RNA–Protein interactions for RNA: ENSMUST00000210774.1

Ebf3-208, Transcript of Transcription factor COE3, mousemouse

TSL 1 (best) BASIC

Gene Ebf3, Length 2,994 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-208ENSMUST00000210774 Yeats2Q3TUF7 1407 aa17.72■□□□□ 0.43
Ebf3-208ENSMUST00000210774 RdxP26043 583 aaKnown RBP17.72■□□□□ 0.43
Ebf3-208ENSMUST00000210774 Ap5z1Q3U829 807 aa17.72■□□□□ 0.43
Ebf3-208ENSMUST00000210774 Ano6Q6P9J9 911 aa17.72■□□□□ 0.43
Ebf3-208ENSMUST00000210774 Igsf3Q6ZQA6 1194 aa17.72■□□□□ 0.43
Ebf3-208ENSMUST00000210774 Shq1Q7TMX5 569 aa17.72■□□□□ 0.43
Ebf3-208ENSMUST00000210774 Rtel1Q0VGM9 1203 aa17.71■□□□□ 0.43
Ebf3-208ENSMUST00000210774 Cep152A2AUM9 1736 aaKnown RBP17.71■□□□□ 0.43
Ebf3-208ENSMUST00000210774 St18Q80TY4 1045 aa17.71■□□□□ 0.43
Ebf3-208ENSMUST00000210774 Ccdc96Q9CR92 584 aa17.71■□□□□ 0.43
Ebf3-208ENSMUST00000210774 Fmnl2A2APV2 1086 aa17.7■□□□□ 0.42
Ebf3-208ENSMUST00000210774 Vwa3bJ9JI28 736 aa17.7■□□□□ 0.42
Ebf3-208ENSMUST00000210774 Prune1Q8BIW1 454 aa17.7■□□□□ 0.42
Ebf3-208ENSMUST00000210774 Q9D9H8 365 aa17.7■□□□□ 0.42
Ebf3-208ENSMUST00000210774 Plxnc1Q9QZC2 1574 aa17.7■□□□□ 0.42
Ebf3-208ENSMUST00000210774 Exosc9Q9JHI7 438 aaKnown RBP17.7■□□□□ 0.42
Ebf3-208ENSMUST00000210774 Nphp4P59240 1425 aa17.7■□□□□ 0.42
Ebf3-208ENSMUST00000210774 Mum1Q6DID5 682 aa17.7■□□□□ 0.42
Ebf3-208ENSMUST00000210774 Phf20l1Q8CCJ9 1013 aa17.7■□□□□ 0.42
Ebf3-208ENSMUST00000210774 Syt10Q9R0N4 523 aa17.7■□□□□ 0.42
Ebf3-208ENSMUST00000210774 Mtx1P47802 317 aa17.69■□□□□ 0.42
Ebf3-208ENSMUST00000210774 Fez2Q6TYB5 348 aa17.69■□□□□ 0.42
Ebf3-208ENSMUST00000210774 Cchcr1Q8K2I2 770 aa17.69■□□□□ 0.42
Ebf3-208ENSMUST00000210774 Aldh1l1Q8R0Y6 902 aa17.69■□□□□ 0.42
Ebf3-208ENSMUST00000210774 Znf771Q8BJ90 317 aa17.69■□□□□ 0.42
Ebf3-208ENSMUST00000210774 Ift57Q8BXG3 429 aa17.69■□□□□ 0.42
Ebf3-208ENSMUST00000210774 Sf3a1Q8K4Z5 791 aaKnown RBP17.68■□□□□ 0.42
Ebf3-208ENSMUST00000210774 Kansl3A2RSY1 903 aaKnown RBP17.68■□□□□ 0.42
Ebf3-208ENSMUST00000210774 Arid4aF8VPQ2 1261 aaKnown RBP17.68■□□□□ 0.42
Ebf3-208ENSMUST00000210774 EvcP57680 1005 aa17.68■□□□□ 0.42
Ebf3-208ENSMUST00000210774 TfrcQ62351 763 aaKnown RBP17.68■□□□□ 0.42
Ebf3-208ENSMUST00000210774 Myo3aQ8K3H5 1613 aa17.68■□□□□ 0.42
Ebf3-208ENSMUST00000210774 Ankrd50F7BE84 1390 aa17.68■□□□□ 0.42
Ebf3-208ENSMUST00000210774 Ankrd44B2RXR6 993 aa17.67■□□□□ 0.42
Ebf3-208ENSMUST00000210774 Med14A2ABV5 1459 aaKnown RBP17.67■□□□□ 0.42
Ebf3-208ENSMUST00000210774 Nsd3Q6P2L6 1439 aa17.66■□□□□ 0.42
Ebf3-208ENSMUST00000210774 Zscan29E9Q5B4 869 aa17.66■□□□□ 0.42
Ebf3-208ENSMUST00000210774 Asxl2Q8BZ32 1370 aa17.66■□□□□ 0.42
Ebf3-208ENSMUST00000210774 Ulbp1Q8HWA3 334 aa17.66■□□□□ 0.42
Ebf3-208ENSMUST00000210774 Ccar2Q8VDP4 922 aaKnown RBP17.66■□□□□ 0.42
Ebf3-208ENSMUST00000210774 Ccdc34Q3UI66 367 aa17.65■□□□□ 0.42
Ebf3-208ENSMUST00000210774 Erc2Q6PH08 957 aa17.65■□□□□ 0.42
Ebf3-208ENSMUST00000210774 Naip7Q9JIB3 1402 aa17.65■□□□□ 0.42
Ebf3-208ENSMUST00000210774 Zscan22Q8BGS5 496 aa17.65■□□□□ 0.42
Ebf3-208ENSMUST00000210774 Ifi35Q9D8C4 286 aa17.65■□□□□ 0.42
Ebf3-208ENSMUST00000210774 Scaf11E9PZM7 1456 aaKnown RBP17.65■□□□□ 0.42
Ebf3-208ENSMUST00000210774 Tbc1d30Q69ZT9 766 aa17.64■□□□□ 0.42
Ebf3-208ENSMUST00000210774 Rbm33Q9CXK9 1231 aaKnown RBP17.64■□□□□ 0.42
Ebf3-208ENSMUST00000210774 Rims1Q99NE5 1463 aa17.64■□□□□ 0.41
Ebf3-208ENSMUST00000210774 Elp1Q7TT37 1333 aaKnown RBP17.64■□□□□ 0.41
Ebf3-208ENSMUST00000210774 Mctp2Q5RJH2 878 aa17.64■□□□□ 0.41
Ebf3-208ENSMUST00000210774 Nfe2l3Q9WTM4 660 aa17.64■□□□□ 0.41
Ebf3-208ENSMUST00000210774 1700017N19RikA0A087WPJ1 469 aa17.63■□□□□ 0.41
Ebf3-208ENSMUST00000210774 Usp25P57080 1055 aa17.63■□□□□ 0.41
Ebf3-208ENSMUST00000210774 Cgnl1Q6AW69 1298 aa17.63■□□□□ 0.41
Ebf3-208ENSMUST00000210774 Mroh1E0CZ22 1640 aa17.63■□□□□ 0.41
Ebf3-208ENSMUST00000210774 Lrriq3Q14DL3 633 aa17.63■□□□□ 0.41
Ebf3-208ENSMUST00000210774 Arid5bQ8BM75 1188 aaKnown RBP17.63■□□□□ 0.41
Ebf3-208ENSMUST00000210774 Ccz1Q8C1Y8 480 aa17.63■□□□□ 0.41
Ebf3-208ENSMUST00000210774 Bcar3Q9QZK2 820 aa17.63■□□□□ 0.41
Ebf3-208ENSMUST00000210774 Ttc21aQ8C0S4 1314 aa17.63■□□□□ 0.41
Ebf3-208ENSMUST00000210774 Pcdhgc5Q91XW9 944 aa17.62■□□□□ 0.41
Ebf3-208ENSMUST00000210774 Lmtk3Q5XJV6 1424 aa17.62■□□□□ 0.41
Ebf3-208ENSMUST00000210774 Zkscan7E9PVW1 718 aa17.62■□□□□ 0.41
Ebf3-208ENSMUST00000210774 Mrps27Q8BK72 415 aaKnown RBP17.62■□□□□ 0.41
Ebf3-208ENSMUST00000210774 Ccdc171E9Q1U1 1324 aa17.62■□□□□ 0.41
Ebf3-208ENSMUST00000210774 Zfp597E9Q6S0 419 aa17.61■□□□□ 0.41
Ebf3-208ENSMUST00000210774 Hsp90b1P08113 802 aaKnown RBP17.61■□□□□ 0.41
Ebf3-208ENSMUST00000210774 Frat1P70339 274 aa17.61■□□□□ 0.41
Ebf3-208ENSMUST00000210774 DpydQ8CHR6 1025 aa17.61■□□□□ 0.41
Ebf3-208ENSMUST00000210774 Pmfbp1Q9WVQ0 1022 aa17.61■□□□□ 0.41
Ebf3-208ENSMUST00000210774 CltcQ68FD5 1675 aaKnown RBP17.61■□□□□ 0.41
Ebf3-208ENSMUST00000210774 Cfap65Q3V0B4 1847 aa17.61■□□□□ 0.41
Ebf3-208ENSMUST00000210774 MycnP03966 462 aaKnown RBP17.61■□□□□ 0.41
Ebf3-208ENSMUST00000210774 Dnajc2P54103 621 aaKnown RBP17.61■□□□□ 0.41
Ebf3-208ENSMUST00000210774 Kmt5bQ3U8K7 883 aa17.61■□□□□ 0.41
Ebf3-208ENSMUST00000210774 Cep135Q6P5D4 1140 aa17.61■□□□□ 0.41
Ebf3-208ENSMUST00000210774 Mad1l1Q9WTX8 717 aaKnown RBP17.61■□□□□ 0.41
Ebf3-208ENSMUST00000210774 Cavin4A2AMM0 362 aa17.6■□□□□ 0.41
Ebf3-208ENSMUST00000210774 Rtf1A2AQ19 715 aaKnown RBP17.6■□□□□ 0.41
Ebf3-208ENSMUST00000210774 Kiaa1211Q5PR69 1207 aa17.6■□□□□ 0.41
Ebf3-208ENSMUST00000210774 Fam177a1Q8BR63 207 aa17.6■□□□□ 0.41
Ebf3-208ENSMUST00000210774 Ccdc178Q8CDV0 866 aa17.6■□□□□ 0.41
Ebf3-208ENSMUST00000210774 CgnP59242 1191 aa17.6■□□□□ 0.41
Ebf3-208ENSMUST00000210774 Dnajc5gQ8C632 165 aa17.6■□□□□ 0.41
Ebf3-208ENSMUST00000210774 Gprasp1Q5U4C1 1347 aa17.6■□□□□ 0.41
Ebf3-208ENSMUST00000210774 Pola1P33609 1465 aa17.6■□□□□ 0.41
Ebf3-208ENSMUST00000210774 Aldh8a1Q8BH00 487 aa17.59■□□□□ 0.41
Ebf3-208ENSMUST00000210774 Cspp1B2RX88 1205 aa17.59■□□□□ 0.41
Ebf3-208ENSMUST00000210774 Vamp4O70480 141 aa17.59■□□□□ 0.41
Ebf3-208ENSMUST00000210774 Rab3gap1Q80UJ7 981 aa17.59■□□□□ 0.41
Ebf3-208ENSMUST00000210774 Pof1bQ8K4L4 587 aa17.59■□□□□ 0.41
Ebf3-208ENSMUST00000210774 Nop14Q8R3N1 860 aaKnown RBP17.59■□□□□ 0.41
Ebf3-208ENSMUST00000210774 Gcc1Q9D4H2 778 aa17.59■□□□□ 0.41
Ebf3-208ENSMUST00000210774 Stk3Q9JI10 497 aa17.59■□□□□ 0.41
Ebf3-208ENSMUST00000210774 Sipa1l1Q8C0T5 1782 aa17.59■□□□□ 0.41
Ebf3-208ENSMUST00000210774 MaddQ80U28 1577 aa17.59■□□□□ 0.41
Ebf3-208ENSMUST00000210774 1700019A02RikA0A087WPV9 146 aa17.58■□□□□ 0.41
Ebf3-208ENSMUST00000210774 Jakmip1Q8BVL9 626 aa17.58■□□□□ 0.41
Ebf3-208ENSMUST00000210774 Wdr24Q8CFJ9 790 aa17.58■□□□□ 0.41
Retrieved 100 of 22,080 RNA–protein pairs in 29.5 ms