RNA–Protein interactions for RNA: ENST00000013034.3

NME1-201, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 3 BASIC

Gene NME1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-201ENST00000013034 C10orf71Q711Q0 1435 aa15.49■□□□□ 0.07
NME1-201ENST00000013034 ZNF831Q5JPB2 1677 aa15.48■□□□□ 0.07
NME1-201ENST00000013034 KIF13BQ9NQT8 1826 aa15.48■□□□□ 0.07
NME1-201ENST00000013034 KIF3CO14782 793 aa15.48■□□□□ 0.07
NME1-201ENST00000013034 PPM1GO15355 546 aaPredicted RBP15.48■□□□□ 0.07
NME1-201ENST00000013034 PHKG2P15735 406 aa15.48■□□□□ 0.07
NME1-201ENST00000013034 ATP6V1AP38606 617 aa15.48■□□□□ 0.07
NME1-201ENST00000013034 ITPK1Q13572 414 aa15.48■□□□□ 0.07
NME1-201ENST00000013034 IFNL2Q8IZJ0 200 aa15.48■□□□□ 0.07
NME1-201ENST00000013034 ASAP1Q9ULH1 1129 aa15.48■□□□□ 0.07
NME1-201ENST00000013034 KIAA1551Q9HCM1 1747 aa15.48■□□□□ 0.07
NME1-201ENST00000013034 MMP10P09238 476 aa15.47■□□□□ 0.07
NME1-201ENST00000013034 EYA1Q99502 592 aa15.47■□□□□ 0.07
NME1-201ENST00000013034 TGFB2P61812 414 aa15.46■□□□□ 0.07
NME1-201ENST00000013034 ADRA2BP18089 450 aa15.45■□□□□ 0.06
NME1-201ENST00000013034 ATG3Q9NT62 314 aa15.45■□□□□ 0.06
NME1-201ENST00000013034 C4AP0C0L4 1744 aa15.44■□□□□ 0.06
NME1-201ENST00000013034 NLGN1Q8N2Q7 840 aa15.44■□□□□ 0.06
NME1-201ENST00000013034 RTCBQ9Y3I0 505 aaKnown RBP15.44■□□□□ 0.06
NME1-201ENST00000013034 CNTNAP4Q9C0A0 1308 aa15.43■□□□□ 0.06
NME1-201ENST00000013034 COL5A3P25940 1745 aaPredicted RBP15.43■□□□□ 0.06
NME1-201ENST00000013034 APLP1P51693 650 aa15.43■□□□□ 0.06
NME1-201ENST00000013034 POLKQ9UBT6 870 aa15.43■□□□□ 0.06
NME1-201ENST00000013034 HSP90AB1P08238 724 aaKnown RBP15.42■□□□□ 0.06
NME1-201ENST00000013034 EIF4A2Q14240 407 aaKnown RBP15.42■□□□□ 0.06
NME1-201ENST00000013034 TRAPPC3LQ5T215 181 aa15.42■□□□□ 0.06
NME1-201ENST00000013034 CCDC87Q9NVE4 849 aa15.42■□□□□ 0.06
NME1-201ENST00000013034 BCS1LQ9Y276 419 aa15.42■□□□□ 0.06
NME1-201ENST00000013034 ERVV-2B6SEH9 535 aa15.41■□□□□ 0.06
NME1-201ENST00000013034 TOMM70O94826 608 aa15.41■□□□□ 0.06
NME1-201ENST00000013034 RC3H1Q5TC82 1133 aaKnown RBP15.41■□□□□ 0.06
NME1-201ENST00000013034 DCAF5Q96JK2 942 aa15.41■□□□□ 0.06
NME1-201ENST00000013034 N4BP2Q86UW6 1770 aaPredicted RBP15.4■□□□□ 0.06
NME1-201ENST00000013034 GYS1P13807 737 aa15.4■□□□□ 0.06
NME1-201ENST00000013034 RBM42Q9BTD8 480 aaKnown RBP15.4■□□□□ 0.06
NME1-201ENST00000013034 KDM6AO15550 1401 aaPredicted RBP15.4■□□□□ 0.06
NME1-201ENST00000013034 A0A0G2JLW4 131 aa15.39■□□□□ 0.05
NME1-201ENST00000013034 ARHGEF1Q92888 912 aaKnown RBP15.39■□□□□ 0.05
NME1-201ENST00000013034 SLC4A9Q96Q91 983 aa15.39■□□□□ 0.05
NME1-201ENST00000013034 PARP3Q9Y6F1 533 aa15.39■□□□□ 0.05
NME1-201ENST00000013034 BRCA1P38398 1863 aaKnown RBP15.38■□□□□ 0.05
NME1-201ENST00000013034 RPS6KA4O75676 772 aa15.38■□□□□ 0.05
NME1-201ENST00000013034 RFC4P35249 363 aa15.38■□□□□ 0.05
NME1-201ENST00000013034 FCHSD2O94868 740 aa15.37■□□□□ 0.05
NME1-201ENST00000013034 DPEP1P16444 411 aa15.37■□□□□ 0.05
NME1-201ENST00000013034 ARHGAP27Q6ZUM4 889 aa15.37■□□□□ 0.05
NME1-201ENST00000013034 AMOTQ4VCS5 1084 aa15.36■□□□□ 0.05
NME1-201ENST00000013034 PLEKHO1Q53GL0 409 aaPredicted RBP15.36■□□□□ 0.05
NME1-201ENST00000013034 ZNF530Q6P9A1 599 aaPredicted RBP15.36■□□□□ 0.05
NME1-201ENST00000013034 NMRK2Q9NPI5 230 aa15.36■□□□□ 0.05
NME1-201ENST00000013034 ARFGEF1Q9Y6D6 1849 aa15.36■□□□□ 0.05
NME1-201ENST00000013034 CABP4P57796 275 aa15.35■□□□□ 0.05
NME1-201ENST00000013034 RBM46Q8TBY0 533 aaKnown RBP15.35■□□□□ 0.05
NME1-201ENST00000013034 WDR90Q96KV7 1748 aa15.34■□□□□ 0.05
NME1-201ENST00000013034 TNNT2P45379 298 aaPredicted RBP15.34■□□□□ 0.05
NME1-201ENST00000013034 TIMELESSQ9UNS1 1208 aa15.34■□□□□ 0.05
NME1-201ENST00000013034 USP42Q9H9J4 1324 aaKnown RBP15.34■□□□□ 0.05
NME1-201ENST00000013034 CRKLP46109 303 aaKnown RBP15.33■□□□□ 0.04
NME1-201ENST00000013034 C1orf141Q5JVX7 400 aa15.33■□□□□ 0.04
NME1-201ENST00000013034 C9orf131Q5VYM1 1079 aa15.33■□□□□ 0.04
NME1-201ENST00000013034 C16orf71Q8IYS4 520 aaPredicted RBP15.33■□□□□ 0.04
NME1-201ENST00000013034 DNAJC5GQ8N7S2 189 aa15.33■□□□□ 0.04
NME1-201ENST00000013034 PIM2Q9P1W9 311 aa15.33■□□□□ 0.04
NME1-201ENST00000013034 TJP1Q07157 1748 aa15.33■□□□□ 0.04
NME1-201ENST00000013034 KCNA3P22001 575 aa15.32■□□□□ 0.04
NME1-201ENST00000013034 FSTL1Q12841 308 aa15.32■□□□□ 0.04
NME1-201ENST00000013034 KDM2BQ8NHM5 1336 aa15.32■□□□□ 0.04
NME1-201ENST00000013034 KCPQ6ZWJ8 1503 aa15.32■□□□□ 0.04
NME1-201ENST00000013034 TNRC6CQ9HCJ0 1690 aaKnown RBP15.32■□□□□ 0.04
NME1-201ENST00000013034 PTCD1O75127 700 aaKnown RBP15.31■□□□□ 0.04
NME1-201ENST00000013034 MTHFSP49914 203 aa15.31■□□□□ 0.04
NME1-201ENST00000013034 DALRD3Q5D0E6 543 aaKnown RBP15.31■□□□□ 0.04
NME1-201ENST00000013034 MYH14Q7Z406 1995 aaKnown RBP15.31■□□□□ 0.04
NME1-201ENST00000013034 DDR1Q08345 913 aa15.3■□□□□ 0.04
NME1-201ENST00000013034 RNF181Q9P0P0 153 aa15.3■□□□□ 0.04
NME1-201ENST00000013034 SRP68Q9UHB9 627 aaKnown RBP15.3■□□□□ 0.04
NME1-201ENST00000013034 ADAMTS7Q9UKP4 1686 aa15.29■□□□□ 0.04
NME1-201ENST00000013034 MRC1P22897 1456 aa15.29■□□□□ 0.04
NME1-201ENST00000013034 ZC3H4Q9UPT8 1303 aaKnown RBP15.29■□□□□ 0.04
NME1-201ENST00000013034 FKBP8Q14318 412 aa15.29■□□□□ 0.04
NME1-201ENST00000013034 POLR3GLQ9BT43 218 aa15.29■□□□□ 0.04
NME1-201ENST00000013034 POLRMTO00411 1230 aaKnown RBP15.28■□□□□ 0.04
NME1-201ENST00000013034 AEBP1Q8IUX7 1158 aa15.28■□□□□ 0.04
NME1-201ENST00000013034 KLRG1Q96E93 195 aa15.28■□□□□ 0.04
NME1-201ENST00000013034 JMYQ8N9B5 988 aa15.27■□□□□ 0.04
NME1-201ENST00000013034 NFATC2IPQ8NCF5 419 aa15.27■□□□□ 0.04
NME1-201ENST00000013034 SCN11AQ9UI33 1791 aa15.26■□□□□ 0.03
NME1-201ENST00000013034 SOS1Q07889 1333 aaPredicted RBP15.25■□□□□ 0.03
NME1-201ENST00000013034 ZPR1O75312 459 aa15.25■□□□□ 0.03
NME1-201ENST00000013034 CHRNA5P30532 468 aa15.25■□□□□ 0.03
NME1-201ENST00000013034 SULT6B1Q6IMI4 303 aa15.25■□□□□ 0.03
NME1-201ENST00000013034 INTS5Q6P9B9 1019 aaKnown RBP15.25■□□□□ 0.03
NME1-201ENST00000013034 COL15A1P39059 1388 aa15.24■□□□□ 0.03
NME1-201ENST00000013034 NRXN2Q9P2S2 1712 aa15.24■□□□□ 0.03
NME1-201ENST00000013034 TM4SF1P30408 202 aa15.24■□□□□ 0.03
NME1-201ENST00000013034 AKAP4Q5JQC9 854 aa15.24■□□□□ 0.03
NME1-201ENST00000013034 MORC1Q86VD1 984 aa15.24■□□□□ 0.03
NME1-201ENST00000013034 SMC1BQ8NDV3 1235 aa15.24■□□□□ 0.03
NME1-201ENST00000013034 PANK3Q9H999 370 aa15.24■□□□□ 0.03
NME1-201ENST00000013034 USPL1Q5W0Q7 1092 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms