RNA–Protein interactions for RNA: ENST00000159111.8

KDM4B-201, Transcript of lysine demethylase 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM4B, Length 5,593 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-201ENST00000159111 NUTM2BA6NNL0 878 aaPredicted RBP20.11■□□□□ 0.81
KDM4B-201ENST00000159111 NUTM2EB1AL46 878 aaPredicted RBP20.11■□□□□ 0.81
KDM4B-201ENST00000159111 NUTM2AQ8IVF1 878 aaPredicted RBP20.11■□□□□ 0.81
KDM4B-201ENST00000159111 ZNF652Q9Y2D9 606 aa20.11■□□□□ 0.81
KDM4B-201ENST00000159111 ATP10BO94823 1461 aa20.11■□□□□ 0.81
KDM4B-201ENST00000159111 TRIM27P14373 513 aa20.11■□□□□ 0.81
KDM4B-201ENST00000159111 SH2B1Q9NRF2 756 aaPredicted RBP20.11■□□□□ 0.81
KDM4B-201ENST00000159111 RAI14Q9P0K7 980 aa20.11■□□□□ 0.81
KDM4B-201ENST00000159111 TXLNBQ8N3L3 684 aa20.11■□□□□ 0.81
KDM4B-201ENST00000159111 AIDAQ96BJ3 306 aa20.11■□□□□ 0.81
KDM4B-201ENST00000159111 MYD88Q99836 296 aa20.11■□□□□ 0.81
KDM4B-201ENST00000159111 PPFIBP1Q86W92 1011 aa20.11■□□□□ 0.81
KDM4B-201ENST00000159111 SMARCA5O60264 1052 aaPredicted RBP20.1■□□□□ 0.81
KDM4B-201ENST00000159111 DBF4Q9UBU7 674 aaPredicted RBP20.1■□□□□ 0.81
KDM4B-201ENST00000159111 NUP153P49790 1475 aaKnown RBP20.1■□□□□ 0.81
KDM4B-201ENST00000159111 CEP57L1Q8IYX8 460 aa20.1■□□□□ 0.81
KDM4B-201ENST00000159111 METTL24Q5JXM2 366 aa20.1■□□□□ 0.81
KDM4B-201ENST00000159111 KLHL34Q8N239 644 aa20.1■□□□□ 0.81
KDM4B-201ENST00000159111 SPC24Q8NBT2 197 aa20.1■□□□□ 0.81
KDM4B-201ENST00000159111 LRP2BPQ9P2M1 347 aa20.1■□□□□ 0.81
KDM4B-201ENST00000159111 HSP90AB3PQ58FF7 597 aa20.09■□□□□ 0.81
KDM4B-201ENST00000159111 CEP131Q9UPN4 1083 aa20.09■□□□□ 0.81
KDM4B-201ENST00000159111 HMGB1P09429 215 aaKnown RBP20.09■□□□□ 0.81
KDM4B-201ENST00000159111 BRPF3Q9ULD4 1205 aa20.09■□□□□ 0.81
KDM4B-201ENST00000159111 SYCP2Q9BX26 1530 aa20.08■□□□□ 0.81
KDM4B-201ENST00000159111 PTPRKQ15262 1439 aa20.08■□□□□ 0.81
KDM4B-201ENST00000159111 PRAG1Q86YV5 1406 aa20.08■□□□□ 0.81
KDM4B-201ENST00000159111 SMTNL1A8MU46 457 aa20.08■□□□□ 0.8
KDM4B-201ENST00000159111 RDXP35241 583 aaKnown RBP20.08■□□□□ 0.8
KDM4B-201ENST00000159111 LUC7LQ9NQ29 371 aaKnown RBP20.08■□□□□ 0.8
KDM4B-201ENST00000159111 BRPF1P55201 1214 aaPredicted RBP20.07■□□□□ 0.8
KDM4B-201ENST00000159111 IDH1O75874 414 aaKnown RBP20.07■□□□□ 0.8
KDM4B-201ENST00000159111 KIAA0556O60303 1618 aa20.07■□□□□ 0.8
KDM4B-201ENST00000159111 PRPF40BQ6NWY9 871 aaKnown RBP20.07■□□□□ 0.8
KDM4B-201ENST00000159111 USHBP1Q8N6Y0 703 aa20.07■□□□□ 0.8
KDM4B-201ENST00000159111 LRRFIP2Q9Y608 721 aaKnown RBP20.07■□□□□ 0.8
KDM4B-201ENST00000159111 HSP90AB2PQ58FF8 381 aa20.06■□□□□ 0.8
KDM4B-201ENST00000159111 PIK3R4Q99570 1358 aa20.06■□□□□ 0.8
KDM4B-201ENST00000159111 FLIIQ13045 1269 aa20.06■□□□□ 0.8
KDM4B-201ENST00000159111 IL27Q8NEV9 243 aa20.06■□□□□ 0.8
KDM4B-201ENST00000159111 TTLL5Q6EMB2 1281 aa20.06■□□□□ 0.8
KDM4B-201ENST00000159111 STK11IPQ8N1F8 1099 aa20.06■□□□□ 0.8
KDM4B-201ENST00000159111 ATP2B2Q01814 1243 aa20.05■□□□□ 0.8
KDM4B-201ENST00000159111 MAP3K11Q16584 847 aa20.05■□□□□ 0.8
KDM4B-201ENST00000159111 TNRQ92752 1358 aa20.05■□□□□ 0.8
KDM4B-201ENST00000159111 ADAMTS12P58397 1594 aa20.05■□□□□ 0.8
KDM4B-201ENST00000159111 IFIT1P09914 478 aaKnown RBP20.05■□□□□ 0.8
KDM4B-201ENST00000159111 ARHGAP45Q92619 1136 aa20.05■□□□□ 0.8
KDM4B-201ENST00000159111 A2MP01023 1474 aa20.05■□□□□ 0.8
KDM4B-201ENST00000159111 SHANK2Q9UPX8 1470 aa20.05■□□□□ 0.8
KDM4B-201ENST00000159111 SYCP1Q15431 976 aa20.05■□□□□ 0.8
KDM4B-201ENST00000159111 TTC21AQ8NDW8 1320 aa20.04■□□□□ 0.8
KDM4B-201ENST00000159111 ZNF518AQ6AHZ1 1483 aa20.04■□□□□ 0.8
KDM4B-201ENST00000159111 BMP2KLQ5H9B9 411 aa20.04■□□□□ 0.8
KDM4B-201ENST00000159111 ZNF287Q9HBT7 754 aa20.04■□□□□ 0.8
KDM4B-201ENST00000159111 MBIPQ9NS73 344 aa20.04■□□□□ 0.8
KDM4B-201ENST00000159111 NOM1Q5C9Z4 860 aaKnown RBP20.04■□□□□ 0.8
KDM4B-201ENST00000159111 F6X3S4 739 aa20.04■□□□□ 0.8
KDM4B-201ENST00000159111 MPRIPQ6WCQ1 1025 aa20.03■□□□□ 0.8
KDM4B-201ENST00000159111 CCDC83Q8IWF9 413 aa20.03■□□□□ 0.8
KDM4B-201ENST00000159111 EVI5LQ96CN4 794 aa20.03■□□□□ 0.8
KDM4B-201ENST00000159111 UPF3BQ9BZI7 483 aaKnown RBP20.03■□□□□ 0.8
KDM4B-201ENST00000159111 WDR62O43379 1518 aa20.03■□□□□ 0.8
KDM4B-201ENST00000159111 TEX14Q8IWB6 1497 aa20.03■□□□□ 0.8
KDM4B-201ENST00000159111 BOLA2Q9H3K6 86 aa20.03■□□□□ 0.8
KDM4B-201ENST00000159111 CAVIN4Q5BKX8 364 aa20.02■□□□□ 0.8
KDM4B-201ENST00000159111 SCAND2PQ9GZW5 306 aaPredicted RBP20.02■□□□□ 0.8
KDM4B-201ENST00000159111 IFIT5Q13325 482 aaKnown RBP20.02■□□□□ 0.8
KDM4B-201ENST00000159111 ACEP12821 1306 aa20.02■□□□□ 0.8
KDM4B-201ENST00000159111 BMP2KQ9NSY1 1161 aaPredicted RBP20.01■□□□□ 0.79
KDM4B-201ENST00000159111 PUS7Q96PZ0 661 aaKnown RBP20.01■□□□□ 0.79
KDM4B-201ENST00000159111 TEX13AQ9BXU3 409 aaPredicted RBP20.01■□□□□ 0.79
KDM4B-201ENST00000159111 DNAJC5BQ9UF47 199 aa20.01■□□□□ 0.79
KDM4B-201ENST00000159111 CCDC196A0A1B0GTZ2 297 aa20■□□□□ 0.79
KDM4B-201ENST00000159111 SLC5A1P13866 664 aa20■□□□□ 0.79
KDM4B-201ENST00000159111 HDAC1Q13547 482 aaPredicted RBP20■□□□□ 0.79
KDM4B-201ENST00000159111 CCDC183Q5T5S1 534 aa20■□□□□ 0.79
KDM4B-201ENST00000159111 PARD3Q8TEW0 1356 aa20■□□□□ 0.79
KDM4B-201ENST00000159111 WDR7Q9Y4E6 1490 aa20■□□□□ 0.79
KDM4B-201ENST00000159111 ZFYVE27Q5T4F4 411 aa20■□□□□ 0.79
KDM4B-201ENST00000159111 CCDC112Q8NEF3 446 aa20■□□□□ 0.79
KDM4B-201ENST00000159111 LIMCH1Q9UPQ0 1083 aa20■□□□□ 0.79
KDM4B-201ENST00000159111 ASXL2Q76L83 1435 aa20■□□□□ 0.79
KDM4B-201ENST00000159111 PTCD1O75127 700 aaKnown RBP20■□□□□ 0.79
KDM4B-201ENST00000159111 CWC15Q9P013 229 aaKnown RBP20■□□□□ 0.79
KDM4B-201ENST00000159111 ARHGEF12Q9NZN5 1544 aa20■□□□□ 0.79
KDM4B-201ENST00000159111 MAP3K12Q12852 859 aa20■□□□□ 0.79
KDM4B-201ENST00000159111 SF3B2Q13435 895 aaKnown RBP20■□□□□ 0.79
KDM4B-201ENST00000159111 DDX11Q96FC9 970 aa20■□□□□ 0.79
KDM4B-201ENST00000159111 CCDC85AQ96PX6 553 aaPredicted RBP20■□□□□ 0.79
KDM4B-201ENST00000159111 RBM5P52756 815 aaKnown RBP eCLIP19.99■□□□□ 0.793e-6■■■□□ 15.8
KDM4B-201ENST00000159111 SPINK5Q9NQ38 1064 aaPredicted RBP19.99■□□□□ 0.79
KDM4B-201ENST00000159111 IFNL2Q8IZJ0 200 aa19.99■□□□□ 0.79
KDM4B-201ENST00000159111 DEF6Q9H4E7 631 aa19.99■□□□□ 0.79
KDM4B-201ENST00000159111 TMEM132AQ24JP5 1023 aa19.99■□□□□ 0.79
KDM4B-201ENST00000159111 WWC2Q6AWC2 1192 aa19.99■□□□□ 0.79
KDM4B-201ENST00000159111 KRT28Q7Z3Y7 464 aa19.99■□□□□ 0.79
KDM4B-201ENST00000159111 MAP3K2Q9Y2U5 619 aa19.98■□□□□ 0.79
KDM4B-201ENST00000159111 ANKRD18BA2A2Z9 1011 aa19.98■□□□□ 0.79
KDM4B-201ENST00000159111 ECHDC1Q9NTX5 307 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms