RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 SIGLEC1Q9BZZ2 1709 aa18.17■□□□□ 0.5
UBE2D4-201ENST00000222402 RAB3GAP1Q15042 981 aa18.16■□□□□ 0.5
UBE2D4-201ENST00000222402 CLASRPQ8N2M8 674 aaKnown RBP18.16■□□□□ 0.5
UBE2D4-201ENST00000222402 BAG4O95429 457 aaKnown RBP18.16■□□□□ 0.5
UBE2D4-201ENST00000222402 CPSF1Q10570 1443 aaKnown RBP18.16■□□□□ 0.5
UBE2D4-201ENST00000222402 CD2BP2O95400 341 aaKnown RBP18.16■□□□□ 0.5
UBE2D4-201ENST00000222402 SBNO1A3KN83 1393 aa18.16■□□□□ 0.5
UBE2D4-201ENST00000222402 HOXC9P31274 260 aa18.15■□□□□ 0.5
UBE2D4-201ENST00000222402 CNTROBQ8N137 903 aa18.15■□□□□ 0.5
UBE2D4-201ENST00000222402 SYAP1Q96A49 352 aaPredicted RBP18.15■□□□□ 0.5
UBE2D4-201ENST00000222402 NLRP2Q9NX02 1062 aa18.15■□□□□ 0.5
UBE2D4-201ENST00000222402 RTL1A6NKG5 1358 aa18.15■□□□□ 0.5
UBE2D4-201ENST00000222402 KIAA0232Q92628 1395 aa18.15■□□□□ 0.5
UBE2D4-201ENST00000222402 MCM2P49736 904 aa18.15■□□□□ 0.5
UBE2D4-201ENST00000222402 ISY1Q9ULR0 285 aaKnown RBP18.15■□□□□ 0.5
UBE2D4-201ENST00000222402 CHMP3Q9Y3E7 222 aa18.15■□□□□ 0.5
UBE2D4-201ENST00000222402 RUFY2Q8WXA3 655 aa18.14■□□□□ 0.49
UBE2D4-201ENST00000222402 DDX58O95786 925 aaKnown RBP18.14■□□□□ 0.49
UBE2D4-201ENST00000222402 CCDC9Q9Y3X0 531 aaKnown RBP18.14■□□□□ 0.49
UBE2D4-201ENST00000222402 G3BP1Q13283 466 aaKnown RBP eCLIP18.14■□□□□ 0.49
UBE2D4-201ENST00000222402 RAPGEF4Q8WZA2 1011 aa18.14■□□□□ 0.49
UBE2D4-201ENST00000222402 NEXNQ0ZGT2 675 aa18.13■□□□□ 0.49
UBE2D4-201ENST00000222402 PPP1R42Q7Z4L9 355 aa18.13■□□□□ 0.49
UBE2D4-201ENST00000222402 PI4KAP2A4QPH2 592 aa18.13■□□□□ 0.49
UBE2D4-201ENST00000222402 RIC3Q7Z5B4 369 aa18.13■□□□□ 0.49
UBE2D4-201ENST00000222402 PI4KAP1Q8N8J0 262 aa18.13■□□□□ 0.49
UBE2D4-201ENST00000222402 USP6P35125 1406 aa18.13■□□□□ 0.49
UBE2D4-201ENST00000222402 ATP8B2P98198 1209 aa18.12■□□□□ 0.49
UBE2D4-201ENST00000222402 PHAXQ9H814 394 aaKnown RBP18.12■□□□□ 0.49
UBE2D4-201ENST00000222402 ADGRB2O60241 1585 aa18.12■□□□□ 0.49
UBE2D4-201ENST00000222402 DNAAF4Q8WXU2 420 aa18.12■□□□□ 0.49
UBE2D4-201ENST00000222402 NAP1L2Q9ULW6 460 aaPredicted RBP18.12■□□□□ 0.49
UBE2D4-201ENST00000222402 CLTCQ00610 1675 aaKnown RBP18.12■□□□□ 0.49
UBE2D4-201ENST00000222402 NLRP1Q9C000 1473 aa18.12■□□□□ 0.49
UBE2D4-201ENST00000222402 HTATSF1O43719 755 aaKnown RBP18.12■□□□□ 0.49
UBE2D4-201ENST00000222402 KIF24Q5T7B8 1368 aa18.11■□□□□ 0.49
UBE2D4-201ENST00000222402 CWC27Q6UX04 472 aaKnown RBP18.11■□□□□ 0.49
UBE2D4-201ENST00000222402 ZNF330Q9Y3S2 320 aaPredicted RBP18.11■□□□□ 0.49
UBE2D4-201ENST00000222402 DNTTIP2Q5QJE6 756 aaKnown RBP18.11■□□□□ 0.49
UBE2D4-201ENST00000222402 ZGPATQ8N5A5 531 aaKnown RBP18.11■□□□□ 0.49
UBE2D4-201ENST00000222402 KIF1BPQ96EK5 621 aa18.11■□□□□ 0.49
UBE2D4-201ENST00000222402 CPS1P31327 1500 aa18.11■□□□□ 0.49
UBE2D4-201ENST00000222402 PNMA6EA0A0J9YXQ4 647 aa18.11■□□□□ 0.49
UBE2D4-201ENST00000222402 RNF214Q8ND24 703 aa18.11■□□□□ 0.49
UBE2D4-201ENST00000222402 MYO5BQ9ULV0 1848 aa18.1■□□□□ 0.49
UBE2D4-201ENST00000222402 A0A0G2JS52 829 aa18.1■□□□□ 0.49
UBE2D4-201ENST00000222402 ZC3H6P61129 1189 aaKnown RBP18.1■□□□□ 0.49
UBE2D4-201ENST00000222402 KCNH5Q8NCM2 988 aa18.1■□□□□ 0.49
UBE2D4-201ENST00000222402 CHPF2Q9P2E5 772 aa18.1■□□□□ 0.49
UBE2D4-201ENST00000222402 GOLGA6L4A6NEF3 574 aa18.1■□□□□ 0.49
UBE2D4-201ENST00000222402 ARHGEF10O15013 1369 aa18.1■□□□□ 0.49
UBE2D4-201ENST00000222402 LRRC59Q96AG4 307 aaKnown RBP18.1■□□□□ 0.49
UBE2D4-201ENST00000222402 ZKSCAN1P17029 563 aaPredicted RBP18.09■□□□□ 0.49
UBE2D4-201ENST00000222402 ESYT1Q9BSJ8 1104 aa18.09■□□□□ 0.49
UBE2D4-201ENST00000222402 MAP3K5Q99683 1374 aa18.09■□□□□ 0.49
UBE2D4-201ENST00000222402 PROSER2Q86WR7 435 aaPredicted RBP18.09■□□□□ 0.49
UBE2D4-201ENST00000222402 TTC5Q8N0Z6 440 aa18.09■□□□□ 0.49
UBE2D4-201ENST00000222402 SMC3Q9UQE7 1217 aa18.09■□□□□ 0.49
UBE2D4-201ENST00000222402 SIL1Q9H173 461 aa18.09■□□□□ 0.49
UBE2D4-201ENST00000222402 PLEKHG1Q9ULL1 1385 aa18.08■□□□□ 0.49
UBE2D4-201ENST00000222402 DLC1Q96QB1 1528 aa18.08■□□□□ 0.49
UBE2D4-201ENST00000222402 IL17REQ8NFR9 667 aa18.08■□□□□ 0.49
UBE2D4-201ENST00000222402 RAB11FIP3O75154 756 aa18.07■□□□□ 0.48
UBE2D4-201ENST00000222402 TMX3Q96JJ7 454 aa18.07■□□□□ 0.48
UBE2D4-201ENST00000222402 ESPNB1AK53 854 aa18.07■□□□□ 0.48
UBE2D4-201ENST00000222402 MYL6BP14649 208 aa18.07■□□□□ 0.48
UBE2D4-201ENST00000222402 RHPN1Q8TCX5 695 aa18.07■□□□□ 0.48
UBE2D4-201ENST00000222402 RICTORQ6R327 1708 aa18.07■□□□□ 0.48
UBE2D4-201ENST00000222402 KLHL40Q2TBA0 621 aa18.06■□□□□ 0.48
UBE2D4-201ENST00000222402 MAP2P11137 1827 aaKnown RBP18.06■□□□□ 0.48
UBE2D4-201ENST00000222402 LARP6Q9BRS8 491 aaKnown RBP18.06■□□□□ 0.48
UBE2D4-201ENST00000222402 VPS37CA5D8V6 355 aaPredicted RBP18.06■□□□□ 0.48
UBE2D4-201ENST00000222402 PHF14O94880 888 aa18.05■□□□□ 0.48
UBE2D4-201ENST00000222402 AACSQ86V21 672 aa18.05■□□□□ 0.48
UBE2D4-201ENST00000222402 LGR6Q9HBX8 967 aa18.05■□□□□ 0.48
UBE2D4-201ENST00000222402 DBF4Q9UBU7 674 aaPredicted RBP18.05■□□□□ 0.48
UBE2D4-201ENST00000222402 MBD3O95983 291 aa18.05■□□□□ 0.48
UBE2D4-201ENST00000222402 TAOK2Q9UL54 1235 aa18.05■□□□□ 0.48
UBE2D4-201ENST00000222402 IGSF1Q8N6C5 1336 aa18.04■□□□□ 0.48
UBE2D4-201ENST00000222402 SPG7Q9UQ90 795 aa18.04■□□□□ 0.48
UBE2D4-201ENST00000222402 CCDC173Q0VFZ6 552 aa18.04■□□□□ 0.48
UBE2D4-201ENST00000222402 CHMLP26374 656 aa18.04■□□□□ 0.48
UBE2D4-201ENST00000222402 FSD1Q9BTV5 496 aa18.04■□□□□ 0.48
UBE2D4-201ENST00000222402 ATP6V1DQ9Y5K8 247 aa18.04■□□□□ 0.48
UBE2D4-201ENST00000222402 MAP3K2Q9Y2U5 619 aa18.03■□□□□ 0.48
UBE2D4-201ENST00000222402 AMOTQ4VCS5 1084 aa18.03■□□□□ 0.48
UBE2D4-201ENST00000222402 DDX54Q8TDD1 881 aaKnown RBP18.03■□□□□ 0.48
UBE2D4-201ENST00000222402 RBM27Q9P2N5 1060 aaKnown RBP18.03■□□□□ 0.48
UBE2D4-201ENST00000222402 GLRX3O76003 335 aaKnown RBP18.03■□□□□ 0.48
UBE2D4-201ENST00000222402 ERC1Q8IUD2 1116 aa18.03■□□□□ 0.48
UBE2D4-201ENST00000222402 KIF2CQ99661 725 aa18.03■□□□□ 0.48
UBE2D4-201ENST00000222402 SYCE3A1L190 88 aa18.02■□□□□ 0.48
UBE2D4-201ENST00000222402 IP6K1Q92551 441 aa18.02■□□□□ 0.48
UBE2D4-201ENST00000222402 SOS1Q07889 1333 aaPredicted RBP18.02■□□□□ 0.48
UBE2D4-201ENST00000222402 HSP90B1P14625 803 aaKnown RBP18.02■□□□□ 0.48
UBE2D4-201ENST00000222402 NBPF6Q5VWK0 638 aa18.02■□□□□ 0.48
UBE2D4-201ENST00000222402 NBPF4Q96M43 638 aa18.02■□□□□ 0.48
UBE2D4-201ENST00000222402 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.02■□□□□ 0.48
UBE2D4-201ENST00000222402 AGLP35573 1532 aa18.02■□□□□ 0.48
UBE2D4-201ENST00000222402 ATF3P18847 181 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms