RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 FAM160A1Q05DH4 1040 aa12.85□□□□□ -0.35
USP31-201ENST00000219689 MIPOL1Q8TD10 442 aa12.85□□□□□ -0.35
USP31-201ENST00000219689 JAKMIP1Q96N16 626 aaKnown RBP12.85□□□□□ -0.35
USP31-201ENST00000219689 PHACTR2O75167 634 aa12.85□□□□□ -0.35
USP31-201ENST00000219689 MATR3P43243 847 aaKnown RBP eCLIP12.85□□□□□ -0.356e-7■■■■□ 22.4
USP31-201ENST00000219689 C20orf194Q5TEA3 1177 aa12.85□□□□□ -0.35
USP31-201ENST00000219689 GOLGA1Q92805 767 aa12.85□□□□□ -0.35
USP31-201ENST00000219689 NAP1L3Q99457 506 aaPredicted RBP12.85□□□□□ -0.35
USP31-201ENST00000219689 CCDC144AA2RUR9 1427 aa12.85□□□□□ -0.35
USP31-201ENST00000219689 GABPB1Q06547 395 aaPredicted RBP12.85□□□□□ -0.35
USP31-201ENST00000219689 SLU7O95391 586 aaKnown RBP12.84□□□□□ -0.35
USP31-201ENST00000219689 WASHC4Q2M389 1173 aa12.84□□□□□ -0.35
USP31-201ENST00000219689 KLHL10Q6JEL2 608 aa12.84□□□□□ -0.35
USP31-201ENST00000219689 KLHL40Q2TBA0 621 aa12.84□□□□□ -0.35
USP31-201ENST00000219689 SPECC1Q5M775 1068 aa12.84□□□□□ -0.35
USP31-201ENST00000219689 NUP88Q99567 741 aaPredicted RBP12.84□□□□□ -0.35
USP31-201ENST00000219689 MYRIPQ8NFW9 859 aa12.84□□□□□ -0.35
USP31-201ENST00000219689 VPS37DQ86XT2 251 aa12.83□□□□□ -0.35
USP31-201ENST00000219689 DNAI1Q9UI46 699 aa12.83□□□□□ -0.35
USP31-201ENST00000219689 FERMT3Q86UX7 667 aa12.83□□□□□ -0.36
USP31-201ENST00000219689 RIOK3O14730 519 aaKnown RBP12.83□□□□□ -0.36
USP31-201ENST00000219689 MVPQ14764 893 aaKnown RBP12.83□□□□□ -0.36
USP31-201ENST00000219689 MTMR7Q9Y216 660 aa12.83□□□□□ -0.36
USP31-201ENST00000219689 AMPHP49418 695 aa12.83□□□□□ -0.36
USP31-201ENST00000219689 CCDC150Q8NCX0 1101 aa12.83□□□□□ -0.36
USP31-201ENST00000219689 HS1BP3Q53T59 392 aa12.83□□□□□ -0.36
USP31-201ENST00000219689 CCDC83Q8IWF9 413 aa12.83□□□□□ -0.36
USP31-201ENST00000219689 CPLX3Q8WVH0 158 aa12.83□□□□□ -0.36
USP31-201ENST00000219689 TCHHQ07283 1943 aa12.83□□□□□ -0.36
USP31-201ENST00000219689 UBTFL1P0CB47 393 aaPredicted RBP12.82□□□□□ -0.36
USP31-201ENST00000219689 GCKP35557 465 aa12.82□□□□□ -0.36
USP31-201ENST00000219689 TRAK1Q9UPV9 953 aa12.82□□□□□ -0.36
USP31-201ENST00000219689 FRMD3A2A2Y4 597 aa12.82□□□□□ -0.36
USP31-201ENST00000219689 NUTM2DQ5VT03 806 aaPredicted RBP12.82□□□□□ -0.36
USP31-201ENST00000219689 SEPT14Q6ZU15 432 aa12.82□□□□□ -0.36
USP31-201ENST00000219689 RAPGEF2Q9Y4G8 1499 aa12.82□□□□□ -0.36
USP31-201ENST00000219689 SKILP12757 684 aa12.82□□□□□ -0.36
USP31-201ENST00000219689 CFAP57Q96MR6 1250 aa12.82□□□□□ -0.36
USP31-201ENST00000219689 HMOX1P09601 288 aa12.81□□□□□ -0.36
USP31-201ENST00000219689 FMNL3Q8IVF7 1028 aa12.81□□□□□ -0.36
USP31-201ENST00000219689 MYH6P13533 1939 aa12.81□□□□□ -0.36
USP31-201ENST00000219689 C17orf53Q8N3J3 647 aaPredicted RBP12.81□□□□□ -0.36
USP31-201ENST00000219689 FBF1Q8TES7 1133 aa12.81□□□□□ -0.36
USP31-201ENST00000219689 TBC1D32Q96NH3 1257 aa12.81□□□□□ -0.36
USP31-201ENST00000219689 PAFAH1B1P43034 410 aa12.81□□□□□ -0.36
USP31-201ENST00000219689 ANO6Q4KMQ2 910 aa12.81□□□□□ -0.36
USP31-201ENST00000219689 KNL1Q8NG31 2342 aa12.81□□□□□ -0.36
USP31-201ENST00000219689 HIP1O00291 1037 aa12.81□□□□□ -0.36
USP31-201ENST00000219689 PTGS1P23219 599 aa12.8□□□□□ -0.36
USP31-201ENST00000219689 AP1ARQ63HQ0 302 aa12.8□□□□□ -0.36
USP31-201ENST00000219689 PLEKHH1Q9ULM0 1364 aa12.8□□□□□ -0.36
USP31-201ENST00000219689 BIN1O00499 593 aa12.8□□□□□ -0.36
USP31-201ENST00000219689 PDE1CQ14123 709 aaPredicted RBP12.8□□□□□ -0.36
USP31-201ENST00000219689 HDXQ7Z353 690 aa12.8□□□□□ -0.36
USP31-201ENST00000219689 TSR2Q969E8 191 aaKnown RBP12.8□□□□□ -0.36
USP31-201ENST00000219689 PUS7Q96PZ0 661 aaKnown RBP12.8□□□□□ -0.36
USP31-201ENST00000219689 GTF2E1P29083 439 aaPredicted RBP12.8□□□□□ -0.36
USP31-201ENST00000219689 SART3Q15020 963 aaKnown RBP12.8□□□□□ -0.36
USP31-201ENST00000219689 JADE2Q9NQC1 790 aa12.8□□□□□ -0.36
USP31-201ENST00000219689 INPP5BP32019 993 aa12.8□□□□□ -0.36
USP31-201ENST00000219689 CARMIL1Q5VZK9 1371 aa12.8□□□□□ -0.36
USP31-201ENST00000219689 GOLGA6L9A6NEM1 432 aa12.8□□□□□ -0.36
USP31-201ENST00000219689 HSP90AB4PQ58FF6 505 aa12.8□□□□□ -0.36
USP31-201ENST00000219689 C6orf163Q5TEZ5 329 aa12.8□□□□□ -0.36
USP31-201ENST00000219689 NSRP1Q9H0G5 558 aaKnown RBP12.8□□□□□ -0.36
USP31-201ENST00000219689 UACAQ9BZF9 1416 aa12.8□□□□□ -0.36
USP31-201ENST00000219689 ISM2Q6H9L7 571 aa12.8□□□□□ -0.36
USP31-201ENST00000219689 CWC27Q6UX04 472 aaKnown RBP12.8□□□□□ -0.36
USP31-201ENST00000219689 CUX2O14529 1486 aa12.79□□□□□ -0.36
USP31-201ENST00000219689 UBE2HP62256 183 aa12.79□□□□□ -0.36
USP31-201ENST00000219689 B4GALNT4Q76KP1 1039 aa12.79□□□□□ -0.36
USP31-201ENST00000219689 PCK1P35558 622 aa12.79□□□□□ -0.36
USP31-201ENST00000219689 FAM76AQ8TAV0 307 aa12.79□□□□□ -0.36
USP31-201ENST00000219689 KIF3BO15066 747 aa12.79□□□□□ -0.36
USP31-201ENST00000219689 HOMEZQ8IX15 550 aa12.79□□□□□ -0.36
USP31-201ENST00000219689 PNISRQ8TF01 805 aaKnown RBP12.79□□□□□ -0.36
USP31-201ENST00000219689 NEUROD6Q96NK8 337 aa12.79□□□□□ -0.36
USP31-201ENST00000219689 SIL1Q9H173 461 aa12.79□□□□□ -0.36
USP31-201ENST00000219689 PPP6R1Q9UPN7 881 aa12.79□□□□□ -0.36
USP31-201ENST00000219689 RABEP2Q9H5N1 569 aa12.79□□□□□ -0.36
USP31-201ENST00000219689 CTAGE9A4FU28 777 aa12.79□□□□□ -0.36
USP31-201ENST00000219689 FAM114A1Q8IWE2 563 aa12.79□□□□□ -0.36
USP31-201ENST00000219689 STAMBPO95630 424 aa12.79□□□□□ -0.36
USP31-201ENST00000219689 GSTTP1A0A1W2PQM5 241 aa12.79□□□□□ -0.36
USP31-201ENST00000219689 SURF6O75683 361 aaKnown RBP12.79□□□□□ -0.36
USP31-201ENST00000219689 CCDC186Q7Z3E2 898 aa12.79□□□□□ -0.36
USP31-201ENST00000219689 AFAP1L1Q8TED9 768 aa12.79□□□□□ -0.36
USP31-201ENST00000219689 TSPYL4Q9UJ04 414 aa12.79□□□□□ -0.36
USP31-201ENST00000219689 MYO9BQ13459 2157 aa12.78□□□□□ -0.36
USP31-201ENST00000219689 OPA1O60313 960 aa12.78□□□□□ -0.36
USP31-201ENST00000219689 KRT18P05783 430 aaKnown RBP12.78□□□□□ -0.36
USP31-201ENST00000219689 ZNF165P49910 485 aa12.78□□□□□ -0.36
USP31-201ENST00000219689 ZHX3Q9H4I2 956 aa12.78□□□□□ -0.36
USP31-201ENST00000219689 CTAGE5O15320 804 aa12.78□□□□□ -0.36
USP31-201ENST00000219689 ATP6V1AP38606 617 aa12.78□□□□□ -0.36
USP31-201ENST00000219689 PEX19P40855 299 aa12.78□□□□□ -0.36
USP31-201ENST00000219689 DIAPH1O60610 1272 aaKnown RBP12.78□□□□□ -0.36
USP31-201ENST00000219689 ZFYP08048 801 aaPredicted RBP12.78□□□□□ -0.36
USP31-201ENST00000219689 RHOXF2BP0C7M4 288 aa12.78□□□□□ -0.36
USP31-201ENST00000219689 DZIP1Q86YF9 867 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms