RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 PREX1Q8TCU6 1659 aa12.8□□□□□ -0.36
CX3CL1-201ENST00000006053 NEO1Q92859 1461 aa12.8□□□□□ -0.36
CX3CL1-201ENST00000006053 HS1BP3Q53T59 392 aa12.8□□□□□ -0.36
CX3CL1-201ENST00000006053 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.8□□□□□ -0.36
CX3CL1-201ENST00000006053 PTMAP06454 111 aaKnown RBP12.79□□□□□ -0.36
CX3CL1-201ENST00000006053 HSP90AB2PQ58FF8 381 aa12.79□□□□□ -0.36
CX3CL1-201ENST00000006053 NECTIN2Q92692 538 aa12.79□□□□□ -0.36
CX3CL1-201ENST00000006053 GDPD2Q9HCC8 539 aa12.79□□□□□ -0.36
CX3CL1-201ENST00000006053 TSPYL4Q9UJ04 414 aa12.79□□□□□ -0.36
CX3CL1-201ENST00000006053 PALD1Q9ULE6 856 aa12.79□□□□□ -0.36
CX3CL1-201ENST00000006053 CPS1P31327 1500 aa12.79□□□□□ -0.36
CX3CL1-201ENST00000006053 FOXO3O43524 673 aa12.79□□□□□ -0.36
CX3CL1-201ENST00000006053 MCCP23508 829 aa12.79□□□□□ -0.36
CX3CL1-201ENST00000006053 UPF3BQ9BZI7 483 aaKnown RBP12.78□□□□□ -0.36
CX3CL1-201ENST00000006053 ZKSCAN5Q9Y2L8 839 aa12.78□□□□□ -0.36
CX3CL1-201ENST00000006053 MBD3O95983 291 aa12.78□□□□□ -0.36
CX3CL1-201ENST00000006053 MPNDQ8N594 471 aa12.78□□□□□ -0.36
CX3CL1-201ENST00000006053 ESYT1Q9BSJ8 1104 aa12.78□□□□□ -0.36
CX3CL1-201ENST00000006053 RIMBP3CA6NJZ7 1639 aa12.78□□□□□ -0.36
CX3CL1-201ENST00000006053 RIMBP3BA6NNM3 1639 aa12.78□□□□□ -0.36
CX3CL1-201ENST00000006053 RIMBP3Q9UFD9 1639 aa12.78□□□□□ -0.36
CX3CL1-201ENST00000006053 GNAI2P04899 355 aa12.78□□□□□ -0.36
CX3CL1-201ENST00000006053 RTF1Q92541 710 aaKnown RBP12.78□□□□□ -0.36
CX3CL1-201ENST00000006053 ZNF500O60304 480 aaPredicted RBP12.77□□□□□ -0.36
CX3CL1-201ENST00000006053 PRDM10Q9NQV6 1147 aa12.77□□□□□ -0.36
CX3CL1-201ENST00000006053 UQCRHLA0A096LP55 91 aa12.77□□□□□ -0.37
CX3CL1-201ENST00000006053 UQCRHP07919 91 aa12.77□□□□□ -0.37
CX3CL1-201ENST00000006053 GTF2E1P29083 439 aaPredicted RBP12.77□□□□□ -0.37
CX3CL1-201ENST00000006053 BRD1O95696 1058 aa12.77□□□□□ -0.37
CX3CL1-201ENST00000006053 CCT4P50991 539 aaKnown RBP12.77□□□□□ -0.37
CX3CL1-201ENST00000006053 LRRCC1Q9C099 1032 aa12.77□□□□□ -0.37
CX3CL1-201ENST00000006053 OSBPL3Q9H4L5 887 aa12.77□□□□□ -0.37
CX3CL1-201ENST00000006053 CCDC39Q9UFE4 941 aa12.77□□□□□ -0.37
CX3CL1-201ENST00000006053 KIAA0232Q92628 1395 aa12.77□□□□□ -0.37
CX3CL1-201ENST00000006053 MX1P20591 662 aa12.76□□□□□ -0.37
CX3CL1-201ENST00000006053 METP08581 1390 aa12.76□□□□□ -0.37
CX3CL1-201ENST00000006053 MCM2P49736 904 aa12.76□□□□□ -0.37
CX3CL1-201ENST00000006053 TSPY26PQ9H489 355 aa12.76□□□□□ -0.37
CX3CL1-201ENST00000006053 FKBP5Q13451 457 aaPredicted RBP12.75□□□□□ -0.37
CX3CL1-201ENST00000006053 STK31Q9BXU1 1019 aa12.75□□□□□ -0.37
CX3CL1-201ENST00000006053 PNMA6EA0A0J9YXQ4 647 aa12.75□□□□□ -0.37
CX3CL1-201ENST00000006053 GADD45BO75293 160 aaPredicted RBP12.75□□□□□ -0.37
CX3CL1-201ENST00000006053 CHMLP26374 656 aa12.75□□□□□ -0.37
CX3CL1-201ENST00000006053 PRR36Q9H6K5 1346 aa12.74□□□□□ -0.37
CX3CL1-201ENST00000006053 MTHFSDQ2M296 383 aaKnown RBP12.74□□□□□ -0.37
CX3CL1-201ENST00000006053 UNC5CLQ8IV45 518 aa12.74□□□□□ -0.37
CX3CL1-201ENST00000006053 SYAP1Q96A49 352 aaPredicted RBP12.74□□□□□ -0.37
CX3CL1-201ENST00000006053 CHMP4AQ9BY43 222 aa12.74□□□□□ -0.37
CX3CL1-201ENST00000006053 IL1RAPL2Q9NP60 686 aa12.74□□□□□ -0.37
CX3CL1-201ENST00000006053 TTC21BQ7Z4L5 1316 aa12.74□□□□□ -0.37
CX3CL1-201ENST00000006053 DLC1Q96QB1 1528 aa12.74□□□□□ -0.37
CX3CL1-201ENST00000006053 MAP4K4O95819 1239 aaPredicted RBP12.73□□□□□ -0.37
CX3CL1-201ENST00000006053 CUL4AQ13619 759 aa12.73□□□□□ -0.37
CX3CL1-201ENST00000006053 A2ML1A8K2U0 1454 aa12.73□□□□□ -0.37
CX3CL1-201ENST00000006053 TERF1P54274 439 aa12.73□□□□□ -0.37
CX3CL1-201ENST00000006053 CSPP1Q1MSJ5 1256 aa12.73□□□□□ -0.37
CX3CL1-201ENST00000006053 DNTTIP2Q5QJE6 756 aaKnown RBP12.73□□□□□ -0.37
CX3CL1-201ENST00000006053 RBM33Q96EV2 1170 aaKnown RBP12.73□□□□□ -0.37
CX3CL1-201ENST00000006053 USP48Q86UV5 1035 aa12.72□□□□□ -0.37
CX3CL1-201ENST00000006053 LARP6Q9BRS8 491 aaKnown RBP12.72□□□□□ -0.37
CX3CL1-201ENST00000006053 PLCD3Q8N3E9 789 aa12.72□□□□□ -0.37
CX3CL1-201ENST00000006053 LRRFIP2Q9Y608 721 aaKnown RBP12.72□□□□□ -0.37
CX3CL1-201ENST00000006053 ACEP12821 1306 aa12.72□□□□□ -0.37
CX3CL1-201ENST00000006053 GNAI3P08754 354 aa12.72□□□□□ -0.37
CX3CL1-201ENST00000006053 FLIIQ13045 1269 aa12.72□□□□□ -0.37
CX3CL1-201ENST00000006053 NUTM1Q86Y26 1132 aa12.72□□□□□ -0.37
CX3CL1-201ENST00000006053 SLC26A8Q96RN1 970 aa12.72□□□□□ -0.37
CX3CL1-201ENST00000006053 MAP3K19Q56UN5 1328 aa12.72□□□□□ -0.37
CX3CL1-201ENST00000006053 CRB1P82279 1406 aa12.72□□□□□ -0.37
CX3CL1-201ENST00000006053 MCM5P33992 734 aa12.71□□□□□ -0.37
CX3CL1-201ENST00000006053 INTS4Q96HW7 963 aaKnown RBP12.71□□□□□ -0.37
CX3CL1-201ENST00000006053 ANAPC15P60006 121 aa12.71□□□□□ -0.38
CX3CL1-201ENST00000006053 ATP8B2P98198 1209 aa12.71□□□□□ -0.38
CX3CL1-201ENST00000006053 ZNF830Q96NB3 372 aaPredicted RBP12.71□□□□□ -0.38
CX3CL1-201ENST00000006053 IL25Q9H293 177 aa12.71□□□□□ -0.38
CX3CL1-201ENST00000006053 RICTORQ6R327 1708 aa12.71□□□□□ -0.38
CX3CL1-201ENST00000006053 SALL3Q9BXA9 1300 aa12.7□□□□□ -0.38
CX3CL1-201ENST00000006053 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.7□□□□□ -0.38
CX3CL1-201ENST00000006053 WDR33Q9C0J8 1336 aaKnown RBP12.7□□□□□ -0.38
CX3CL1-201ENST00000006053 PHF14O94880 888 aa12.7□□□□□ -0.38
CX3CL1-201ENST00000006053 PLCB2Q00722 1185 aa12.7□□□□□ -0.38
CX3CL1-201ENST00000006053 DTNBO60941 627 aa12.69□□□□□ -0.38
CX3CL1-201ENST00000006053 KIAA2012Q0VF49 1180 aa12.69□□□□□ -0.38
CX3CL1-201ENST00000006053 USP25Q9UHP3 1055 aa12.69□□□□□ -0.38
CX3CL1-201ENST00000006053 SASS6Q6UVJ0 657 aa12.69□□□□□ -0.38
CX3CL1-201ENST00000006053 CCDC30Q5VVM6 783 aa12.68□□□□□ -0.38
CX3CL1-201ENST00000006053 CNPY2Q9Y2B0 182 aa12.68□□□□□ -0.38
CX3CL1-201ENST00000006053 VGLL3A8MV65 326 aa12.68□□□□□ -0.38
CX3CL1-201ENST00000006053 AMPHP49418 695 aa12.68□□□□□ -0.38
CX3CL1-201ENST00000006053 SRCIN1Q9C0H9 1055 aa12.68□□□□□ -0.38
CX3CL1-201ENST00000006053 SURF6O75683 361 aaKnown RBP12.68□□□□□ -0.38
CX3CL1-201ENST00000006053 UBTFL1P0CB47 393 aaPredicted RBP12.68□□□□□ -0.38
CX3CL1-201ENST00000006053 MAP7D2Q96T17 732 aa12.67□□□□□ -0.38
CX3CL1-201ENST00000006053 DYNC1I1O14576 645 aa12.67□□□□□ -0.38
CX3CL1-201ENST00000006053 FIBPO43427 364 aa12.67□□□□□ -0.38
CX3CL1-201ENST00000006053 HCLS1P14317 486 aaPredicted RBP12.67□□□□□ -0.38
CX3CL1-201ENST00000006053 STAP2Q9UGK3 403 aa12.67□□□□□ -0.38
CX3CL1-201ENST00000006053 C17orf53Q8N3J3 647 aaPredicted RBP12.66□□□□□ -0.38
CX3CL1-201ENST00000006053 EYA1Q99502 592 aa12.66□□□□□ -0.38
CX3CL1-201ENST00000006053 TTC12Q9H892 705 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms