC8 539 aa21.38■■□□□ 1.01
CDKN1B-201ENST00000228872 APBB1O00213 710 aa21.38■■□□□ 1.01
CDKN1B-201ENST00000228872 C14orf37Q86TY3 774 aa21.38■■□□□ 1.01
CDKN1B-201ENST00000228872 RPAP2Q8IXW5 612 aaPredicted RBP21.38■■□□□ 1.01
CDKN1B-201ENST00000228872 INTS4Q96HW7 963 aaKnown RBP21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms