RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 DHX8Q14562 1220 aaKnown RBP12.99□□□□□ -0.33
KNOP1-201ENST00000219837 TAF4BQ92750 862 aa12.99□□□□□ -0.33
KNOP1-201ENST00000219837 KRT32Q14532 448 aa12.98□□□□□ -0.33
KNOP1-201ENST00000219837 MPRIPQ6WCQ1 1025 aa12.98□□□□□ -0.33
KNOP1-201ENST00000219837 MCM10Q7L590 875 aa12.98□□□□□ -0.33
KNOP1-201ENST00000219837 TMEM87AQ8NBN3 555 aa12.98□□□□□ -0.33
KNOP1-201ENST00000219837 SMTNL1A8MU46 457 aa12.98□□□□□ -0.33
KNOP1-201ENST00000219837 SLC5A1P13866 664 aa12.98□□□□□ -0.33
KNOP1-201ENST00000219837 CAMK4Q16566 473 aa12.98□□□□□ -0.33
KNOP1-201ENST00000219837 RBM10P98175 930 aaKnown RBP12.98□□□□□ -0.33
KNOP1-201ENST00000219837 PPP1R12BO60237 982 aaPredicted RBP12.98□□□□□ -0.33
KNOP1-201ENST00000219837 WDHD1O75717 1129 aaPredicted RBP12.98□□□□□ -0.33
KNOP1-201ENST00000219837 CCDC150Q8NCX0 1101 aa12.98□□□□□ -0.33
KNOP1-201ENST00000219837 LRRFIP2Q9Y608 721 aaKnown RBP12.98□□□□□ -0.33
KNOP1-201ENST00000219837 SMARCA5O60264 1052 aaPredicted RBP12.98□□□□□ -0.33
KNOP1-201ENST00000219837 KIAA0754O94854 1291 aa12.98□□□□□ -0.33
KNOP1-201ENST00000219837 ATAD2Q6PL18 1390 aa12.97□□□□□ -0.33
KNOP1-201ENST00000219837 EHMT1Q9H9B1 1298 aa12.97□□□□□ -0.33
KNOP1-201ENST00000219837 CCDC112Q8NEF3 446 aa12.97□□□□□ -0.33
KNOP1-201ENST00000219837 NUP62CLQ9H1M0 184 aa12.97□□□□□ -0.33
KNOP1-201ENST00000219837 ANAPC15P60006 121 aa12.97□□□□□ -0.33
KNOP1-201ENST00000219837 UPF3BQ9BZI7 483 aaKnown RBP12.97□□□□□ -0.33
KNOP1-201ENST00000219837 EZRP15311 586 aaKnown RBP12.97□□□□□ -0.33
KNOP1-201ENST00000219837 HMGB2P26583 209 aaKnown RBP12.97□□□□□ -0.33
KNOP1-201ENST00000219837 ZNF444Q8N0Y2 327 aaPredicted RBP12.97□□□□□ -0.33
KNOP1-201ENST00000219837 IFIT1P09914 478 aaKnown RBP12.97□□□□□ -0.33
KNOP1-201ENST00000219837 SLC4A8Q2Y0W8 1093 aa12.97□□□□□ -0.33
KNOP1-201ENST00000219837 DAPK1P53355 1430 aa12.97□□□□□ -0.33
KNOP1-201ENST00000219837 NFE2L2Q16236 605 aa12.96□□□□□ -0.33
KNOP1-201ENST00000219837 EPB41L2O43491 1005 aaKnown RBP12.96□□□□□ -0.33
KNOP1-201ENST00000219837 CCDC148Q8NFR7 591 aa12.96□□□□□ -0.33
KNOP1-201ENST00000219837 DUSP27Q5VZP5 1158 aa12.96□□□□□ -0.34
KNOP1-201ENST00000219837 CC2D2AQ9P2K1 1620 aa12.96□□□□□ -0.34
KNOP1-201ENST00000219837 SLC52A1Q9NWF4 448 aa12.96□□□□□ -0.34
KNOP1-201ENST00000219837 RPGRIP1LQ68CZ1 1315 aa12.96□□□□□ -0.34
KNOP1-201ENST00000219837 KIF14Q15058 1648 aa12.96□□□□□ -0.34
KNOP1-201ENST00000219837 RANBP6O60518 1105 aaKnown RBP12.95□□□□□ -0.34
KNOP1-201ENST00000219837 PPP6R1Q9UPN7 881 aa12.95□□□□□ -0.34
KNOP1-201ENST00000219837 NESP48681 1621 aa12.95□□□□□ -0.34
KNOP1-201ENST00000219837 SSRP1Q08945 709 aaKnown RBP12.95□□□□□ -0.34
KNOP1-201ENST00000219837 HSP90AB3PQ58FF7 597 aa12.95□□□□□ -0.34
KNOP1-201ENST00000219837 ERLIN1O75477 346 aa12.95□□□□□ -0.34
KNOP1-201ENST00000219837 FERMT2Q96AC1 680 aa12.95□□□□□ -0.34
KNOP1-201ENST00000219837 RAB11FIP3O75154 756 aa12.95□□□□□ -0.34
KNOP1-201ENST00000219837 WAPLQ7Z5K2 1190 aa12.94□□□□□ -0.34
KNOP1-201ENST00000219837 CCDC83Q8IWF9 413 aa12.94□□□□□ -0.34
KNOP1-201ENST00000219837 NAPBQ9H115 298 aa12.94□□□□□ -0.34
KNOP1-201ENST00000219837 TRMT112Q9UI30 125 aaKnown RBP12.94□□□□□ -0.34
KNOP1-201ENST00000219837 TAF3Q5VWG9 929 aa12.94□□□□□ -0.34
KNOP1-201ENST00000219837 DRC1Q96MC2 740 aa12.94□□□□□ -0.34
KNOP1-201ENST00000219837 CCDC178Q5BJE1 867 aa12.94□□□□□ -0.34
KNOP1-201ENST00000219837 PRPF40BQ6NWY9 871 aaKnown RBP12.94□□□□□ -0.34
KNOP1-201ENST00000219837 BOLA2Q9H3K6 86 aa12.94□□□□□ -0.34
KNOP1-201ENST00000219837 CA8P35219 290 aa12.94□□□□□ -0.34
KNOP1-201ENST00000219837 GOPCQ9HD26 462 aa12.94□□□□□ -0.34
KNOP1-201ENST00000219837 GOLGA6L7A0A1B0GV03 622 aa12.94□□□□□ -0.34
KNOP1-201ENST00000219837 EIF3JO75822 258 aaKnown RBP12.94□□□□□ -0.34
KNOP1-201ENST00000219837 TMEM57Q8N5G2 664 aa12.94□□□□□ -0.34
KNOP1-201ENST00000219837 FCHSD2O94868 740 aa12.93□□□□□ -0.34
KNOP1-201ENST00000219837 CASQ1P31415 396 aa12.93□□□□□ -0.34
KNOP1-201ENST00000219837 IFIT5Q13325 482 aaKnown RBP12.93□□□□□ -0.34
KNOP1-201ENST00000219837 CCDC91Q7Z6B0 441 aa12.93□□□□□ -0.34
KNOP1-201ENST00000219837 SLF2Q8IX21 1173 aa12.93□□□□□ -0.34
KNOP1-201ENST00000219837 U3KPZ7 1027 aaPredicted RBP12.93□□□□□ -0.34
KNOP1-201ENST00000219837 ANKRD18BA2A2Z9 1011 aa12.93□□□□□ -0.34
KNOP1-201ENST00000219837 FKBP15Q5T1M5 1219 aa12.93□□□□□ -0.34
KNOP1-201ENST00000219837 SLC12A7Q9Y666 1083 aa12.93□□□□□ -0.34
KNOP1-201ENST00000219837 SYNJ1O43426 1573 aa12.93□□□□□ -0.34
KNOP1-201ENST00000219837 MAP3K12Q12852 859 aa12.93□□□□□ -0.34
KNOP1-201ENST00000219837 SPA17Q15506 151 aa12.93□□□□□ -0.34
KNOP1-201ENST00000219837 LARP1Q6PKG0 1096 aaKnown RBP12.93□□□□□ -0.34
KNOP1-201ENST00000219837 TMEM266Q2M3C6 531 aa12.92□□□□□ -0.34
KNOP1-201ENST00000219837 EXOC6BQ9Y2D4 811 aa12.92□□□□□ -0.34
KNOP1-201ENST00000219837 MTERF4Q7Z6M4 381 aaKnown RBP12.92□□□□□ -0.34
KNOP1-201ENST00000219837 CCDC66A2RUB6 948 aa12.92□□□□□ -0.34
KNOP1-201ENST00000219837 GUCY1B3Q02153 619 aa12.92□□□□□ -0.34
KNOP1-201ENST00000219837 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.92□□□□□ -0.34
KNOP1-201ENST00000219837 CDK13Q14004 1512 aaKnown RBP12.92□□□□□ -0.34
KNOP1-201ENST00000219837 NLRP5P59047 1200 aa12.92□□□□□ -0.34
KNOP1-201ENST00000219837 KIF1BPQ96EK5 621 aa12.92□□□□□ -0.34
KNOP1-201ENST00000219837 CTNNBL1Q8WYA6 563 aaPredicted RBP12.92□□□□□ -0.34
KNOP1-201ENST00000219837 ARAP1Q96P48 1450 aa12.92□□□□□ -0.34
KNOP1-201ENST00000219837 TMPOP42166 694 aaKnown RBP12.91□□□□□ -0.34
KNOP1-201ENST00000219837 CFAP100Q494V2 611 aa12.91□□□□□ -0.34
KNOP1-201ENST00000219837 KLHL10Q6JEL2 608 aa12.91□□□□□ -0.34
KNOP1-201ENST00000219837 ZNF622Q969S3 477 aaKnown RBP eCLIP12.91□□□□□ -0.346e-7■■■□□ 17.7
KNOP1-201ENST00000219837 CCDC102AQ96A19 550 aa12.91□□□□□ -0.34
KNOP1-201ENST00000219837 TMX1Q9H3N1 280 aa12.91□□□□□ -0.34
KNOP1-201ENST00000219837 CETN2P41208 172 aa12.91□□□□□ -0.34
KNOP1-201ENST00000219837 CACNA2D4Q7Z3S7 1137 aa12.91□□□□□ -0.34
KNOP1-201ENST00000219837 NGLY1Q96IV0 654 aa12.91□□□□□ -0.34
KNOP1-201ENST00000219837 CCDC113Q9H0I3 377 aa12.91□□□□□ -0.34
KNOP1-201ENST00000219837 BAG4O95429 457 aaKnown RBP12.91□□□□□ -0.34
KNOP1-201ENST00000219837 MX1P20591 662 aa12.91□□□□□ -0.34
KNOP1-201ENST00000219837 ZNF213O14771 459 aa12.9□□□□□ -0.34
KNOP1-201ENST00000219837 ST5P78524 1137 aa12.9□□□□□ -0.34
KNOP1-201ENST00000219837 TNNT1P13805 278 aa12.9□□□□□ -0.34
KNOP1-201ENST00000219837 GPTP24298 496 aa12.9□□□□□ -0.34
KNOP1-201ENST00000219837 CCDC144CPQ8IYA2 1237 aa12.9□□□□□ -0.34
KNOP1-201ENST00000219837 CCDC82Q8N4S0 544 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms