RNA–Protein interactions for RNA: ENST00000055077.7

RFC2-201, Transcript of replication factor C subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC2, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-201ENST00000055077 DCAF5Q96JK2 942 aa29.83■■■□□ 2.37
RFC2-201ENST00000055077 SHANK3Q9BYB0 1731 aa29.83■■■□□ 2.37
RFC2-201ENST00000055077 BTBD11A6QL63 1104 aa29.82■■■□□ 2.36
RFC2-201ENST00000055077 TRIM27P14373 513 aa29.82■■■□□ 2.36
RFC2-201ENST00000055077 FTSJ3Q8IY81 847 aaKnown RBP29.82■■■□□ 2.36
RFC2-201ENST00000055077 USP35Q9P2H5 1018 aa29.82■■■□□ 2.36
RFC2-201ENST00000055077 DZIP1LQ8IYY4 767 aaKnown RBP29.81■■■□□ 2.36
RFC2-201ENST00000055077 TNNQ9UQP3 1299 aa29.81■■■□□ 2.36
RFC2-201ENST00000055077 DISP2A7MBM2 1401 aa29.8■■■□□ 2.36
RFC2-201ENST00000055077 RLBP1P12271 317 aa29.8■■■□□ 2.36
RFC2-201ENST00000055077 SLIT2O94813 1529 aa29.8■■■□□ 2.36
RFC2-201ENST00000055077 WNK3Q9BYP7 1800 aa29.8■■■□□ 2.36
RFC2-201ENST00000055077 ARHGAP45Q92619 1136 aa29.79■■■□□ 2.36
RFC2-201ENST00000055077 CLUAP1Q96AJ1 413 aa29.79■■■□□ 2.36
RFC2-201ENST00000055077 COG6Q9Y2V7 657 aa29.79■■■□□ 2.36
RFC2-201ENST00000055077 SLC52A2Q9HAB3 445 aa29.79■■■□□ 2.36
RFC2-201ENST00000055077 TCERG1O14776 1098 aaKnown RBP29.78■■■□□ 2.36
RFC2-201ENST00000055077 SPATA31A6Q5VVP1 1343 aa29.77■■■□□ 2.36
RFC2-201ENST00000055077 EIF4A1P60842 406 aaKnown RBP29.77■■■□□ 2.36
RFC2-201ENST00000055077 HOXB7P09629 217 aa29.74■■■□□ 2.35
RFC2-201ENST00000055077 MVPQ14764 893 aaKnown RBP29.74■■■□□ 2.35
RFC2-201ENST00000055077 PELP1Q8IZL8 1130 aaKnown RBP29.74■■■□□ 2.35
RFC2-201ENST00000055077 AAMPQ13685 434 aa29.72■■■□□ 2.35
RFC2-201ENST00000055077 NKX1-1Q15270 411 aaPredicted RBP29.72■■■□□ 2.35
RFC2-201ENST00000055077 KCNQ3O43525 872 aa29.72■■■□□ 2.35
RFC2-201ENST00000055077 CCDC30Q5VVM6 783 aa29.72■■■□□ 2.35
RFC2-201ENST00000055077 API5Q9BZZ5 524 aaKnown RBP29.71■■■□□ 2.35
RFC2-201ENST00000055077 THRAP3Q9Y2W1 955 aaKnown RBP29.71■■■□□ 2.35
RFC2-201ENST00000055077 SPATA31A1Q5TZJ5 1347 aa29.71■■■□□ 2.35
RFC2-201ENST00000055077 NFATC2IPQ8NCF5 419 aa29.7■■■□□ 2.35
RFC2-201ENST00000055077 STK31Q9BXU1 1019 aa29.7■■■□□ 2.35
RFC2-201ENST00000055077 DDX54Q8TDD1 881 aaKnown RBP29.69■■■□□ 2.34
RFC2-201ENST00000055077 CHMP4AQ9BY43 222 aa29.69■■■□□ 2.34
RFC2-201ENST00000055077 LRP6O75581 1613 aa29.69■■■□□ 2.34
RFC2-201ENST00000055077 HEG1Q9ULI3 1381 aa29.69■■■□□ 2.34
RFC2-201ENST00000055077 PTPRCP08575 1304 aa29.69■■■□□ 2.34
RFC2-201ENST00000055077 HSPA1LP34931 641 aa29.69■■■□□ 2.34
RFC2-201ENST00000055077 CDCA7Q9BWT1 371 aaPredicted RBP29.69■■■□□ 2.34
RFC2-201ENST00000055077 ABCC4O15439 1325 aa29.68■■■□□ 2.34
RFC2-201ENST00000055077 SLC4A2P04920 1241 aa29.68■■■□□ 2.34
RFC2-201ENST00000055077 CABP4P57796 275 aa29.68■■■□□ 2.34
RFC2-201ENST00000055077 HDGFL1Q5TGJ6 251 aa29.67■■■□□ 2.34
RFC2-201ENST00000055077 ZNF790Q6PG37 636 aa29.67■■■□□ 2.34
RFC2-201ENST00000055077 ITPRIPQ8IWB1 547 aa29.67■■■□□ 2.34
RFC2-201ENST00000055077 TMEM57Q8N5G2 664 aa29.67■■■□□ 2.34
RFC2-201ENST00000055077 DDX19BQ9UMR2 479 aa29.67■■■□□ 2.34
RFC2-201ENST00000055077 CACNA1FO60840 1977 aa29.67■■■□□ 2.34
RFC2-201ENST00000055077 TNS2Q63HR2 1409 aa29.67■■■□□ 2.34
RFC2-201ENST00000055077 SPATA31A5Q5VU36 1347 aa29.67■■■□□ 2.34
RFC2-201ENST00000055077 SPATA31A7Q8IWB4 1347 aa29.67■■■□□ 2.34
RFC2-201ENST00000055077 ERVV-2B6SEH9 535 aa29.66■■■□□ 2.34
RFC2-201ENST00000055077 C8orf37Q96NL8 207 aa29.66■■■□□ 2.34
RFC2-201ENST00000055077 UNC5CLQ8IV45 518 aa29.65■■■□□ 2.34
RFC2-201ENST00000055077 NGLY1Q96IV0 654 aa29.64■■■□□ 2.34
RFC2-201ENST00000055077 RGS12O14924 1447 aa29.64■■■□□ 2.34
RFC2-201ENST00000055077 TOGARAM1Q9Y4F4 1720 aa29.64■■■□□ 2.34
RFC2-201ENST00000055077 GIGYF1O75420 1035 aaPredicted RBP29.63■■■□□ 2.33
RFC2-201ENST00000055077 BCL9LQ86UU0 1499 aa29.62■■■□□ 2.33
RFC2-201ENST00000055077 SLC39A6Q13433 755 aa29.62■■■□□ 2.33
RFC2-201ENST00000055077 TTC5Q8N0Z6 440 aa29.62■■■□□ 2.33
RFC2-201ENST00000055077 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.61■■■□□ 2.33
RFC2-201ENST00000055077 EXOC5O00471 708 aa29.61■■■□□ 2.33
RFC2-201ENST00000055077 FNBP4Q8N3X1 1017 aaPredicted RBP29.61■■■□□ 2.33
RFC2-201ENST00000055077 NECTIN2Q92692 538 aa29.61■■■□□ 2.33
RFC2-201ENST00000055077 PAPPAQ13219 1627 aa29.61■■■□□ 2.33
RFC2-201ENST00000055077 CCDC9Q9Y3X0 531 aaKnown RBP29.6■■■□□ 2.33
RFC2-201ENST00000055077 BARGINQ6ZT62 677 aa29.6■■■□□ 2.33
RFC2-201ENST00000055077 EIF2S2P20042 333 aaKnown RBP29.59■■■□□ 2.33
RFC2-201ENST00000055077 G2E3Q7L622 706 aa29.58■■■□□ 2.33
RFC2-201ENST00000055077 C5P01031 1676 aa29.57■■■□□ 2.32
RFC2-201ENST00000055077 FLIIQ13045 1269 aa29.57■■■□□ 2.32
RFC2-201ENST00000055077 VPS72Q15906 364 aa29.57■■■□□ 2.32
RFC2-201ENST00000055077 CHMP4BQ9H444 224 aaKnown RBP29.56■■■□□ 2.32
RFC2-201ENST00000055077 UBR2Q8IWV8 1755 aa29.56■■■□□ 2.32
RFC2-201ENST00000055077 FMNL2Q96PY5 1086 aa29.56■■■□□ 2.32
RFC2-201ENST00000055077 KDM2BQ8NHM5 1336 aa29.56■■■□□ 2.32
RFC2-201ENST00000055077 CENPQQ7L2Z9 268 aaPredicted RBP29.55■■■□□ 2.32
RFC2-201ENST00000055077 ZNF496Q96IT1 587 aaPredicted RBP29.55■■■□□ 2.32
RFC2-201ENST00000055077 GLI3P10071 1580 aa29.55■■■□□ 2.32
RFC2-201ENST00000055077 DDB1Q16531 1140 aa29.54■■■□□ 2.32
RFC2-201ENST00000055077 CHPF2Q9P2E5 772 aa29.54■■■□□ 2.32
RFC2-201ENST00000055077 MEX3CQ5U5Q3 659 aaKnown RBP29.53■■■□□ 2.32
RFC2-201ENST00000055077 INTS3Q68E01 1043 aaKnown RBP29.53■■■□□ 2.32
RFC2-201ENST00000055077 TMOD3Q9NYL9 352 aa29.53■■■□□ 2.32
RFC2-201ENST00000055077 DBF4Q9UBU7 674 aaPredicted RBP29.53■■■□□ 2.32
RFC2-201ENST00000055077 PRAMEF22A3QJZ6 481 aa29.52■■■□□ 2.32
RFC2-201ENST00000055077 FKBP5Q13451 457 aaPredicted RBP29.52■■■□□ 2.32
RFC2-201ENST00000055077 ZBTB40Q9NUA8 1239 aa29.52■■■□□ 2.32
RFC2-201ENST00000055077 USP21Q9UK80 565 aa29.52■■■□□ 2.32
RFC2-201ENST00000055077 LAMB4A4D0S4 1761 aa29.51■■■□□ 2.32
RFC2-201ENST00000055077 SNRPA1P09661 255 aaKnown RBP29.51■■■□□ 2.31
RFC2-201ENST00000055077 ITGB4P16144 1822 aa29.5■■■□□ 2.31
RFC2-201ENST00000055077 KCPQ6ZWJ8 1503 aa29.5■■■□□ 2.31
RFC2-201ENST00000055077 ZBTB7BO15156 539 aaPredicted RBP29.5■■■□□ 2.31
RFC2-201ENST00000055077 PCDHB15Q9Y5E8 787 aa29.5■■■□□ 2.31
RFC2-201ENST00000055077 PXDNLA1KZ92 1463 aa29.49■■■□□ 2.31
RFC2-201ENST00000055077 N4BP2Q86UW6 1770 aaPredicted RBP29.48■■■□□ 2.31
RFC2-201ENST00000055077 DOT1LQ8TEK3 1739 aa29.48■■■□□ 2.31
RFC2-201ENST00000055077 PHAXQ9H814 394 aaKnown RBP29.47■■■□□ 2.31
RFC2-201ENST00000055077 F6X3S4 739 aa29.46■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms