RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 TSG101Q99816 390 aa15.49■□□□□ 0.07
COL1A1-201ENST00000225964 HFM1A2PYH4 1435 aa15.49■□□□□ 0.07
COL1A1-201ENST00000225964 HECW1Q76N89 1606 aa15.49■□□□□ 0.07
COL1A1-201ENST00000225964 ERICH3Q5RHP9 1530 aa15.49■□□□□ 0.07
COL1A1-201ENST00000225964 EHBP1L1Q8N3D4 1523 aa15.48■□□□□ 0.07
COL1A1-201ENST00000225964 SLC5A1P13866 664 aa15.48■□□□□ 0.07
COL1A1-201ENST00000225964 CCDC150Q8NCX0 1101 aa15.48■□□□□ 0.07
COL1A1-201ENST00000225964 UPF3BQ9BZI7 483 aaKnown RBP15.48■□□□□ 0.07
COL1A1-201ENST00000225964 ANKRD30BQ9BXX2 1392 aa15.48■□□□□ 0.07
COL1A1-201ENST00000225964 SMTNL1A8MU46 457 aa15.48■□□□□ 0.07
COL1A1-201ENST00000225964 EPB41L2O43491 1005 aaKnown RBP15.48■□□□□ 0.07
COL1A1-201ENST00000225964 NUP62CLQ9H1M0 184 aa15.48■□□□□ 0.07
COL1A1-201ENST00000225964 ATAD2Q6PL18 1390 aa15.47■□□□□ 0.07
COL1A1-201ENST00000225964 RANBP6O60518 1105 aaKnown RBP15.47■□□□□ 0.07
COL1A1-201ENST00000225964 MCM10Q7L590 875 aa15.47■□□□□ 0.07
COL1A1-201ENST00000225964 NAPBQ9H115 298 aa15.47■□□□□ 0.07
COL1A1-201ENST00000225964 EHMT1Q9H9B1 1298 aa15.47■□□□□ 0.07
COL1A1-201ENST00000225964 NGLY1Q96IV0 654 aa15.46■□□□□ 0.07
COL1A1-201ENST00000225964 PPP6R1Q9UPN7 881 aa15.46■□□□□ 0.07
COL1A1-201ENST00000225964 TAF3Q5VWG9 929 aa15.46■□□□□ 0.07
COL1A1-201ENST00000225964 NSD3Q9BZ95 1437 aa15.46■□□□□ 0.07
COL1A1-201ENST00000225964 GOLGA6L7A0A1B0GV03 622 aa15.46■□□□□ 0.07
COL1A1-201ENST00000225964 DRC1Q96MC2 740 aa15.46■□□□□ 0.07
COL1A1-201ENST00000225964 TRMT112Q9UI30 125 aaKnown RBP15.46■□□□□ 0.07
COL1A1-201ENST00000225964 KIAA1107Q9UPP5 1409 aa15.46■□□□□ 0.07
COL1A1-201ENST00000225964 ERLIN1O75477 346 aa15.46■□□□□ 0.07
COL1A1-201ENST00000225964 NFE2L2Q16236 605 aa15.46■□□□□ 0.07
COL1A1-201ENST00000225964 HSP90AB3PQ58FF7 597 aa15.46■□□□□ 0.07
COL1A1-201ENST00000225964 DUSP27Q5VZP5 1158 aa15.46■□□□□ 0.07
COL1A1-201ENST00000225964 CETN2P41208 172 aa15.46■□□□□ 0.07
COL1A1-201ENST00000225964 IFIT5Q13325 482 aaKnown RBP15.45■□□□□ 0.06
COL1A1-201ENST00000225964 BOLA2Q9H3K6 86 aa15.45■□□□□ 0.06
COL1A1-201ENST00000225964 U3KPZ7 1027 aaPredicted RBP15.45■□□□□ 0.06
COL1A1-201ENST00000225964 MRC2Q9UBG0 1479 aa15.45■□□□□ 0.06
COL1A1-201ENST00000225964 CAMK4Q16566 473 aa15.45■□□□□ 0.06
COL1A1-201ENST00000225964 LARP1Q6PKG0 1096 aaKnown RBP15.45■□□□□ 0.06
COL1A1-201ENST00000225964 SLF2Q8IX21 1173 aa15.44■□□□□ 0.06
COL1A1-201ENST00000225964 EXOC6BQ9Y2D4 811 aa15.44■□□□□ 0.06
COL1A1-201ENST00000225964 CA8P35219 290 aa15.44■□□□□ 0.06
COL1A1-201ENST00000225964 RBM10P98175 930 aaKnown RBP15.44■□□□□ 0.06
COL1A1-201ENST00000225964 MAP3K12Q12852 859 aa15.44■□□□□ 0.06
COL1A1-201ENST00000225964 CCDC148Q8NFR7 591 aa15.44■□□□□ 0.06
COL1A1-201ENST00000225964 SMARCA5O60264 1052 aaPredicted RBP15.44■□□□□ 0.06
COL1A1-201ENST00000225964 EIF3JO75822 258 aaKnown RBP15.44■□□□□ 0.06
COL1A1-201ENST00000225964 SLC4A8Q2Y0W8 1093 aa15.44■□□□□ 0.06
COL1A1-201ENST00000225964 SUPT6HQ7KZ85 1726 aaKnown RBP15.44■□□□□ 0.06
COL1A1-201ENST00000225964 C6orf229H3BNL8 230 aa15.44■□□□□ 0.06
COL1A1-201ENST00000225964 WAPLQ7Z5K2 1190 aa15.43■□□□□ 0.06
COL1A1-201ENST00000225964 FCHSD2O94868 740 aa15.43■□□□□ 0.06
COL1A1-201ENST00000225964 CCDC83Q8IWF9 413 aa15.43■□□□□ 0.06
COL1A1-201ENST00000225964 FERMT2Q96AC1 680 aa15.43■□□□□ 0.06
COL1A1-201ENST00000225964 RPGRIP1LQ68CZ1 1315 aa15.43■□□□□ 0.06
COL1A1-201ENST00000225964 CCDC91Q7Z6B0 441 aa15.43■□□□□ 0.06
COL1A1-201ENST00000225964 ANKRD18BA2A2Z9 1011 aa15.43■□□□□ 0.06
COL1A1-201ENST00000225964 TMEM266Q2M3C6 531 aa15.43■□□□□ 0.06
COL1A1-201ENST00000225964 CFAP100Q494V2 611 aa15.43■□□□□ 0.06
COL1A1-201ENST00000225964 FKBP15Q5T1M5 1219 aa15.43■□□□□ 0.06
COL1A1-201ENST00000225964 KLHL10Q6JEL2 608 aa15.43■□□□□ 0.06
COL1A1-201ENST00000225964 KIF1BPQ96EK5 621 aa15.43■□□□□ 0.06
COL1A1-201ENST00000225964 TRMT1LQ7Z2T5 733 aaKnown RBP15.43■□□□□ 0.06
COL1A1-201ENST00000225964 CCDC82Q8N4S0 544 aa15.43■□□□□ 0.06
COL1A1-201ENST00000225964 CTCFLQ8NI51 663 aaPredicted RBP15.43■□□□□ 0.06
COL1A1-201ENST00000225964 EPRSP07814 1512 aaKnown RBP15.43■□□□□ 0.06
COL1A1-201ENST00000225964 SPA17Q15506 151 aa15.43■□□□□ 0.06
COL1A1-201ENST00000225964 ZNF622Q969S3 477 aaKnown RBP eCLIP15.43■□□□□ 0.06
COL1A1-201ENST00000225964 FEZ1Q99689 392 aa15.43■□□□□ 0.06
COL1A1-201ENST00000225964 RAB11FIP3O75154 756 aa15.42■□□□□ 0.06
COL1A1-201ENST00000225964 PRPF40BQ6NWY9 871 aaKnown RBP15.42■□□□□ 0.06
COL1A1-201ENST00000225964 CACNA2D4Q7Z3S7 1137 aa15.42■□□□□ 0.06
COL1A1-201ENST00000225964 MTERF4Q7Z6M4 381 aaKnown RBP15.42■□□□□ 0.06
COL1A1-201ENST00000225964 AKNAQ7Z591 1439 aa15.42■□□□□ 0.06
COL1A1-201ENST00000225964 SNAPC4Q5SXM2 1469 aa15.42■□□□□ 0.06
COL1A1-201ENST00000225964 SSRP1Q08945 709 aaKnown RBP15.42■□□□□ 0.06
COL1A1-201ENST00000225964 CCDC66A2RUB6 948 aa15.42■□□□□ 0.06
COL1A1-201ENST00000225964 GPTP24298 496 aa15.42■□□□□ 0.06
COL1A1-201ENST00000225964 CTNNBL1Q8WYA6 563 aaPredicted RBP15.42■□□□□ 0.06
COL1A1-201ENST00000225964 SLC12A7Q9Y666 1083 aa15.42■□□□□ 0.06
COL1A1-201ENST00000225964 CCDC178Q5BJE1 867 aa15.42■□□□□ 0.06
COL1A1-201ENST00000225964 TMEM57Q8N5G2 664 aa15.42■□□□□ 0.06
COL1A1-201ENST00000225964 GUCY1B3Q02153 619 aa15.41■□□□□ 0.06
COL1A1-201ENST00000225964 CCDC113Q9H0I3 377 aa15.41■□□□□ 0.06
COL1A1-201ENST00000225964 NLRP5P59047 1200 aa15.41■□□□□ 0.06
COL1A1-201ENST00000225964 FILIP1Q7Z7B0 1213 aa15.41■□□□□ 0.06
COL1A1-201ENST00000225964 IQCA1Q86XH1 822 aa15.41■□□□□ 0.06
COL1A1-201ENST00000225964 GOPCQ9HD26 462 aa15.41■□□□□ 0.06
COL1A1-201ENST00000225964 ARHGAP29Q52LW3 1261 aa15.41■□□□□ 0.06
COL1A1-201ENST00000225964 THUMPD2Q9BTF0 503 aaKnown RBP15.41■□□□□ 0.06
COL1A1-201ENST00000225964 TMPOP42166 694 aaKnown RBP15.4■□□□□ 0.06
COL1A1-201ENST00000225964 CCDC102AQ96A19 550 aa15.4■□□□□ 0.06
COL1A1-201ENST00000225964 ZNF213O14771 459 aa15.4■□□□□ 0.06
COL1A1-201ENST00000225964 BAG4O95429 457 aaKnown RBP15.4■□□□□ 0.06
COL1A1-201ENST00000225964 CCDC8Q9H0W5 538 aaPredicted RBP15.4■□□□□ 0.06
COL1A1-201ENST00000225964 EXOC5O00471 708 aa15.4■□□□□ 0.06
COL1A1-201ENST00000225964 TAF7Q15545 349 aaPredicted RBP15.39■□□□□ 0.06
COL1A1-201ENST00000225964 PSMD1Q99460 953 aa15.39■□□□□ 0.06
COL1A1-201ENST00000225964 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.39■□□□□ 0.06
COL1A1-201ENST00000225964 TNNT1P13805 278 aa15.39■□□□□ 0.05
COL1A1-201ENST00000225964 GRM1Q13255 1194 aa15.39■□□□□ 0.05
COL1A1-201ENST00000225964 AMOTQ4VCS5 1084 aa15.39■□□□□ 0.05
COL1A1-201ENST00000225964 RPAP2Q8IXW5 612 aaPredicted RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms