RNA–Protein interactions for RNA: ENST00000007390.2

TSR3-201, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR3, Length 1,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-201ENST00000007390 LINC00116Q8NCU8 138 aa33.51■■■□□ 2.95
TSR3-201ENST00000007390 AK7Q96M32 723 aa33.51■■■□□ 2.95
TSR3-201ENST00000007390 SCN11AQ9UI33 1791 aa33.51■■■□□ 2.95
TSR3-201ENST00000007390 ITPK1Q13572 414 aa33.5■■■□□ 2.95
TSR3-201ENST00000007390 MTHFSDQ2M296 383 aaKnown RBP33.5■■■□□ 2.95
TSR3-201ENST00000007390 ARXQ96QS3 562 aa33.5■■■□□ 2.95
TSR3-201ENST00000007390 ATP6V1AP38606 617 aa33.49■■■□□ 2.95
TSR3-201ENST00000007390 NFATC2IPQ8NCF5 419 aa33.48■■■□□ 2.95
TSR3-201ENST00000007390 FHDC1Q9C0D6 1143 aaPredicted RBP33.47■■■□□ 2.95
TSR3-201ENST00000007390 MRC1P22897 1456 aa33.47■■■□□ 2.95
TSR3-201ENST00000007390 MAP3K5Q99683 1374 aa33.47■■■□□ 2.95
TSR3-201ENST00000007390 UBR3Q6ZT12 1888 aa33.46■■■□□ 2.95
TSR3-201ENST00000007390 ADAMTS7Q9UKP4 1686 aa33.46■■■□□ 2.95
TSR3-201ENST00000007390 MSH5O43196 834 aa33.46■■■□□ 2.95
TSR3-201ENST00000007390 POLD1P28340 1107 aa33.46■■■□□ 2.95
TSR3-201ENST00000007390 SLC4A9Q96Q91 983 aa33.46■■■□□ 2.95
TSR3-201ENST00000007390 NUDCQ9Y266 331 aa33.45■■■□□ 2.95
TSR3-201ENST00000007390 AMIGO3Q86WK7 504 aa33.44■■■□□ 2.94
TSR3-201ENST00000007390 SLC52A2Q9HAB3 445 aa33.44■■■□□ 2.94
TSR3-201ENST00000007390 RNMTO43148 476 aaKnown RBP33.43■■■□□ 2.94
TSR3-201ENST00000007390 SSFA2P28290 1259 aa33.43■■■□□ 2.94
TSR3-201ENST00000007390 SYT17Q9BSW7 474 aa33.43■■■□□ 2.94
TSR3-201ENST00000007390 RBM42Q9BTD8 480 aaKnown RBP33.43■■■□□ 2.94
TSR3-201ENST00000007390 LGR6Q9HBX8 967 aa33.43■■■□□ 2.94
TSR3-201ENST00000007390 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP33.41■■■□□ 2.94
TSR3-201ENST00000007390 GAS2L2Q8NHY3 880 aa33.41■■■□□ 2.94
TSR3-201ENST00000007390 RSPH6AQ9H0K4 717 aa33.4■■■□□ 2.94
TSR3-201ENST00000007390 GNPATO15228 680 aa33.38■■■□□ 2.93
TSR3-201ENST00000007390 COL5A3P25940 1745 aaPredicted RBP33.38■■■□□ 2.93
TSR3-201ENST00000007390 CICQ96RK0 1608 aaPredicted RBP33.38■■■□□ 2.93
TSR3-201ENST00000007390 PHF14O94880 888 aa33.37■■■□□ 2.93
TSR3-201ENST00000007390 RC3H1Q5TC82 1133 aaKnown RBP33.37■■■□□ 2.93
TSR3-201ENST00000007390 CNTNAP4Q9C0A0 1308 aa33.36■■■□□ 2.93
TSR3-201ENST00000007390 PTCD1O75127 700 aaKnown RBP33.36■■■□□ 2.93
TSR3-201ENST00000007390 PRKAR2BP31323 418 aa33.36■■■□□ 2.93
TSR3-201ENST00000007390 VIRMAQ69YN4 1812 aaKnown RBP33.35■■■□□ 2.93
TSR3-201ENST00000007390 U2AF1L5P0DN76 240 aaPredicted RBP33.35■■■□□ 2.93
TSR3-201ENST00000007390 U2AF1Q01081 240 aaKnown RBP eCLIP33.35■■■□□ 2.93
TSR3-201ENST00000007390 DCAF8L1A6NGE4 600 aa33.34■■■□□ 2.93
TSR3-201ENST00000007390 GNAT3A8MTJ3 354 aa33.34■■■□□ 2.93
TSR3-201ENST00000007390 MSL1Q68DK7 614 aa33.34■■■□□ 2.93
TSR3-201ENST00000007390 FCHSD2O94868 740 aa33.33■■■□□ 2.93
TSR3-201ENST00000007390 SMIM5Q71RC9 77 aa33.33■■■□□ 2.93
TSR3-201ENST00000007390 PHACTR3Q96KR7 559 aa33.33■■■□□ 2.93
TSR3-201ENST00000007390 RTCBQ9Y3I0 505 aaKnown RBP33.31■■■□□ 2.92
TSR3-201ENST00000007390 TJP1Q07157 1748 aa33.3■■■□□ 2.92
TSR3-201ENST00000007390 ADRA2BP18089 450 aa33.29■■■□□ 2.92
TSR3-201ENST00000007390 DDX10Q13206 875 aaKnown RBP33.29■■■□□ 2.92
TSR3-201ENST00000007390 IL17REQ8NFR9 667 aa33.29■■■□□ 2.92
TSR3-201ENST00000007390 KCPQ6ZWJ8 1503 aa33.28■■■□□ 2.92
TSR3-201ENST00000007390 RALBP1Q15311 655 aa33.28■■■□□ 2.92
TSR3-201ENST00000007390 CEMIPQ8WUJ3 1361 aa33.27■■■□□ 2.92
TSR3-201ENST00000007390 RPS6KA4O75676 772 aa33.27■■■□□ 2.92
TSR3-201ENST00000007390 SLC39A6Q13433 755 aa33.26■■■□□ 2.91
TSR3-201ENST00000007390 TRAPPC3LQ5T215 181 aa33.26■■■□□ 2.91
TSR3-201ENST00000007390 MYH14Q7Z406 1995 aaKnown RBP33.25■■■□□ 2.91
TSR3-201ENST00000007390 CRKLP46109 303 aaKnown RBP33.25■■■□□ 2.91
TSR3-201ENST00000007390 TEFQ10587 303 aa33.25■■■□□ 2.91
TSR3-201ENST00000007390 KLHL34Q8N239 644 aa33.24■■■□□ 2.91
TSR3-201ENST00000007390 UBR2Q8IWV8 1755 aa33.23■■■□□ 2.91
TSR3-201ENST00000007390 SIPA1L3O60292 1781 aaPredicted RBP33.22■■■□□ 2.91
TSR3-201ENST00000007390 ZEB1P37275 1124 aaPredicted RBP33.22■■■□□ 2.91
TSR3-201ENST00000007390 VSIG10Q8N0Z9 540 aa33.22■■■□□ 2.91
TSR3-201ENST00000007390 DNAJC10Q8IXB1 793 aa33.21■■■□□ 2.91
TSR3-201ENST00000007390 ARHGEF1Q92888 912 aaKnown RBP33.21■■■□□ 2.91
TSR3-201ENST00000007390 INTS5Q6P9B9 1019 aaKnown RBP33.19■■■□□ 2.9
TSR3-201ENST00000007390 CD2APQ9Y5K6 639 aa33.19■■■□□ 2.9
TSR3-201ENST00000007390 TTC5Q8N0Z6 440 aa33.18■■■□□ 2.9
TSR3-201ENST00000007390 NLGN2Q8NFZ4 835 aa33.18■■■□□ 2.9
TSR3-201ENST00000007390 CYP19A1P11511 503 aaPredicted RBP33.17■■■□□ 2.9
TSR3-201ENST00000007390 RFC4P35249 363 aa33.17■■■□□ 2.9
TSR3-201ENST00000007390 CCDC87Q9NVE4 849 aa33.17■■■□□ 2.9
TSR3-201ENST00000007390 UTRNP46939 3433 aa33.17■■■□□ 2.9
TSR3-201ENST00000007390 ZNF790Q6PG37 636 aa33.16■■■□□ 2.9
TSR3-201ENST00000007390 C4AP0C0L4 1744 aa33.16■■■□□ 2.9
TSR3-201ENST00000007390 HTATSF1O43719 755 aaKnown RBP33.15■■■□□ 2.9
TSR3-201ENST00000007390 NLGN1Q8N2Q7 840 aa33.15■■■□□ 2.9
TSR3-201ENST00000007390 RTF1Q92541 710 aaKnown RBP33.14■■■□□ 2.9
TSR3-201ENST00000007390 MYBBP1AQ9BQG0 1328 aaKnown RBP33.13■■■□□ 2.89
TSR3-201ENST00000007390 GYS1P13807 737 aa33.13■■■□□ 2.89
TSR3-201ENST00000007390 NEFMP07197 916 aa33.12■■■□□ 2.89
TSR3-201ENST00000007390 MMP10P09238 476 aa33.12■■■□□ 2.89
TSR3-201ENST00000007390 ZNF496Q96IT1 587 aaPredicted RBP33.12■■■□□ 2.89
TSR3-201ENST00000007390 PLEKHF1Q96S99 279 aa33.12■■■□□ 2.89
TSR3-201ENST00000007390 GOLGB1Q14789 3259 aaKnown RBP33.12■■■□□ 2.89
TSR3-201ENST00000007390 HEG1Q9ULI3 1381 aa33.11■■■□□ 2.89
TSR3-201ENST00000007390 SOS1Q07889 1333 aaPredicted RBP33.11■■■□□ 2.89
TSR3-201ENST00000007390 USP42Q9H9J4 1324 aaKnown RBP33.1■■■□□ 2.89
TSR3-201ENST00000007390 MCM10Q7L590 875 aa33.1■■■□□ 2.89
TSR3-201ENST00000007390 PNNQ9H307 717 aaKnown RBP33.09■■■□□ 2.89
TSR3-201ENST00000007390 BTBD11A6QL63 1104 aa33.08■■■□□ 2.89
TSR3-201ENST00000007390 YY1P25490 414 aa33.08■■■□□ 2.89
TSR3-201ENST00000007390 GPR162Q16538 588 aa33.08■■■□□ 2.89
TSR3-201ENST00000007390 STARD3NLO95772 234 aa33.07■■■□□ 2.88
TSR3-201ENST00000007390 FMNL2Q96PY5 1086 aa33.07■■■□□ 2.88
TSR3-201ENST00000007390 TEX13AQ9BXU3 409 aaPredicted RBP33.07■■■□□ 2.88
TSR3-201ENST00000007390 ZBTB1Q9Y2K1 713 aa33.07■■■□□ 2.88
TSR3-201ENST00000007390 SRP68Q9UHB9 627 aaKnown RBP33.05■■■□□ 2.88
TSR3-201ENST00000007390 DCTN1Q14203 1278 aa33.04■■■□□ 2.88
TSR3-201ENST00000007390 NFE2L2Q16236 605 aa33.04■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms