RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 FKBP5Q13451 457 aaPredicted RBP27.1■■□□□ 1.93
SMARCD2-201ENST00000225742 KCNH5Q8NCM2 988 aa27.09■■□□□ 1.93
SMARCD2-201ENST00000225742 ADGRL3Q9HAR2 1447 aa27.09■■□□□ 1.93
SMARCD2-201ENST00000225742 MED1Q15648 1581 aaPredicted RBP27.09■■□□□ 1.93
SMARCD2-201ENST00000225742 CEMIPQ8WUJ3 1361 aa27.09■■□□□ 1.93
SMARCD2-201ENST00000225742 TNPO1Q92973 898 aaKnown RBP27.08■■□□□ 1.93
SMARCD2-201ENST00000225742 CD2BP2O95400 341 aaKnown RBP27.07■■□□□ 1.92
SMARCD2-201ENST00000225742 HOXB7P09629 217 aa27.07■■□□□ 1.92
SMARCD2-201ENST00000225742 PDE1AP54750 535 aa27.07■■□□□ 1.92
SMARCD2-201ENST00000225742 LTV1Q96GA3 475 aaPredicted RBP27.06■■□□□ 1.92
SMARCD2-201ENST00000225742 FSD2A1L4K1 749 aa27.06■■□□□ 1.92
SMARCD2-201ENST00000225742 SKOR2Q2VWA4 1001 aaPredicted RBP27.05■■□□□ 1.92
SMARCD2-201ENST00000225742 RBM42Q9BTD8 480 aaKnown RBP27.05■■□□□ 1.92
SMARCD2-201ENST00000225742 LRRCC1Q9C099 1032 aa27.05■■□□□ 1.92
SMARCD2-201ENST00000225742 ISY1Q9ULR0 285 aaKnown RBP27.05■■□□□ 1.92
SMARCD2-201ENST00000225742 APBB1O00213 710 aa27.04■■□□□ 1.92
SMARCD2-201ENST00000225742 ERC2O15083 957 aa27.04■■□□□ 1.92
SMARCD2-201ENST00000225742 C14orf37Q86TY3 774 aa27.04■■□□□ 1.92
SMARCD2-201ENST00000225742 SALL3Q9BXA9 1300 aa27.04■■□□□ 1.92
SMARCD2-201ENST00000225742 GOLGA6L3A6NEY3 463 aa27.04■■□□□ 1.92
SMARCD2-201ENST00000225742 CLEC17AQ6ZS10 378 aa27.04■■□□□ 1.92
SMARCD2-201ENST00000225742 LMO7Q8WWI1 1683 aa27.04■■□□□ 1.92
SMARCD2-201ENST00000225742 KDM3BQ7LBC6 1761 aa27.03■■□□□ 1.92
SMARCD2-201ENST00000225742 TUBGCP6Q96RT7 1819 aa27.03■■□□□ 1.92
SMARCD2-201ENST00000225742 SRCIN1Q9C0H9 1055 aa27.03■■□□□ 1.92
SMARCD2-201ENST00000225742 IBTKQ9P2D0 1353 aaPredicted RBP27.03■■□□□ 1.92
SMARCD2-201ENST00000225742 PSME1Q06323 249 aa27.02■■□□□ 1.92
SMARCD2-201ENST00000225742 HDGFL1Q5TGJ6 251 aa27.02■■□□□ 1.92
SMARCD2-201ENST00000225742 AOX1Q06278 1338 aa27.01■■□□□ 1.91
SMARCD2-201ENST00000225742 STAP2Q9UGK3 403 aa27■■□□□ 1.91
SMARCD2-201ENST00000225742 ST18O60284 1047 aa27■■□□□ 1.91
SMARCD2-201ENST00000225742 OVOS2A0A0G2JMS6 1433 aa26.99■■□□□ 1.91
SMARCD2-201ENST00000225742 NBPF6Q5VWK0 638 aa26.98■■□□□ 1.91
SMARCD2-201ENST00000225742 NBPF4Q96M43 638 aa26.98■■□□□ 1.91
SMARCD2-201ENST00000225742 USP44Q9H0E7 712 aa26.98■■□□□ 1.91
SMARCD2-201ENST00000225742 EXOC6BQ9Y2D4 811 aa26.98■■□□□ 1.91
SMARCD2-201ENST00000225742 NCAPD2Q15021 1401 aa26.98■■□□□ 1.91
SMARCD2-201ENST00000225742 SETD1BQ9UPS6 1966 aaKnown RBP26.98■■□□□ 1.91
SMARCD2-201ENST00000225742 UBTFL1P0CB47 393 aaPredicted RBP26.97■■□□□ 1.91
SMARCD2-201ENST00000225742 EIF4A1P60842 406 aaKnown RBP26.97■■□□□ 1.91
SMARCD2-201ENST00000225742 PLEKHO1Q53GL0 409 aaPredicted RBP26.97■■□□□ 1.91
SMARCD2-201ENST00000225742 USHBP1Q8N6Y0 703 aa26.97■■□□□ 1.91
SMARCD2-201ENST00000225742 CWC22Q9HCG8 908 aaKnown RBP26.97■■□□□ 1.91
SMARCD2-201ENST00000225742 SLIT3O75094 1523 aa26.97■■□□□ 1.91
SMARCD2-201ENST00000225742 RAB11FIP3O75154 756 aa26.97■■□□□ 1.91
SMARCD2-201ENST00000225742 MX1P20591 662 aa26.97■■□□□ 1.91
SMARCD2-201ENST00000225742 AMOTQ4VCS5 1084 aa26.97■■□□□ 1.91
SMARCD2-201ENST00000225742 AKAP4Q5JQC9 854 aa26.97■■□□□ 1.91
SMARCD2-201ENST00000225742 LRRFIP2Q9Y608 721 aaKnown RBP26.97■■□□□ 1.91
SMARCD2-201ENST00000225742 PNMA6EA0A0J9YXQ4 647 aa26.96■■□□□ 1.91
SMARCD2-201ENST00000225742 NUCB2P80303 420 aa26.96■■□□□ 1.91
SMARCD2-201ENST00000225742 ESCO1Q5FWF5 840 aa26.96■■□□□ 1.91
SMARCD2-201ENST00000225742 SSH3Q8TE77 659 aa26.96■■□□□ 1.91
SMARCD2-201ENST00000225742 NECTIN2Q92692 538 aa26.96■■□□□ 1.91
SMARCD2-201ENST00000225742 GOLGA6L22H0YM25 854 aa26.95■■□□□ 1.9
SMARCD2-201ENST00000225742 ADAMTSL3P82987 1691 aa26.94■■□□□ 1.9
SMARCD2-201ENST00000225742 EPB41L2O43491 1005 aaKnown RBP26.93■■□□□ 1.9
SMARCD2-201ENST00000225742 FAM43AQ8N2R8 423 aa26.93■■□□□ 1.9
SMARCD2-201ENST00000225742 NPHP4O75161 1426 aaPredicted RBP26.93■■□□□ 1.9
SMARCD2-201ENST00000225742 MRE11P49959 708 aa26.93■■□□□ 1.9
SMARCD2-201ENST00000225742 LMTK3Q96Q04 1460 aa26.92■■□□□ 1.9
SMARCD2-201ENST00000225742 POLA2Q14181 598 aa26.92■■□□□ 1.9
SMARCD2-201ENST00000225742 ESYT1Q9BSJ8 1104 aa26.92■■□□□ 1.9
SMARCD2-201ENST00000225742 GZF1Q9H116 711 aaPredicted RBP26.92■■□□□ 1.9
SMARCD2-201ENST00000225742 FOXD4L1Q9NU39 408 aa26.92■■□□□ 1.9
SMARCD2-201ENST00000225742 RGPD2P0DJD1 1756 aa26.91■■□□□ 1.9
SMARCD2-201ENST00000225742 MCCP23508 829 aa26.91■■□□□ 1.9
SMARCD2-201ENST00000225742 CAMTA1Q9Y6Y1 1673 aa26.91■■□□□ 1.9
SMARCD2-201ENST00000225742 XRCC6P12956 609 aaKnown RBP eCLIP26.9■■□□□ 1.9
SMARCD2-201ENST00000225742 ZNF530Q6P9A1 599 aaPredicted RBP26.9■■□□□ 1.9
SMARCD2-201ENST00000225742 TRHP20396 242 aaPredicted RBP26.9■■□□□ 1.9
SMARCD2-201ENST00000225742 MCM2P49736 904 aa26.9■■□□□ 1.9
SMARCD2-201ENST00000225742 ANAPC15P60006 121 aa26.9■■□□□ 1.9
SMARCD2-201ENST00000225742 TEFQ10587 303 aa26.9■■□□□ 1.9
SMARCD2-201ENST00000225742 ARHGEF25Q86VW2 580 aa26.9■■□□□ 1.9
SMARCD2-201ENST00000225742 PHAXQ9H814 394 aaKnown RBP26.9■■□□□ 1.9
SMARCD2-201ENST00000225742 LGR6Q9HBX8 967 aa26.9■■□□□ 1.9
SMARCD2-201ENST00000225742 SSFA2P28290 1259 aa26.89■■□□□ 1.9
SMARCD2-201ENST00000225742 IL17RAQ96F46 866 aa26.89■■□□□ 1.9
SMARCD2-201ENST00000225742 DNAAF4Q8WXU2 420 aa26.88■■□□□ 1.89
SMARCD2-201ENST00000225742 RTN4Q9NQC3 1192 aaKnown RBP26.88■■□□□ 1.89
SMARCD2-201ENST00000225742 CYP2E1P05181 493 aaPredicted RBP26.87■■□□□ 1.89
SMARCD2-201ENST00000225742 CHMLP26374 656 aa26.87■■□□□ 1.89
SMARCD2-201ENST00000225742 KIF1AQ12756 1690 aa26.87■■□□□ 1.89
SMARCD2-201ENST00000225742 BTBD11A6QL63 1104 aa26.86■■□□□ 1.89
SMARCD2-201ENST00000225742 GCP02774 474 aa26.86■■□□□ 1.89
SMARCD2-201ENST00000225742 HSP90AB4PQ58FF6 505 aa26.86■■□□□ 1.89
SMARCD2-201ENST00000225742 BEND3Q5T5X7 828 aa26.86■■□□□ 1.89
SMARCD2-201ENST00000225742 MST1RQ04912 1400 aa26.86■■□□□ 1.89
SMARCD2-201ENST00000225742 TRPM3Q9HCF6 1732 aaPredicted RBP26.86■■□□□ 1.89
SMARCD2-201ENST00000225742 RNMTO43148 476 aaKnown RBP26.86■■□□□ 1.89
SMARCD2-201ENST00000225742 BAG4O95429 457 aaKnown RBP26.86■■□□□ 1.89
SMARCD2-201ENST00000225742 C1orf141Q5JVX7 400 aa26.86■■□□□ 1.89
SMARCD2-201ENST00000225742 EIF2S2P20042 333 aaKnown RBP26.85■■□□□ 1.89
SMARCD2-201ENST00000225742 PPP1R42Q7Z4L9 355 aa26.85■■□□□ 1.89
SMARCD2-201ENST00000225742 CHPF2Q9P2E5 772 aa26.85■■□□□ 1.89
SMARCD2-201ENST00000225742 HDAC5Q9UQL6 1122 aa26.85■■□□□ 1.89
SMARCD2-201ENST00000225742 TRIM6-TRIM34B2RNG4 842 aa26.83■■□□□ 1.89
SMARCD2-201ENST00000225742 KIF1BPQ96EK5 621 aa26.83■■□□□ 1.89
SMARCD2-201ENST00000225742 DBF4Q9UBU7 674 aaPredicted RBP26.83■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms