RNA–Protein interactions for RNA: ENST00000225308.12

SLC25A39-201, Transcript of solute carrier family 25 member 39, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLC25A39, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A39-201ENST00000225308 PALLDQ8WX93 1383 aa28.77■■■□□ 2.2
SLC25A39-201ENST00000225308 ASAP1Q9ULH1 1129 aa28.77■■■□□ 2.2
SLC25A39-201ENST00000225308 PAPPAQ13219 1627 aa28.77■■■□□ 2.2
SLC25A39-201ENST00000225308 HTATSF1O43719 755 aaKnown RBP28.75■■■□□ 2.19
SLC25A39-201ENST00000225308 TMPOP42166 694 aaKnown RBP28.75■■■□□ 2.19
SLC25A39-201ENST00000225308 MCM10Q7L590 875 aa28.75■■■□□ 2.19
SLC25A39-201ENST00000225308 RTF1Q92541 710 aaKnown RBP28.74■■■□□ 2.19
SLC25A39-201ENST00000225308 ATG3Q9NT62 314 aa28.74■■■□□ 2.19
SLC25A39-201ENST00000225308 DCTN1Q14203 1278 aa28.73■■■□□ 2.19
SLC25A39-201ENST00000225308 SMARCC1Q92922 1105 aaPredicted RBP28.73■■■□□ 2.19
SLC25A39-201ENST00000225308 LRRC4BQ9NT99 713 aa28.72■■■□□ 2.19
SLC25A39-201ENST00000225308 TAF1LQ8IZX4 1826 aa28.72■■■□□ 2.19
SLC25A39-201ENST00000225308 RRP7AQ9Y3A4 280 aaKnown RBP28.72■■■□□ 2.19
SLC25A39-201ENST00000225308 CCER2I3L3R5 266 aa28.71■■■□□ 2.19
SLC25A39-201ENST00000225308 RIPK4P57078 832 aa28.71■■■□□ 2.19
SLC25A39-201ENST00000225308 TEFQ10587 303 aa28.71■■■□□ 2.19
SLC25A39-201ENST00000225308 MIER1Q8N108 512 aa28.7■■■□□ 2.19
SLC25A39-201ENST00000225308 UBR2Q8IWV8 1755 aa28.7■■■□□ 2.18
SLC25A39-201ENST00000225308 KCNQ4P56696 695 aa28.69■■■□□ 2.18
SLC25A39-201ENST00000225308 SLC27A3Q5K4L6 730 aa28.69■■■□□ 2.18
SLC25A39-201ENST00000225308 C5P01031 1676 aa28.69■■■□□ 2.18
SLC25A39-201ENST00000225308 ZNF831Q5JPB2 1677 aa28.68■■■□□ 2.18
SLC25A39-201ENST00000225308 APAF1O14727 1248 aa28.68■■■□□ 2.18
SLC25A39-201ENST00000225308 NEUROD2Q15784 382 aa28.68■■■□□ 2.18
SLC25A39-201ENST00000225308 CCNL1Q9UK58 526 aaPredicted RBP28.68■■■□□ 2.18
SLC25A39-201ENST00000225308 FAM9BQ8IZU0 186 aa28.67■■■□□ 2.18
SLC25A39-201ENST00000225308 THUMPD2Q9BTF0 503 aaKnown RBP28.66■■■□□ 2.18
SLC25A39-201ENST00000225308 LOC102724428A0A0B4J2F2 783 aa28.65■■■□□ 2.18
SLC25A39-201ENST00000225308 SIK1P57059 783 aa28.65■■■□□ 2.18
SLC25A39-201ENST00000225308 SLC39A6Q13433 755 aa28.65■■■□□ 2.18
SLC25A39-201ENST00000225308 ANO8Q9HCE9 1232 aaPredicted RBP28.65■■■□□ 2.18
SLC25A39-201ENST00000225308 KCPQ6ZWJ8 1503 aa28.65■■■□□ 2.18
SLC25A39-201ENST00000225308 SLC4A9Q96Q91 983 aa28.64■■■□□ 2.18
SLC25A39-201ENST00000225308 TRIM35Q9UPQ4 493 aa28.64■■■□□ 2.18
SLC25A39-201ENST00000225308 CICQ96RK0 1608 aaPredicted RBP28.63■■■□□ 2.17
SLC25A39-201ENST00000225308 LMOD3Q0VAK6 560 aa28.63■■■□□ 2.17
SLC25A39-201ENST00000225308 SRCAPQ6ZRS2 3230 aa28.62■■■□□ 2.17
SLC25A39-201ENST00000225308 PTCD1O75127 700 aaKnown RBP28.61■■■□□ 2.17
SLC25A39-201ENST00000225308 COL5A3P25940 1745 aaPredicted RBP28.61■■■□□ 2.17
SLC25A39-201ENST00000225308 KDM3BQ7LBC6 1761 aa28.61■■■□□ 2.17
SLC25A39-201ENST00000225308 TJP1Q07157 1748 aa28.61■■■□□ 2.17
SLC25A39-201ENST00000225308 RBM42Q9BTD8 480 aaKnown RBP28.61■■■□□ 2.17
SLC25A39-201ENST00000225308 BTBD11A6QL63 1104 aa28.6■■■□□ 2.17
SLC25A39-201ENST00000225308 ZNF790Q6PG37 636 aa28.6■■■□□ 2.17
SLC25A39-201ENST00000225308 TUBGCP6Q96RT7 1819 aa28.6■■■□□ 2.17
SLC25A39-201ENST00000225308 C4BP0C0L5 1744 aa28.6■■■□□ 2.17
SLC25A39-201ENST00000225308 ITPK1Q13572 414 aa28.59■■■□□ 2.17
SLC25A39-201ENST00000225308 TAF7Q15545 349 aaPredicted RBP28.59■■■□□ 2.17
SLC25A39-201ENST00000225308 ATP6V1AP38606 617 aa28.58■■■□□ 2.17
SLC25A39-201ENST00000225308 NBPF14Q5TI25 921 aa28.58■■■□□ 2.17
SLC25A39-201ENST00000225308 SENP3-EIF4A1A0A087X0R7 540 aa28.57■■■□□ 2.16
SLC25A39-201ENST00000225308 ZNF827Q17R98 1081 aa28.57■■■□□ 2.16
SLC25A39-201ENST00000225308 TTC5Q8N0Z6 440 aa28.57■■■□□ 2.16
SLC25A39-201ENST00000225308 MYH14Q7Z406 1995 aaKnown RBP28.56■■■□□ 2.16
SLC25A39-201ENST00000225308 KCNQ3O43525 872 aa28.55■■■□□ 2.16
SLC25A39-201ENST00000225308 R3HDM1Q15032 1099 aaKnown RBP28.55■■■□□ 2.16
SLC25A39-201ENST00000225308 SLC15A2Q16348 729 aa28.55■■■□□ 2.16
SLC25A39-201ENST00000225308 AKT1S1Q96B36 256 aa28.55■■■□□ 2.16
SLC25A39-201ENST00000225308 ZNF496Q96IT1 587 aaPredicted RBP28.55■■■□□ 2.16
SLC25A39-201ENST00000225308 QSER1Q2KHR3 1735 aa28.54■■■□□ 2.16
SLC25A39-201ENST00000225308 LINC00116Q8NCU8 138 aa28.54■■■□□ 2.16
SLC25A39-201ENST00000225308 MIS18AQ9NYP9 233 aa28.54■■■□□ 2.16
SLC25A39-201ENST00000225308 PSDA5PKW4 1024 aaPredicted RBP28.54■■■□□ 2.16
SLC25A39-201ENST00000225308 STK32BQ9NY57 414 aa28.54■■■□□ 2.16
SLC25A39-201ENST00000225308 UBR3Q6ZT12 1888 aa28.53■■■□□ 2.16
SLC25A39-201ENST00000225308 HEG1Q9ULI3 1381 aa28.51■■■□□ 2.15
SLC25A39-201ENST00000225308 CCDC27Q2M243 656 aa28.5■■■□□ 2.15
SLC25A39-201ENST00000225308 VSIG10Q8N0Z9 540 aa28.5■■■□□ 2.15
SLC25A39-201ENST00000225308 FMNL2Q96PY5 1086 aa28.5■■■□□ 2.15
SLC25A39-201ENST00000225308 CASZ1Q86V15 1759 aa28.49■■■□□ 2.15
SLC25A39-201ENST00000225308 HMGB2P26583 209 aaKnown RBP28.49■■■□□ 2.15
SLC25A39-201ENST00000225308 NCBP3Q53F19 620 aaKnown RBP28.49■■■□□ 2.15
SLC25A39-201ENST00000225308 DNAJC10Q8IXB1 793 aa28.48■■■□□ 2.15
SLC25A39-201ENST00000225308 WWC1Q8IX03 1113 aa28.47■■■□□ 2.15
SLC25A39-201ENST00000225308 BABAM1Q9NWV8 329 aa28.46■■■□□ 2.15
SLC25A39-201ENST00000225308 TFCP2L1Q9NZI6 479 aa28.46■■■□□ 2.15
SLC25A39-201ENST00000225308 TSPYL4Q9UJ04 414 aa28.46■■■□□ 2.15
SLC25A39-201ENST00000225308 AMIGO3Q86WK7 504 aa28.45■■■□□ 2.14
SLC25A39-201ENST00000225308 PDGFDQ9GZP0 370 aaPredicted RBP28.45■■■□□ 2.14
SLC25A39-201ENST00000225308 CNTNAP4Q9C0A0 1308 aa28.45■■■□□ 2.14
SLC25A39-201ENST00000225308 CHL1O00533 1208 aa28.44■■■□□ 2.14
SLC25A39-201ENST00000225308 AK7Q96M32 723 aa28.44■■■□□ 2.14
SLC25A39-201ENST00000225308 PNPLA7Q6ZV29 1317 aa28.44■■■□□ 2.14
SLC25A39-201ENST00000225308 CFAP44Q96MT7 982 aa28.43■■■□□ 2.14
SLC25A39-201ENST00000225308 SALL2Q9Y467 1007 aaPredicted RBP28.43■■■□□ 2.14
SLC25A39-201ENST00000225308 LAMB4A4D0S4 1761 aa28.43■■■□□ 2.14
SLC25A39-201ENST00000225308 CYP19A1P11511 503 aaPredicted RBP28.43■■■□□ 2.14
SLC25A39-201ENST00000225308 CRKLP46109 303 aaKnown RBP28.43■■■□□ 2.14
SLC25A39-201ENST00000225308 EIF4A1P60842 406 aaKnown RBP28.43■■■□□ 2.14
SLC25A39-201ENST00000225308 ZNF853P0CG23 659 aa28.42■■■□□ 2.14
SLC25A39-201ENST00000225308 CALD1Q05682 793 aaKnown RBP28.42■■■□□ 2.14
SLC25A39-201ENST00000225308 RC3H1Q5TC82 1133 aaKnown RBP28.42■■■□□ 2.14
SLC25A39-201ENST00000225308 LAS1LQ9Y4W2 734 aaKnown RBP28.42■■■□□ 2.14
SLC25A39-201ENST00000225308 PRAMEF22A3QJZ6 481 aa28.41■■■□□ 2.14
SLC25A39-201ENST00000225308 GNPATO15228 680 aa28.41■■■□□ 2.14
SLC25A39-201ENST00000225308 NGEFQ8N5V2 710 aa28.4■■■□□ 2.14
SLC25A39-201ENST00000225308 SNRPA1P09661 255 aaKnown RBP28.4■■■□□ 2.14
SLC25A39-201ENST00000225308 IFT57Q9NWB7 429 aa28.4■■■□□ 2.14
SLC25A39-201ENST00000225308 INTS5Q6P9B9 1019 aaKnown RBP28.39■■■□□ 2.13
SLC25A39-201ENST00000225308 SMIM5Q71RC9 77 aa28.39■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms