RNA–Protein interactions for RNA: ENST00000011691.5

SS18L2-201, Transcript of SS18 like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SS18L2, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L2-201ENST00000011691 LINC00116Q8NCU8 138 aa21.31■■□□□ 1
SS18L2-201ENST00000011691 AEBP1Q8IUX7 1158 aa21.3■■□□□ 1
SS18L2-201ENST00000011691 FLAD1Q8NFF5 587 aa21.3■■□□□ 1
SS18L2-201ENST00000011691 ZNF784Q8NCA9 323 aaPredicted RBP21.29■■□□□ 1
SS18L2-201ENST00000011691 VIRMAQ69YN4 1812 aaKnown RBP21.29■■□□□ 1
SS18L2-201ENST00000011691 KIF7Q2M1P5 1343 aa21.29■■□□□ 1
SS18L2-201ENST00000011691 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.28■■□□□ 1
SS18L2-201ENST00000011691 HMGB2P26583 209 aaKnown RBP21.28■■□□□ 1
SS18L2-201ENST00000011691 ATP6V1AP38606 617 aa21.28■■□□□ 1
SS18L2-201ENST00000011691 ITPK1Q13572 414 aa21.28■■□□□ 1
SS18L2-201ENST00000011691 ATG3Q9NT62 314 aa21.28■■□□□ 1
SS18L2-201ENST00000011691 COL5A3P25940 1745 aaPredicted RBP21.27■■□□□ 1
SS18L2-201ENST00000011691 PLEKHO1Q53GL0 409 aaPredicted RBP21.27■■□□□ 1
SS18L2-201ENST00000011691 ZNF530Q6P9A1 599 aaPredicted RBP21.27■■□□□ 1
SS18L2-201ENST00000011691 KDM6AO15550 1401 aaPredicted RBP21.26■□□□□ 0.99
SS18L2-201ENST00000011691 PLEKHG2Q9H7P9 1386 aa21.25■□□□□ 0.99
SS18L2-201ENST00000011691 GNPATO15228 680 aa21.25■□□□□ 0.99
SS18L2-201ENST00000011691 SCN11AQ9UI33 1791 aa21.25■□□□□ 0.99
SS18L2-201ENST00000011691 AMER1Q5JTC6 1135 aaPredicted RBP21.24■□□□□ 0.99
SS18L2-201ENST00000011691 SULT6B1Q6IMI4 303 aa21.24■□□□□ 0.99
SS18L2-201ENST00000011691 DCAF5Q96JK2 942 aa21.24■□□□□ 0.99
SS18L2-201ENST00000011691 RBM42Q9BTD8 480 aaKnown RBP21.24■□□□□ 0.99
SS18L2-201ENST00000011691 ZNF831Q5JPB2 1677 aa21.24■□□□□ 0.99
SS18L2-201ENST00000011691 ERVV-2B6SEH9 535 aa21.23■□□□□ 0.99
SS18L2-201ENST00000011691 YBX3P16989 372 aaKnown RBP eCLIP21.23■□□□□ 0.999e-7■□□□□ 10.6
SS18L2-201ENST00000011691 SSFA2P28290 1259 aa21.23■□□□□ 0.99
SS18L2-201ENST00000011691 KDRP35968 1356 aa21.23■□□□□ 0.99
SS18L2-201ENST00000011691 HSP90AB1P08238 724 aaKnown RBP21.22■□□□□ 0.99
SS18L2-201ENST00000011691 CABP4P57796 275 aa21.22■□□□□ 0.99
SS18L2-201ENST00000011691 AMOTQ4VCS5 1084 aa21.22■□□□□ 0.99
SS18L2-201ENST00000011691 MYH14Q7Z406 1995 aaKnown RBP21.21■□□□□ 0.99
SS18L2-201ENST00000011691 IL13P35225 146 aa21.21■□□□□ 0.99
SS18L2-201ENST00000011691 CNGB1Q14028 1251 aaPredicted RBP21.21■□□□□ 0.99
SS18L2-201ENST00000011691 C1orf141Q5JVX7 400 aa21.21■□□□□ 0.99
SS18L2-201ENST00000011691 SLC4A9Q96Q91 983 aa21.21■□□□□ 0.99
SS18L2-201ENST00000011691 MTHFSP49914 203 aa21.2■□□□□ 0.98
SS18L2-201ENST00000011691 C4AP0C0L4 1744 aa21.2■□□□□ 0.98
SS18L2-201ENST00000011691 CC2D1BQ5T0F9 858 aaKnown RBP21.19■□□□□ 0.98
SS18L2-201ENST00000011691 WWC3Q9ULE0 1092 aa21.19■□□□□ 0.98
SS18L2-201ENST00000011691 CD2APQ9Y5K6 639 aa21.19■□□□□ 0.98
SS18L2-201ENST00000011691 TJP1Q07157 1748 aa21.18■□□□□ 0.98
SS18L2-201ENST00000011691 PTCD1O75127 700 aaKnown RBP21.16■□□□□ 0.98
SS18L2-201ENST00000011691 HMOX1P09601 288 aa21.16■□□□□ 0.98
SS18L2-201ENST00000011691 NFATC2IPQ8NCF5 419 aa21.16■□□□□ 0.98
SS18L2-201ENST00000011691 N4BP2Q86UW6 1770 aaPredicted RBP21.15■□□□□ 0.98
SS18L2-201ENST00000011691 GRIN3BO60391 1043 aa21.15■□□□□ 0.98
SS18L2-201ENST00000011691 RTCBQ9Y3I0 505 aaKnown RBP21.15■□□□□ 0.98
SS18L2-201ENST00000011691 CICQ96RK0 1608 aaPredicted RBP21.15■□□□□ 0.98
SS18L2-201ENST00000011691 PER1O15534 1290 aaPredicted RBP21.14■□□□□ 0.97
SS18L2-201ENST00000011691 TRAPPC3LQ5T215 181 aa21.14■□□□□ 0.97
SS18L2-201ENST00000011691 KIF13BQ9NQT8 1826 aa21.13■□□□□ 0.97
SS18L2-201ENST00000011691 KIAA1551Q9HCM1 1747 aa21.12■□□□□ 0.97
SS18L2-201ENST00000011691 MMP10P09238 476 aa21.12■□□□□ 0.97
SS18L2-201ENST00000011691 CNTNAP4Q9C0A0 1308 aa21.11■□□□□ 0.97
SS18L2-201ENST00000011691 ARHGEF1Q92888 912 aaKnown RBP21.11■□□□□ 0.97
SS18L2-201ENST00000011691 AKAP4Q5JQC9 854 aa21.1■□□□□ 0.97
SS18L2-201ENST00000011691 RC3H1Q5TC82 1133 aaKnown RBP21.1■□□□□ 0.97
SS18L2-201ENST00000011691 LGR6Q9HBX8 967 aa21.1■□□□□ 0.97
SS18L2-201ENST00000011691 DIAPH1O60610 1272 aaKnown RBP21.09■□□□□ 0.97
SS18L2-201ENST00000011691 RPS6KA4O75676 772 aa21.09■□□□□ 0.97
SS18L2-201ENST00000011691 RFC4P35249 363 aa21.09■□□□□ 0.97
SS18L2-201ENST00000011691 CRKLP46109 303 aaKnown RBP21.08■□□□□ 0.97
SS18L2-201ENST00000011691 ADAMTS7Q9UKP4 1686 aa21.07■□□□□ 0.96
SS18L2-201ENST00000011691 COL3A1P02461 1466 aaPredicted RBP21.07■□□□□ 0.96
SS18L2-201ENST00000011691 MRC1P22897 1456 aa21.07■□□□□ 0.96
SS18L2-201ENST00000011691 GYS1P13807 737 aa21.06■□□□□ 0.96
SS18L2-201ENST00000011691 MTHFSDQ2M296 383 aaKnown RBP21.06■□□□□ 0.96
SS18L2-201ENST00000011691 NLGN1Q8N2Q7 840 aa21.06■□□□□ 0.96
SS18L2-201ENST00000011691 SLC52A2Q9HAB3 445 aa21.06■□□□□ 0.96
SS18L2-201ENST00000011691 RNMTO43148 476 aaKnown RBP21.05■□□□□ 0.96
SS18L2-201ENST00000011691 GIGYF1O75420 1035 aaPredicted RBP21.05■□□□□ 0.96
SS18L2-201ENST00000011691 C1QTNF8P60827 252 aa21.05■□□□□ 0.96
SS18L2-201ENST00000011691 SLC39A6Q13433 755 aa21.05■□□□□ 0.96
SS18L2-201ENST00000011691 SRP68Q9UHB9 627 aaKnown RBP21.05■□□□□ 0.96
SS18L2-201ENST00000011691 PXDNLA1KZ92 1463 aa21.05■□□□□ 0.96
SS18L2-201ENST00000011691 ATP10DQ9P241 1426 aa21.04■□□□□ 0.96
SS18L2-201ENST00000011691 U2SURPO15042 1029 aaKnown RBP21.04■□□□□ 0.96
SS18L2-201ENST00000011691 UBR2Q8IWV8 1755 aa21.04■□□□□ 0.96
SS18L2-201ENST00000011691 BRCA1P38398 1863 aaKnown RBP21.04■□□□□ 0.96
SS18L2-201ENST00000011691 DNAJC10Q8IXB1 793 aa21.03■□□□□ 0.96
SS18L2-201ENST00000011691 KCPQ6ZWJ8 1503 aa21.03■□□□□ 0.96
SS18L2-201ENST00000011691 C10orf71Q711Q0 1435 aa21.03■□□□□ 0.96
SS18L2-201ENST00000011691 NPC1L1Q9UHC9 1359 aa21.02■□□□□ 0.96
SS18L2-201ENST00000011691 PARP3Q9Y6F1 533 aa21.02■□□□□ 0.96
SS18L2-201ENST00000011691 SIPA1L3O60292 1781 aaPredicted RBP21.01■□□□□ 0.95
SS18L2-201ENST00000011691 SENP3-EIF4A1A0A087X0R7 540 aa21.01■□□□□ 0.95
SS18L2-201ENST00000011691 A0A0G2JLW4 131 aa21.01■□□□□ 0.95
SS18L2-201ENST00000011691 INTS5Q6P9B9 1019 aaKnown RBP21.01■□□□□ 0.95
SS18L2-201ENST00000011691 ZNF526Q8TF50 670 aaPredicted RBP21.01■□□□□ 0.95
SS18L2-201ENST00000011691 CCDC87Q9NVE4 849 aa21.01■□□□□ 0.95
SS18L2-201ENST00000011691 USP42Q9H9J4 1324 aaKnown RBP21■□□□□ 0.95
SS18L2-201ENST00000011691 FKBP8Q14318 412 aa20.99■□□□□ 0.95
SS18L2-201ENST00000011691 AFDNP55196 1824 aaKnown RBP20.99■□□□□ 0.95
SS18L2-201ENST00000011691 BCS1LQ9Y276 419 aa20.98■□□□□ 0.95
SS18L2-201ENST00000011691 ADCY9O60503 1353 aa20.97■□□□□ 0.95
SS18L2-201ENST00000011691 DPEP1P16444 411 aa20.97■□□□□ 0.95
SS18L2-201ENST00000011691 TGFB2P61812 414 aa20.97■□□□□ 0.95
SS18L2-201ENST00000011691 ARFGEF1Q9Y6D6 1849 aa20.97■□□□□ 0.95
SS18L2-201ENST00000011691 CYP19A1P11511 503 aaPredicted RBP20.96■□□□□ 0.95
SS18L2-201ENST00000011691 DDR1Q08345 913 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms