RNA–Protein interactions for RNA: ENST00000011473.6

SYPL1-201, Transcript of synaptophysin like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYPL1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-201ENST00000011473 CCER2I3L3R5 266 aa15.89■□□□□ 0.13
SYPL1-201ENST00000011473 ATG3Q9NT62 314 aa15.89■□□□□ 0.13
SYPL1-201ENST00000011473 CEMIPQ8WUJ3 1361 aa15.88■□□□□ 0.13
SYPL1-201ENST00000011473 PALLDQ8WX93 1383 aa15.88■□□□□ 0.13
SYPL1-201ENST00000011473 TEFQ10587 303 aa15.88■□□□□ 0.13
SYPL1-201ENST00000011473 SLC39A6Q13433 755 aa15.88■□□□□ 0.13
SYPL1-201ENST00000011473 TXNRD1Q16881 649 aa15.88■□□□□ 0.13
SYPL1-201ENST00000011473 SRCAPQ6ZRS2 3230 aa15.88■□□□□ 0.13
SYPL1-201ENST00000011473 ITGB4P16144 1822 aa15.88■□□□□ 0.13
SYPL1-201ENST00000011473 LRRC4BQ9NT99 713 aa15.88■□□□□ 0.13
SYPL1-201ENST00000011473 SALL2Q9Y467 1007 aaPredicted RBP15.87■□□□□ 0.13
SYPL1-201ENST00000011473 SCN11AQ9UI33 1791 aa15.87■□□□□ 0.13
SYPL1-201ENST00000011473 ADAMTS7Q9UKP4 1686 aa15.86■□□□□ 0.13
SYPL1-201ENST00000011473 MRC1P22897 1456 aa15.86■□□□□ 0.13
SYPL1-201ENST00000011473 PTCD1O75127 700 aaKnown RBP15.86■□□□□ 0.13
SYPL1-201ENST00000011473 MIS18AQ9NYP9 233 aa15.86■□□□□ 0.13
SYPL1-201ENST00000011473 TRIM35Q9UPQ4 493 aa15.86■□□□□ 0.13
SYPL1-201ENST00000011473 HTATSF1O43719 755 aaKnown RBP15.85■□□□□ 0.13
SYPL1-201ENST00000011473 CCNL1Q9UK58 526 aaPredicted RBP15.85■□□□□ 0.13
SYPL1-201ENST00000011473 RBM42Q9BTD8 480 aaKnown RBP15.84■□□□□ 0.13
SYPL1-201ENST00000011473 DLG5Q8TDM6 1919 aa15.84■□□□□ 0.13
SYPL1-201ENST00000011473 BTBD11A6QL63 1104 aa15.83■□□□□ 0.13
SYPL1-201ENST00000011473 KCNQ3O43525 872 aa15.83■□□□□ 0.13
SYPL1-201ENST00000011473 SLC4A9Q96Q91 983 aa15.83■□□□□ 0.13
SYPL1-201ENST00000011473 LOC102724428A0A0B4J2F2 783 aa15.83■□□□□ 0.12
SYPL1-201ENST00000011473 SIK1P57059 783 aa15.83■□□□□ 0.12
SYPL1-201ENST00000011473 SMARCC1Q92922 1105 aaPredicted RBP15.83■□□□□ 0.12
SYPL1-201ENST00000011473 ANO8Q9HCE9 1232 aaPredicted RBP15.82■□□□□ 0.12
SYPL1-201ENST00000011473 VIRMAQ69YN4 1812 aaKnown RBP15.81■□□□□ 0.12
SYPL1-201ENST00000011473 ATP6V1AP38606 617 aa15.81■□□□□ 0.12
SYPL1-201ENST00000011473 LMOD3Q0VAK6 560 aa15.81■□□□□ 0.12
SYPL1-201ENST00000011473 ZNF790Q6PG37 636 aa15.81■□□□□ 0.12
SYPL1-201ENST00000011473 ITPK1Q13572 414 aa15.8■□□□□ 0.12
SYPL1-201ENST00000011473 TAF7Q15545 349 aaPredicted RBP15.8■□□□□ 0.12
SYPL1-201ENST00000011473 SLC27A3Q5K4L6 730 aa15.8■□□□□ 0.12
SYPL1-201ENST00000011473 TTC5Q8N0Z6 440 aa15.8■□□□□ 0.12
SYPL1-201ENST00000011473 LAS1LQ9Y4W2 734 aaKnown RBP15.8■□□□□ 0.12
SYPL1-201ENST00000011473 RGPD3A6NKT7 1758 aaPredicted RBP15.8■□□□□ 0.12
SYPL1-201ENST00000011473 RGPD4Q7Z3J3 1758 aa15.8■□□□□ 0.12
SYPL1-201ENST00000011473 RREB1Q92766 1687 aa15.79■□□□□ 0.12
SYPL1-201ENST00000011473 PSDA5PKW4 1024 aaPredicted RBP15.79■□□□□ 0.12
SYPL1-201ENST00000011473 ZNF496Q96IT1 587 aaPredicted RBP15.79■□□□□ 0.12
SYPL1-201ENST00000011473 LY75O60449 1722 aa15.79■□□□□ 0.12
SYPL1-201ENST00000011473 ZNF827Q17R98 1081 aa15.79■□□□□ 0.12
SYPL1-201ENST00000011473 NUP188Q5SRE5 1749 aa15.78■□□□□ 0.12
SYPL1-201ENST00000011473 R3HDM1Q15032 1099 aaKnown RBP15.78■□□□□ 0.12
SYPL1-201ENST00000011473 SIPA1L3O60292 1781 aaPredicted RBP15.78■□□□□ 0.12
SYPL1-201ENST00000011473 KCPQ6ZWJ8 1503 aa15.78■□□□□ 0.12
SYPL1-201ENST00000011473 WWC1Q8IX03 1113 aa15.77■□□□□ 0.12
SYPL1-201ENST00000011473 LINC00116Q8NCU8 138 aa15.77■□□□□ 0.12
SYPL1-201ENST00000011473 SMIM5Q71RC9 77 aa15.77■□□□□ 0.11
SYPL1-201ENST00000011473 TSPYL4Q9UJ04 414 aa15.77■□□□□ 0.11
SYPL1-201ENST00000011473 PAPPAQ13219 1627 aa15.77■□□□□ 0.11
SYPL1-201ENST00000011473 PRAMEF22A3QJZ6 481 aa15.76■□□□□ 0.11
SYPL1-201ENST00000011473 NBPF14Q5TI25 921 aa15.76■□□□□ 0.11
SYPL1-201ENST00000011473 DNAJC10Q8IXB1 793 aa15.76■□□□□ 0.11
SYPL1-201ENST00000011473 PDGFDQ9GZP0 370 aaPredicted RBP15.75■□□□□ 0.11
SYPL1-201ENST00000011473 SLC15A2Q16348 729 aa15.74■□□□□ 0.11
SYPL1-201ENST00000011473 AMIGO3Q86WK7 504 aa15.74■□□□□ 0.11
SYPL1-201ENST00000011473 FMNL2Q96PY5 1086 aa15.74■□□□□ 0.11
SYPL1-201ENST00000011473 CCDC27Q2M243 656 aa15.74■□□□□ 0.11
SYPL1-201ENST00000011473 AKT1S1Q96B36 256 aa15.74■□□□□ 0.11
SYPL1-201ENST00000011473 STK32BQ9NY57 414 aa15.74■□□□□ 0.11
SYPL1-201ENST00000011473 HEG1Q9ULI3 1381 aa15.73■□□□□ 0.11
SYPL1-201ENST00000011473 KRT24Q2M2I5 525 aa15.73■□□□□ 0.11
SYPL1-201ENST00000011473 TFCP2L1Q9NZI6 479 aa15.73■□□□□ 0.11
SYPL1-201ENST00000011473 C5P01031 1676 aa15.72■□□□□ 0.11
SYPL1-201ENST00000011473 CHL1O00533 1208 aa15.72■□□□□ 0.11
SYPL1-201ENST00000011473 EIF4A1P60842 406 aaKnown RBP15.72■□□□□ 0.11
SYPL1-201ENST00000011473 CFAP44Q96MT7 982 aa15.72■□□□□ 0.11
SYPL1-201ENST00000011473 MBIPQ9NS73 344 aa15.72■□□□□ 0.11
SYPL1-201ENST00000011473 UBR2Q8IWV8 1755 aa15.72■□□□□ 0.11
SYPL1-201ENST00000011473 PHF14O94880 888 aa15.71■□□□□ 0.11
SYPL1-201ENST00000011473 TSR2Q969E8 191 aaKnown RBP15.71■□□□□ 0.11
SYPL1-201ENST00000011473 AK7Q96M32 723 aa15.71■□□□□ 0.11
SYPL1-201ENST00000011473 GNPATO15228 680 aa15.71■□□□□ 0.11
SYPL1-201ENST00000011473 CRKLP46109 303 aaKnown RBP15.71■□□□□ 0.11
SYPL1-201ENST00000011473 VSIG10Q8N0Z9 540 aa15.71■□□□□ 0.11
SYPL1-201ENST00000011473 SPINK5Q9NQ38 1064 aaPredicted RBP15.71■□□□□ 0.11
SYPL1-201ENST00000011473 USP16Q9Y5T5 823 aa15.71■□□□□ 0.11
SYPL1-201ENST00000011473 C4BP0C0L5 1744 aa15.7■□□□□ 0.1
SYPL1-201ENST00000011473 ZNF853P0CG23 659 aa15.7■□□□□ 0.1
SYPL1-201ENST00000011473 CYP19A1P11511 503 aaPredicted RBP15.7■□□□□ 0.1
SYPL1-201ENST00000011473 PIP4K2AP48426 406 aaPredicted RBP15.7■□□□□ 0.1
SYPL1-201ENST00000011473 IFT57Q9NWB7 429 aa15.7■□□□□ 0.1
SYPL1-201ENST00000011473 TJP1Q07157 1748 aa15.7■□□□□ 0.1
SYPL1-201ENST00000011473 CALD1Q05682 793 aaKnown RBP15.7■□□□□ 0.1
SYPL1-201ENST00000011473 KDM3BQ7LBC6 1761 aa15.69■□□□□ 0.1
SYPL1-201ENST00000011473 SNRPA1P09661 255 aaKnown RBP15.69■□□□□ 0.1
SYPL1-201ENST00000011473 PNPLA7Q6ZV29 1317 aa15.69■□□□□ 0.1
SYPL1-201ENST00000011473 TAF1LQ8IZX4 1826 aa15.69■□□□□ 0.1
SYPL1-201ENST00000011473 GIGYF1O75420 1035 aaPredicted RBP15.68■□□□□ 0.1
SYPL1-201ENST00000011473 GNAI1P63096 354 aa15.68■□□□□ 0.1
SYPL1-201ENST00000011473 INTS5Q6P9B9 1019 aaKnown RBP15.68■□□□□ 0.1
SYPL1-201ENST00000011473 ZBTB1Q9Y2K1 713 aa15.68■□□□□ 0.1
SYPL1-201ENST00000011473 A1BGP04217 495 aa15.68■□□□□ 0.1
SYPL1-201ENST00000011473 HNRNPUQ00839 825 aaKnown RBP eCLIP15.68■□□□□ 0.1
SYPL1-201ENST00000011473 BABAM1Q9NWV8 329 aa15.68■□□□□ 0.1
SYPL1-201ENST00000011473 ZNF521Q96K83 1311 aa15.68■□□□□ 0.1
SYPL1-201ENST00000011473 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms