RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 SCN11AQ9UI33 1791 aa28.31■■■□□ 2.12
HOXC8-201ENST00000040584 CDCA7Q9BWT1 371 aaPredicted RBP28.3■■■□□ 2.12
HOXC8-201ENST00000040584 EXOC5O00471 708 aa28.29■■■□□ 2.12
HOXC8-201ENST00000040584 PLIN1O60240 522 aa28.29■■■□□ 2.12
HOXC8-201ENST00000040584 VAMP4O75379 141 aa28.29■■■□□ 2.12
HOXC8-201ENST00000040584 TWISTNBQ3B726 338 aaPredicted RBP28.29■■■□□ 2.12
HOXC8-201ENST00000040584 BARGINQ6ZT62 677 aa28.29■■■□□ 2.12
HOXC8-201ENST00000040584 BTBD11A6QL63 1104 aa28.29■■■□□ 2.12
HOXC8-201ENST00000040584 BCL2L13Q9BXK5 485 aa28.29■■■□□ 2.12
HOXC8-201ENST00000040584 NKX1-1Q15270 411 aaPredicted RBP28.28■■■□□ 2.12
HOXC8-201ENST00000040584 SLC52A2Q9HAB3 445 aa28.28■■■□□ 2.12
HOXC8-201ENST00000040584 NFATC2IPQ8NCF5 419 aa28.27■■■□□ 2.12
HOXC8-201ENST00000040584 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.27■■■□□ 2.12
HOXC8-201ENST00000040584 FAM98CQ17RN3 349 aaKnown RBP28.26■■■□□ 2.11
HOXC8-201ENST00000040584 FBXO41Q8TF61 875 aa28.25■■■□□ 2.11
HOXC8-201ENST00000040584 KCNQ3O43525 872 aa28.25■■■□□ 2.11
HOXC8-201ENST00000040584 SSH1Q8WYL5 1049 aa28.25■■■□□ 2.11
HOXC8-201ENST00000040584 SIPA1L3O60292 1781 aaPredicted RBP28.25■■■□□ 2.11
HOXC8-201ENST00000040584 DDB1Q16531 1140 aa28.24■■■□□ 2.11
HOXC8-201ENST00000040584 ZNF428Q96B54 188 aa28.24■■■□□ 2.11
HOXC8-201ENST00000040584 TNS2Q63HR2 1409 aa28.24■■■□□ 2.11
HOXC8-201ENST00000040584 CABP4P57796 275 aa28.23■■■□□ 2.11
HOXC8-201ENST00000040584 SMC4Q9NTJ3 1288 aa28.23■■■□□ 2.11
HOXC8-201ENST00000040584 MRC1P22897 1456 aa28.22■■■□□ 2.11
HOXC8-201ENST00000040584 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.22■■■□□ 2.11
HOXC8-201ENST00000040584 KDM3BQ7LBC6 1761 aa28.22■■■□□ 2.11
HOXC8-201ENST00000040584 ERVV-2B6SEH9 535 aa28.2■■■□□ 2.1
HOXC8-201ENST00000040584 TCERG1O14776 1098 aaKnown RBP28.2■■■□□ 2.1
HOXC8-201ENST00000040584 EIF4A1P60842 406 aaKnown RBP28.2■■■□□ 2.1
HOXC8-201ENST00000040584 ALDH1L2Q3SY69 923 aa28.19■■■□□ 2.1
HOXC8-201ENST00000040584 GJD4Q96KN9 370 aaPredicted RBP28.19■■■□□ 2.1
HOXC8-201ENST00000040584 SLC39A6Q13433 755 aa28.19■■■□□ 2.1
HOXC8-201ENST00000040584 FRAT1Q92837 279 aaPredicted RBP28.19■■■□□ 2.1
HOXC8-201ENST00000040584 TRPC5Q9UL62 973 aaPredicted RBP28.19■■■□□ 2.1
HOXC8-201ENST00000040584 ATRNO75882 1429 aa28.18■■■□□ 2.1
HOXC8-201ENST00000040584 C20orf194Q5TEA3 1177 aa28.17■■■□□ 2.1
HOXC8-201ENST00000040584 ZNF790Q6PG37 636 aa28.16■■■□□ 2.1
HOXC8-201ENST00000040584 TOGARAM1Q9Y4F4 1720 aa28.16■■■□□ 2.1
HOXC8-201ENST00000040584 A0A0G2JS52 829 aa28.15■■■□□ 2.1
HOXC8-201ENST00000040584 CANXP27824 592 aaKnown RBP28.15■■■□□ 2.1
HOXC8-201ENST00000040584 MARCH10Q8NA82 808 aaPredicted RBP28.15■■■□□ 2.1
HOXC8-201ENST00000040584 QTRT2Q9H974 415 aaKnown RBP28.15■■■□□ 2.1
HOXC8-201ENST00000040584 GLI3P10071 1580 aa28.15■■■□□ 2.1
HOXC8-201ENST00000040584 MSH5O43196 834 aa28.13■■■□□ 2.09
HOXC8-201ENST00000040584 BRPF1P55201 1214 aaPredicted RBP28.13■■■□□ 2.09
HOXC8-201ENST00000040584 MRPL50Q8N5N7 158 aaKnown RBP28.13■■■□□ 2.09
HOXC8-201ENST00000040584 NOB1Q9ULX3 412 aaKnown RBP28.12■■■□□ 2.09
HOXC8-201ENST00000040584 ERICH6Q7L0X2 663 aa28.11■■■□□ 2.09
HOXC8-201ENST00000040584 TMOD3Q9NYL9 352 aa28.11■■■□□ 2.09
HOXC8-201ENST00000040584 TTC5Q8N0Z6 440 aa28.1■■■□□ 2.09
HOXC8-201ENST00000040584 NECTIN2Q92692 538 aa28.1■■■□□ 2.09
HOXC8-201ENST00000040584 SOS1Q07889 1333 aaPredicted RBP28.1■■■□□ 2.09
HOXC8-201ENST00000040584 PDE3AQ14432 1141 aa28.1■■■□□ 2.09
HOXC8-201ENST00000040584 HEG1Q9ULI3 1381 aa28.09■■■□□ 2.09
HOXC8-201ENST00000040584 TNNQ9UQP3 1299 aa28.09■■■□□ 2.09
HOXC8-201ENST00000040584 KIF16BQ96L93 1317 aa28.08■■■□□ 2.09
HOXC8-201ENST00000040584 ZKSCAN2Q63HK3 967 aa28.08■■■□□ 2.09
HOXC8-201ENST00000040584 PIGBQ92521 554 aa28.08■■■□□ 2.09
HOXC8-201ENST00000040584 ZNF496Q96IT1 587 aaPredicted RBP28.08■■■□□ 2.09
HOXC8-201ENST00000040584 THSD7AQ9UPZ6 1657 aa28.08■■■□□ 2.09
HOXC8-201ENST00000040584 GIGYF1O75420 1035 aaPredicted RBP28.08■■■□□ 2.09
HOXC8-201ENST00000040584 EXOC6Q8TAG9 804 aa28.07■■■□□ 2.08
HOXC8-201ENST00000040584 PRAMEF22A3QJZ6 481 aa28.06■■■□□ 2.08
HOXC8-201ENST00000040584 HOXB7P09629 217 aa28.06■■■□□ 2.08
HOXC8-201ENST00000040584 EIF2S2P20042 333 aaKnown RBP28.06■■■□□ 2.08
HOXC8-201ENST00000040584 CCDC30Q5VVM6 783 aa28.06■■■□□ 2.08
HOXC8-201ENST00000040584 SYTL4Q96C24 671 aaPredicted RBP28.06■■■□□ 2.08
HOXC8-201ENST00000040584 CRBNQ96SW2 442 aa28.06■■■□□ 2.08
HOXC8-201ENST00000040584 KAT6BQ8WYB5 2073 aa28.06■■■□□ 2.08
HOXC8-201ENST00000040584 ONECUT3O60422 494 aaPredicted RBP28.06■■■□□ 2.08
HOXC8-201ENST00000040584 PRIM1P49642 420 aaKnown RBP28.06■■■□□ 2.08
HOXC8-201ENST00000040584 HDGFL1Q5TGJ6 251 aa28.06■■■□□ 2.08
HOXC8-201ENST00000040584 PANK1Q8TE04 598 aa28.06■■■□□ 2.08
HOXC8-201ENST00000040584 ITGB4P16144 1822 aa28.05■■■□□ 2.08
HOXC8-201ENST00000040584 SLC4A2P04920 1241 aa28.05■■■□□ 2.08
HOXC8-201ENST00000040584 CLUAP1Q96AJ1 413 aa28.05■■■□□ 2.08
HOXC8-201ENST00000040584 IPO8O15397 1037 aaKnown RBP28.04■■■□□ 2.08
HOXC8-201ENST00000040584 TRIM27P14373 513 aa28.04■■■□□ 2.08
HOXC8-201ENST00000040584 ATF7IPQ6VMQ6 1270 aa28.04■■■□□ 2.08
HOXC8-201ENST00000040584 ACSBG1Q96GR2 724 aa28.04■■■□□ 2.08
HOXC8-201ENST00000040584 FMNL2Q96PY5 1086 aa28.04■■■□□ 2.08
HOXC8-201ENST00000040584 DOT1LQ8TEK3 1739 aa28.04■■■□□ 2.08
HOXC8-201ENST00000040584 ZNF772Q68DY9 489 aaPredicted RBP28.03■■■□□ 2.08
HOXC8-201ENST00000040584 STK31Q9BXU1 1019 aa28.03■■■□□ 2.08
HOXC8-201ENST00000040584 BCL9O00512 1426 aa28.02■■■□□ 2.08
HOXC8-201ENST00000040584 RLBP1P12271 317 aa28.02■■■□□ 2.08
HOXC8-201ENST00000040584 SEPT12Q8IYM1 358 aa28.02■■■□□ 2.08
HOXC8-201ENST00000040584 ASAP1Q9ULH1 1129 aa28.02■■■□□ 2.08
HOXC8-201ENST00000040584 PAPPAQ13219 1627 aa28.01■■■□□ 2.07
HOXC8-201ENST00000040584 PTCD1O75127 700 aaKnown RBP28■■■□□ 2.07
HOXC8-201ENST00000040584 SNRPA1P09661 255 aaKnown RBP28■■■□□ 2.07
HOXC8-201ENST00000040584 DZIP1LQ8IYY4 767 aaKnown RBP28■■■□□ 2.07
HOXC8-201ENST00000040584 ARHGAP45Q92619 1136 aa28■■■□□ 2.07
HOXC8-201ENST00000040584 ATG3Q9NT62 314 aa28■■■□□ 2.07
HOXC8-201ENST00000040584 G2E3Q7L622 706 aa27.99■■■□□ 2.07
HOXC8-201ENST00000040584 FTSJ3Q8IY81 847 aaKnown RBP27.99■■■□□ 2.07
HOXC8-201ENST00000040584 KCPQ6ZWJ8 1503 aa27.98■■■□□ 2.07
HOXC8-201ENST00000040584 MS4A1P11836 297 aa27.98■■■□□ 2.07
HOXC8-201ENST00000040584 COG6Q9Y2V7 657 aa27.98■■■□□ 2.07
HOXC8-201ENST00000040584 UBR2Q8IWV8 1755 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms