RNA–Protein interactions for RNA: ENST00000216492.9

CHGA-201, Transcript of chromogranin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHGA, Length 2,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-201ENST00000216492 IFNL2Q8IZJ0 200 aa21.44■■□□□ 1.02
CHGA-201ENST00000216492 MEGF6O75095 1541 aa21.44■■□□□ 1.02
CHGA-201ENST00000216492 VIRMAQ69YN4 1812 aaKnown RBP21.44■■□□□ 1.02
CHGA-201ENST00000216492 PHKG2P15735 406 aa21.44■■□□□ 1.02
CHGA-201ENST00000216492 ARHGAP45Q92619 1136 aa21.44■■□□□ 1.02
CHGA-201ENST00000216492 PLEKHG2Q9H7P9 1386 aa21.43■■□□□ 1.02
CHGA-201ENST00000216492 BTBD11A6QL63 1104 aa21.43■■□□□ 1.02
CHGA-201ENST00000216492 RWDD1Q9H446 243 aaPredicted RBP21.43■■□□□ 1.02
CHGA-201ENST00000216492 ABCA3Q99758 1704 aa21.42■■□□□ 1.02
CHGA-201ENST00000216492 MVPQ14764 893 aaKnown RBP21.42■■□□□ 1.02
CHGA-201ENST00000216492 FAM208AQ9UK61 1670 aaKnown RBP21.42■■□□□ 1.02
CHGA-201ENST00000216492 CYP27B1O15528 508 aa21.4■■□□□ 1.02
CHGA-201ENST00000216492 IL2RBP14784 551 aa21.4■■□□□ 1.02
CHGA-201ENST00000216492 LRRC37A3O60309 1634 aa21.4■■□□□ 1.02
CHGA-201ENST00000216492 ZCRB1Q8TBF4 217 aaKnown RBP21.4■■□□□ 1.02
CHGA-201ENST00000216492 ADAMTS2O95450 1211 aa21.39■■□□□ 1.01
CHGA-201ENST00000216492 SLC4A2P04920 1241 aa21.39■■□□□ 1.01
CHGA-201ENST00000216492 PCDHB15Q9Y5E8 787 aa21.39■■□□□ 1.01
CHGA-201ENST00000216492 EIF4A1P60842 406 aaKnown RBP21.38■■□□□ 1.01
CHGA-201ENST00000216492 SOS1Q07889 1333 aaPredicted RBP21.38■■□□□ 1.01
CHGA-201ENST00000216492 HSP90AB1P08238 724 aaKnown RBP21.38■■□□□ 1.01
CHGA-201ENST00000216492 ITPRIPQ8IWB1 547 aa21.38■■□□□ 1.01
CHGA-201ENST00000216492 TMEM57Q8N5G2 664 aa21.38■■□□□ 1.01
CHGA-201ENST00000216492 DCAF5Q96JK2 942 aa21.38■■□□□ 1.01
CHGA-201ENST00000216492 OVOS2A0A0G2JMS6 1433 aa21.38■■□□□ 1.01
CHGA-201ENST00000216492 PHLPP1O60346 1717 aa21.37■■□□□ 1.01
CHGA-201ENST00000216492 KCNQ3O43525 872 aa21.37■■□□□ 1.01
CHGA-201ENST00000216492 CERKQ8TCT0 537 aa21.37■■□□□ 1.01
CHGA-201ENST00000216492 NUTM2BA6NNL0 878 aaPredicted RBP21.36■■□□□ 1.01
CHGA-201ENST00000216492 NUTM2EB1AL46 878 aaPredicted RBP21.36■■□□□ 1.01
CHGA-201ENST00000216492 CCDC30Q5VVM6 783 aa21.36■■□□□ 1.01
CHGA-201ENST00000216492 NUTM2AQ8IVF1 878 aaPredicted RBP21.36■■□□□ 1.01
CHGA-201ENST00000216492 API5Q9BZZ5 524 aaKnown RBP21.36■■□□□ 1.01
CHGA-201ENST00000216492 DDX19BQ9UMR2 479 aa21.36■■□□□ 1.01
CHGA-201ENST00000216492 COL22A1Q8NFW1 1626 aaPredicted RBP21.36■■□□□ 1.01
CHGA-201ENST00000216492 COL16A1Q07092 1604 aaPredicted RBP21.36■■□□□ 1.01
CHGA-201ENST00000216492 NFATC2IPQ8NCF5 419 aa21.35■■□□□ 1.01
CHGA-201ENST00000216492 SLC52A2Q9HAB3 445 aa21.35■■□□□ 1.01
CHGA-201ENST00000216492 STK31Q9BXU1 1019 aa21.35■■□□□ 1.01
CHGA-201ENST00000216492 PCDH11XQ9BZA7 1347 aa21.34■■□□□ 1.01
CHGA-201ENST00000216492 PCDH11YQ9BZA8 1340 aa21.34■■□□□ 1.01
CHGA-201ENST00000216492 NECTIN2Q92692 538 aa21.33■■□□□ 1.01
CHGA-201ENST00000216492 KDM6AO15550 1401 aaPredicted RBP21.33■■□□□ 1
CHGA-201ENST00000216492 DDX54Q8TDD1 881 aaKnown RBP21.32■■□□□ 1
CHGA-201ENST00000216492 PTPRCP08575 1304 aa21.32■■□□□ 1
CHGA-201ENST00000216492 HOXB7P09629 217 aa21.32■■□□□ 1
CHGA-201ENST00000216492 CHMP4AQ9BY43 222 aa21.32■■□□□ 1
CHGA-201ENST00000216492 PDZRN3Q9UPQ7 1066 aa21.32■■□□□ 1
CHGA-201ENST00000216492 HDGFL1Q5TGJ6 251 aa21.31■■□□□ 1
CHGA-201ENST00000216492 ABCC4O15439 1325 aa21.3■■□□□ 1
CHGA-201ENST00000216492 EIF2S2P20042 333 aaKnown RBP21.3■■□□□ 1
CHGA-201ENST00000216492 COL14A1Q05707 1796 aaKnown RBP21.3■■□□□ 1
CHGA-201ENST00000216492 CABP4P57796 275 aa21.3■■□□□ 1
CHGA-201ENST00000216492 ZNF790Q6PG37 636 aa21.3■■□□□ 1
CHGA-201ENST00000216492 G2E3Q7L622 706 aa21.29■■□□□ 1
CHGA-201ENST00000216492 UPF2Q9HAU5 1272 aaKnown RBP21.29■■□□□ 1
CHGA-201ENST00000216492 SLC4A3P48751 1232 aa21.28■■□□□ 1
CHGA-201ENST00000216492 SLC39A6Q13433 755 aa21.28■■□□□ 1
CHGA-201ENST00000216492 NKX1-1Q15270 411 aaPredicted RBP21.28■■□□□ 1
CHGA-201ENST00000216492 ZBTB40Q9NUA8 1239 aa21.28■■□□□ 1
CHGA-201ENST00000216492 ZBTB7BO15156 539 aaPredicted RBP21.28■■□□□ 1
CHGA-201ENST00000216492 GIGYF1O75420 1035 aaPredicted RBP21.28■■□□□ 1
CHGA-201ENST00000216492 HDAC1Q13547 482 aaPredicted RBP21.28■■□□□ 1
CHGA-201ENST00000216492 CHMP4BQ9H444 224 aaKnown RBP21.28■■□□□ 1
CHGA-201ENST00000216492 PKD1L3Q7Z443 1732 aa21.26■□□□□ 0.99
CHGA-201ENST00000216492 ADAMTS7Q9UKP4 1686 aa21.26■□□□□ 0.99
CHGA-201ENST00000216492 JCADQ9P266 1359 aa21.26■□□□□ 0.99
CHGA-201ENST00000216492 HEG1Q9ULI3 1381 aa21.26■□□□□ 0.99
CHGA-201ENST00000216492 ERVV-2B6SEH9 535 aa21.25■□□□□ 0.99
CHGA-201ENST00000216492 FLIIQ13045 1269 aa21.25■□□□□ 0.99
CHGA-201ENST00000216492 INTS3Q68E01 1043 aaKnown RBP21.25■□□□□ 0.99
CHGA-201ENST00000216492 BECN1Q14457 450 aa21.24■□□□□ 0.99
CHGA-201ENST00000216492 TTC5Q8N0Z6 440 aa21.24■□□□□ 0.99
CHGA-201ENST00000216492 PARP4Q9UKK3 1724 aaKnown RBP21.24■□□□□ 0.99
CHGA-201ENST00000216492 EXOC5O00471 708 aa21.24■□□□□ 0.99
CHGA-201ENST00000216492 FKBP5Q13451 457 aaPredicted RBP21.23■□□□□ 0.99
CHGA-201ENST00000216492 KDM3BQ7LBC6 1761 aa21.23■□□□□ 0.99
CHGA-201ENST00000216492 PRAMEF22A3QJZ6 481 aa21.22■□□□□ 0.99
CHGA-201ENST00000216492 CHPF2Q9P2E5 772 aa21.22■□□□□ 0.99
CHGA-201ENST00000216492 RGS12O14924 1447 aa21.22■□□□□ 0.99
CHGA-201ENST00000216492 F6X3S4 739 aa21.22■□□□□ 0.99
CHGA-201ENST00000216492 ZNF496Q96IT1 587 aaPredicted RBP21.22■□□□□ 0.99
CHGA-201ENST00000216492 PHAXQ9H814 394 aaKnown RBP21.22■□□□□ 0.99
CHGA-201ENST00000216492 THRAP3Q9Y2W1 955 aaKnown RBP21.22■□□□□ 0.99
CHGA-201ENST00000216492 SPATA31A1Q5TZJ5 1347 aa21.21■□□□□ 0.99
CHGA-201ENST00000216492 SCN11AQ9UI33 1791 aa21.21■□□□□ 0.99
CHGA-201ENST00000216492 SEC24BO95487 1268 aa21.21■□□□□ 0.99
CHGA-201ENST00000216492 NFKBIBQ15653 356 aa21.21■□□□□ 0.99
CHGA-201ENST00000216492 SLC4A10Q6U841 1118 aa21.21■□□□□ 0.99
CHGA-201ENST00000216492 DBF4Q9UBU7 674 aaPredicted RBP21.21■□□□□ 0.99
CHGA-201ENST00000216492 NGLY1Q96IV0 654 aa21.2■□□□□ 0.99
CHGA-201ENST00000216492 DISP2A7MBM2 1401 aa21.2■□□□□ 0.98
CHGA-201ENST00000216492 CDCA7Q9BWT1 371 aaPredicted RBP21.2■□□□□ 0.98
CHGA-201ENST00000216492 C8orf37Q96NL8 207 aa21.19■□□□□ 0.98
CHGA-201ENST00000216492 FMNL2Q96PY5 1086 aa21.19■□□□□ 0.98
CHGA-201ENST00000216492 CCDC9Q9Y3X0 531 aaKnown RBP21.19■□□□□ 0.98
CHGA-201ENST00000216492 MRC1P22897 1456 aa21.19■□□□□ 0.98
CHGA-201ENST00000216492 SIPA1L3O60292 1781 aaPredicted RBP21.18■□□□□ 0.98
CHGA-201ENST00000216492 SNRPA1P09661 255 aaKnown RBP21.18■□□□□ 0.98
CHGA-201ENST00000216492 CCT4P50991 539 aaKnown RBP21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms