RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 TWISTNBQ3B726 338 aaPredicted RBP31.1■■■□□ 2.57
RUNDC3A-201ENST00000225441 WDR17Q8IZU2 1322 aa31.1■■■□□ 2.57
RUNDC3A-201ENST00000225441 MFAP1P55081 439 aaKnown RBP31.1■■■□□ 2.57
RUNDC3A-201ENST00000225441 SNX21Q969T3 373 aa31.09■■■□□ 2.57
RUNDC3A-201ENST00000225441 SLKQ9H2G2 1235 aaPredicted RBP31.09■■■□□ 2.57
RUNDC3A-201ENST00000225441 THUMPD2Q9BTF0 503 aaKnown RBP31.08■■■□□ 2.57
RUNDC3A-201ENST00000225441 CHMP5Q9NZZ3 219 aa31.08■■■□□ 2.57
RUNDC3A-201ENST00000225441 DCTN1Q14203 1278 aa31.05■■■□□ 2.56
RUNDC3A-201ENST00000225441 HSCBQ8IWL3 235 aa31.05■■■□□ 2.56
RUNDC3A-201ENST00000225441 TSPYL6Q8N831 410 aa31.05■■■□□ 2.56
RUNDC3A-201ENST00000225441 JCADQ9P266 1359 aa31.04■■■□□ 2.56
RUNDC3A-201ENST00000225441 PLEKHO1Q53GL0 409 aaPredicted RBP31.04■■■□□ 2.56
RUNDC3A-201ENST00000225441 HTATSF1O43719 755 aaKnown RBP31.03■■■□□ 2.56
RUNDC3A-201ENST00000225441 AMOTQ4VCS5 1084 aa31.03■■■□□ 2.56
RUNDC3A-201ENST00000225441 LNPKQ9C0E8 428 aa31.03■■■□□ 2.56
RUNDC3A-201ENST00000225441 MAP3K5Q99683 1374 aa31.03■■■□□ 2.56
RUNDC3A-201ENST00000225441 RAPGEF4Q8WZA2 1011 aa31.03■■■□□ 2.56
RUNDC3A-201ENST00000225441 GNAT3A8MTJ3 354 aa31.02■■■□□ 2.56
RUNDC3A-201ENST00000225441 TOM1L2Q6ZVM7 507 aa31.02■■■□□ 2.56
RUNDC3A-201ENST00000225441 MCM10Q7L590 875 aa31.02■■■□□ 2.56
RUNDC3A-201ENST00000225441 RTF1Q92541 710 aaKnown RBP31.02■■■□□ 2.56
RUNDC3A-201ENST00000225441 BTG4Q9NY30 223 aa31.02■■■□□ 2.56
RUNDC3A-201ENST00000225441 EVA1CP58658 441 aa31.01■■■□□ 2.56
RUNDC3A-201ENST00000225441 STRN4Q9NRL3 753 aa31.01■■■□□ 2.56
RUNDC3A-201ENST00000225441 PLEKHG2Q9H7P9 1386 aa31.01■■■□□ 2.55
RUNDC3A-201ENST00000225441 MEGF6O75095 1541 aa31■■■□□ 2.55
RUNDC3A-201ENST00000225441 ANKRD45Q5TZF3 282 aa31■■■□□ 2.55
RUNDC3A-201ENST00000225441 NUTM2BA6NNL0 878 aaPredicted RBP30.99■■■□□ 2.55
RUNDC3A-201ENST00000225441 NUTM2EB1AL46 878 aaPredicted RBP30.99■■■□□ 2.55
RUNDC3A-201ENST00000225441 ADAMTS2O95450 1211 aa30.99■■■□□ 2.55
RUNDC3A-201ENST00000225441 TATP17735 454 aaPredicted RBP30.99■■■□□ 2.55
RUNDC3A-201ENST00000225441 L1TD1Q5T7N2 865 aaKnown RBP30.99■■■□□ 2.55
RUNDC3A-201ENST00000225441 NUTM2AQ8IVF1 878 aaPredicted RBP30.99■■■□□ 2.55
RUNDC3A-201ENST00000225441 C8orf58Q8NAV2 365 aa30.99■■■□□ 2.55
RUNDC3A-201ENST00000225441 INTS3Q68E01 1043 aaKnown RBP30.98■■■□□ 2.55
RUNDC3A-201ENST00000225441 LARP1Q6PKG0 1096 aaKnown RBP30.98■■■□□ 2.55
RUNDC3A-201ENST00000225441 IL27Q8NEV9 243 aa30.98■■■□□ 2.55
RUNDC3A-201ENST00000225441 CARD10Q9BWT7 1032 aa30.98■■■□□ 2.55
RUNDC3A-201ENST00000225441 ZNF530Q6P9A1 599 aaPredicted RBP30.98■■■□□ 2.55
RUNDC3A-201ENST00000225441 CIZ1Q9ULV3 898 aaPredicted RBP30.97■■■□□ 2.55
RUNDC3A-201ENST00000225441 PLCH1Q4KWH8 1693 aa30.97■■■□□ 2.55
RUNDC3A-201ENST00000225441 CRB1P82279 1406 aa30.96■■■□□ 2.55
RUNDC3A-201ENST00000225441 LRRC37A3O60309 1634 aa30.96■■■□□ 2.55
RUNDC3A-201ENST00000225441 CHL1O00533 1208 aa30.96■■■□□ 2.55
RUNDC3A-201ENST00000225441 MCM4P33991 863 aa30.95■■■□□ 2.55
RUNDC3A-201ENST00000225441 AKAP4Q5JQC9 854 aa30.95■■■□□ 2.55
RUNDC3A-201ENST00000225441 SIRT2Q8IXJ6 389 aa30.94■■■□□ 2.54
RUNDC3A-201ENST00000225441 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.94■■■□□ 2.54
RUNDC3A-201ENST00000225441 PTPRCP08575 1304 aa30.93■■■□□ 2.54
RUNDC3A-201ENST00000225441 HSPA1LP34931 641 aa30.92■■■□□ 2.54
RUNDC3A-201ENST00000225441 DCTPP1Q9H773 170 aa30.92■■■□□ 2.54
RUNDC3A-201ENST00000225441 PARP4Q9UKK3 1724 aaKnown RBP30.92■■■□□ 2.54
RUNDC3A-201ENST00000225441 C1orf141Q5JVX7 400 aa30.91■■■□□ 2.54
RUNDC3A-201ENST00000225441 IL17REQ8NFR9 667 aa30.91■■■□□ 2.54
RUNDC3A-201ENST00000225441 SPG7Q9UQ90 795 aa30.91■■■□□ 2.54
RUNDC3A-201ENST00000225441 OVOS2A0A0G2JMS6 1433 aa30.91■■■□□ 2.54
RUNDC3A-201ENST00000225441 PKD1L3Q7Z443 1732 aa30.91■■■□□ 2.54
RUNDC3A-201ENST00000225441 RPAP2Q8IXW5 612 aaPredicted RBP30.91■■■□□ 2.54
RUNDC3A-201ENST00000225441 DDIT3P35638 169 aa30.9■■■□□ 2.54
RUNDC3A-201ENST00000225441 SPATA31A6Q5VVP1 1343 aa30.9■■■□□ 2.54
RUNDC3A-201ENST00000225441 BRPF3Q9ULD4 1205 aa30.89■■■□□ 2.54
RUNDC3A-201ENST00000225441 NRAPQ86VF7 1730 aa30.89■■■□□ 2.54
RUNDC3A-201ENST00000225441 ELL2O00472 640 aaPredicted RBP30.89■■■□□ 2.53
RUNDC3A-201ENST00000225441 CEMIPQ8WUJ3 1361 aa30.88■■■□□ 2.53
RUNDC3A-201ENST00000225441 DDX11L8A8MPP1 907 aa30.88■■■□□ 2.53
RUNDC3A-201ENST00000225441 CDC45O75419 566 aa30.88■■■□□ 2.53
RUNDC3A-201ENST00000225441 IL2RBP14784 551 aa30.87■■■□□ 2.53
RUNDC3A-201ENST00000225441 PTMSP20962 102 aa30.87■■■□□ 2.53
RUNDC3A-201ENST00000225441 ANKRD44Q8N8A2 993 aa30.87■■■□□ 2.53
RUNDC3A-201ENST00000225441 NWD2Q9ULI1 1742 aa30.86■■■□□ 2.53
RUNDC3A-201ENST00000225441 SLIT2O94813 1529 aa30.86■■■□□ 2.53
RUNDC3A-201ENST00000225441 ILDR1Q86SU0 546 aaPredicted RBP30.85■■■□□ 2.53
RUNDC3A-201ENST00000225441 C1orf115Q9H7X2 142 aa30.85■■■□□ 2.53
RUNDC3A-201ENST00000225441 TBC1D9Q6ZT07 1266 aa30.84■■■□□ 2.53
RUNDC3A-201ENST00000225441 LGR6Q9HBX8 967 aa30.84■■■□□ 2.53
RUNDC3A-201ENST00000225441 MPRIPQ6WCQ1 1025 aa30.84■■■□□ 2.53
RUNDC3A-201ENST00000225441 RGS12O14924 1447 aa30.84■■■□□ 2.53
RUNDC3A-201ENST00000225441 PHKG2P15735 406 aa30.83■■■□□ 2.53
RUNDC3A-201ENST00000225441 ADAMTS7Q9UKP4 1686 aa30.83■■■□□ 2.53
RUNDC3A-201ENST00000225441 RNMTO43148 476 aaKnown RBP30.82■■■□□ 2.52
RUNDC3A-201ENST00000225441 LRP6O75581 1613 aa30.82■■■□□ 2.52
RUNDC3A-201ENST00000225441 IFNL2Q8IZJ0 200 aa30.82■■■□□ 2.52
RUNDC3A-201ENST00000225441 ISY1Q9ULR0 285 aaKnown RBP30.82■■■□□ 2.52
RUNDC3A-201ENST00000225441 ZCRB1Q8TBF4 217 aaKnown RBP30.8■■■□□ 2.52
RUNDC3A-201ENST00000225441 KIF2CQ99661 725 aa30.8■■■□□ 2.52
RUNDC3A-201ENST00000225441 ATP10DQ9P241 1426 aa30.8■■■□□ 2.52
RUNDC3A-201ENST00000225441 TAF7Q15545 349 aaPredicted RBP30.8■■■□□ 2.52
RUNDC3A-201ENST00000225441 PLEKHM2Q8IWE5 1019 aa30.8■■■□□ 2.52
RUNDC3A-201ENST00000225441 BABAM1Q9NWV8 329 aa30.8■■■□□ 2.52
RUNDC3A-201ENST00000225441 TSPYL4Q9UJ04 414 aa30.8■■■□□ 2.52
RUNDC3A-201ENST00000225441 CYP27B1O15528 508 aa30.79■■■□□ 2.52
RUNDC3A-201ENST00000225441 MIS18AQ9NYP9 233 aa30.79■■■□□ 2.52
RUNDC3A-201ENST00000225441 HSP90AB1P08238 724 aaKnown RBP30.78■■■□□ 2.52
RUNDC3A-201ENST00000225441 DISP2A7MBM2 1401 aa30.78■■■□□ 2.52
RUNDC3A-201ENST00000225441 C8orf37Q96NL8 207 aa30.77■■■□□ 2.52
RUNDC3A-201ENST00000225441 PCDH11XQ9BZA7 1347 aa30.77■■■□□ 2.52
RUNDC3A-201ENST00000225441 PCDH11YQ9BZA8 1340 aa30.77■■■□□ 2.52
RUNDC3A-201ENST00000225441 TEFQ10587 303 aa30.77■■■□□ 2.52
RUNDC3A-201ENST00000225441 SOS1Q07889 1333 aaPredicted RBP30.76■■■□□ 2.52
RUNDC3A-201ENST00000225441 FSD2A1L4K1 749 aa30.76■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms