RNA–Protein interactions for RNA: ENSMUST00000200038.1

Chfr-212, Transcript of E3 ubiquitin-protein ligase CHFR, mousemouse

TSL 1 (best) BASIC

Gene Chfr, Length 606 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chfr-212ENSMUST00000200038 Abcc12Q80WJ6 1366 aa17.21■□□□□ 0.35
Chfr-212ENSMUST00000200038 Nkx2-3P97334 362 aa17.21■□□□□ 0.35
Chfr-212ENSMUST00000200038 Btbd11Q6GQW0 1109 aa17.21■□□□□ 0.35
Chfr-212ENSMUST00000200038 Wdhd1P59328 1117 aa17.2■□□□□ 0.34
Chfr-212ENSMUST00000200038 Gpr162Q3UN16 588 aa17.2■□□□□ 0.34
Chfr-212ENSMUST00000200038 HmcesQ8R1M0 353 aaKnown RBP17.2■□□□□ 0.34
Chfr-212ENSMUST00000200038 Sgip1Q8VD37 806 aa17.2■□□□□ 0.34
Chfr-212ENSMUST00000200038 Zfyve9A2A8R0 1397 aa17.19■□□□□ 0.34
Chfr-212ENSMUST00000200038 Adcy9P51830 1353 aa17.19■□□□□ 0.34
Chfr-212ENSMUST00000200038 Aebp2Q9Z248 504 aaKnown RBP17.19■□□□□ 0.34
Chfr-212ENSMUST00000200038 Ric1Q69ZJ7 1422 aa17.19■□□□□ 0.34
Chfr-212ENSMUST00000200038 Tgfb2P27090 414 aa17.18■□□□□ 0.34
Chfr-212ENSMUST00000200038 Rbm26Q6NZN0 1012 aaKnown RBP17.18■□□□□ 0.34
Chfr-212ENSMUST00000200038 Rnaseh2aQ9CWY8 301 aa17.18■□□□□ 0.34
Chfr-212ENSMUST00000200038 Irx6Q9ER75 438 aa17.18■□□□□ 0.34
Chfr-212ENSMUST00000200038 Kiaa1107Q80TK0 1369 aa17.17■□□□□ 0.34
Chfr-212ENSMUST00000200038 Cfap70D3YVL2 1141 aa17.17■□□□□ 0.34
Chfr-212ENSMUST00000200038 Sned1Q70E20 1403 aa17.17■□□□□ 0.34
Chfr-212ENSMUST00000200038 CpzQ8R4V4 654 aa17.17■□□□□ 0.34
Chfr-212ENSMUST00000200038 SnrkQ8VDU5 748 aa17.17■□□□□ 0.34
Chfr-212ENSMUST00000200038 Cers3Q1A3B0 383 aa17.16■□□□□ 0.34
Chfr-212ENSMUST00000200038 Q4VA45 678 aa17.16■□□□□ 0.34
Chfr-212ENSMUST00000200038 Q7TT23 1179 aa17.16■□□□□ 0.34
Chfr-212ENSMUST00000200038 ScaperF8VQ70 1398 aaKnown RBP17.15■□□□□ 0.34
Chfr-212ENSMUST00000200038 Flad1Q8R123 492 aa17.15■□□□□ 0.34
Chfr-212ENSMUST00000200038 Mylk2Q8VCR8 613 aa17.15■□□□□ 0.34
Chfr-212ENSMUST00000200038 Nip7Q9CXK8 180 aaKnown RBP17.15■□□□□ 0.34
Chfr-212ENSMUST00000200038 Tjp1P39447 1745 aaKnown RBP17.15■□□□□ 0.34
Chfr-212ENSMUST00000200038 Apaf1O88879 1249 aa17.14■□□□□ 0.33
Chfr-212ENSMUST00000200038 Tlr8P58682 1032 aa17.14■□□□□ 0.33
Chfr-212ENSMUST00000200038 Nsfl1cQ9CZ44 370 aaKnown RBP17.14■□□□□ 0.33
Chfr-212ENSMUST00000200038 PigbQ9JJQ0 542 aa17.14■□□□□ 0.33
Chfr-212ENSMUST00000200038 TefQ9JLC6 301 aa17.14■□□□□ 0.33
Chfr-212ENSMUST00000200038 Prr29B1ARI9 187 aa17.13■□□□□ 0.33
Chfr-212ENSMUST00000200038 Cnnm1Q0GA42 951 aa17.13■□□□□ 0.33
Chfr-212ENSMUST00000200038 Clcn1Q64347 994 aa17.13■□□□□ 0.33
Chfr-212ENSMUST00000200038 Rpgrip1lQ8CG73 1264 aa17.13■□□□□ 0.33
Chfr-212ENSMUST00000200038 Rapgef4Q9EQZ6 1011 aa17.13■□□□□ 0.33
Chfr-212ENSMUST00000200038 Syde2E9PUP1 1314 aa17.13■□□□□ 0.33
Chfr-212ENSMUST00000200038 Atp1b3P97370 278 aa17.12■□□□□ 0.33
Chfr-212ENSMUST00000200038 Cyp2c67Q569X9 491 aa17.12■□□□□ 0.33
Chfr-212ENSMUST00000200038 1810065E05RikQ5NC41 235 aa17.12■□□□□ 0.33
Chfr-212ENSMUST00000200038 Gm12185Q5NCB2 835 aa17.12■□□□□ 0.33
Chfr-212ENSMUST00000200038 ArsiQ32KI9 573 aa17.11■□□□□ 0.33
Chfr-212ENSMUST00000200038 Zbtb1Q91VL9 713 aa17.11■□□□□ 0.33
Chfr-212ENSMUST00000200038 Srp68Q8BMA6 625 aaKnown RBP17.1■□□□□ 0.33
Chfr-212ENSMUST00000200038 Spef2Q8C9J3 1734 aa17.1■□□□□ 0.33
Chfr-212ENSMUST00000200038 Cyp2c69E9PXC3 491 aa17.09■□□□□ 0.33
Chfr-212ENSMUST00000200038 Cyp2c40P56657 491 aa17.09■□□□□ 0.33
Chfr-212ENSMUST00000200038 Yy1Q00899 414 aa17.09■□□□□ 0.33
Chfr-212ENSMUST00000200038 Cavin4A2AMM0 362 aa17.08■□□□□ 0.32
Chfr-212ENSMUST00000200038 Camkk2Q8C078 588 aa17.08■□□□□ 0.32
Chfr-212ENSMUST00000200038 Golga2Q921M4 999 aa17.08■□□□□ 0.32
Chfr-212ENSMUST00000200038 Taf1dQ9D4V4 322 aa17.08■□□□□ 0.32
Chfr-212ENSMUST00000200038 Swt1Q9DBQ9 907 aa17.08■□□□□ 0.32
Chfr-212ENSMUST00000200038 Strn4P58404 760 aa17.07■□□□□ 0.32
Chfr-212ENSMUST00000200038 Ggnbp2Q5SV77 696 aa17.07■□□□□ 0.32
Chfr-212ENSMUST00000200038 TrhQ62361 256 aa17.07■□□□□ 0.32
Chfr-212ENSMUST00000200038 Wwc2Q6NXJ0 1187 aa17.07■□□□□ 0.32
Chfr-212ENSMUST00000200038 Slfnl1Q8BHW9 410 aa17.07■□□□□ 0.32
Chfr-212ENSMUST00000200038 MetP16056 1379 aa17.06■□□□□ 0.32
Chfr-212ENSMUST00000200038 Usp19Q3UJD6 1360 aa17.06■□□□□ 0.32
Chfr-212ENSMUST00000200038 Atf7ipQ7TT18 1306 aa17.06■□□□□ 0.32
Chfr-212ENSMUST00000200038 CastP51125 788 aa17.06■□□□□ 0.32
Chfr-212ENSMUST00000200038 Iqsec3Q3TES0 1195 aa17.06■□□□□ 0.32
Chfr-212ENSMUST00000200038 FktnQ8R507 461 aa17.06■□□□□ 0.32
Chfr-212ENSMUST00000200038 Gigyf1Q99MR1 1044 aaKnown RBP17.06■□□□□ 0.32
Chfr-212ENSMUST00000200038 Trip6Q9Z1Y4 480 aa17.06■□□□□ 0.32
Chfr-212ENSMUST00000200038 Prdm11A2AGX3 565 aa17.05■□□□□ 0.32
Chfr-212ENSMUST00000200038 Prim1P20664 417 aa17.05■□□□□ 0.32
Chfr-212ENSMUST00000200038 Dpf1Q9QX66 387 aa17.04■□□□□ 0.32
Chfr-212ENSMUST00000200038 Ubn2Q80WC1 1314 aa17.03■□□□□ 0.32
Chfr-212ENSMUST00000200038 Prr5lA2AVJ5 370 aa17.03■□□□□ 0.32
Chfr-212ENSMUST00000200038 Map4k4P97820 1233 aaKnown RBP17.03■□□□□ 0.32
Chfr-212ENSMUST00000200038 Esco1Q69Z69 843 aa17.03■□□□□ 0.32
Chfr-212ENSMUST00000200038 Spon1Q8VCC9 807 aa17.03■□□□□ 0.32
Chfr-212ENSMUST00000200038 Taf7Q9R1C0 341 aa17.03■□□□□ 0.32
Chfr-212ENSMUST00000200038 Pde3aQ9Z0X4 1141 aa17.03■□□□□ 0.32
Chfr-212ENSMUST00000200038 Trpm3Q5F4S9 1721 aa17.03■□□□□ 0.32
Chfr-212ENSMUST00000200038 Tnnt1O88346 262 aa17.02■□□□□ 0.32
Chfr-212ENSMUST00000200038 Slf2Q6P9P0 1278 aa17.02■□□□□ 0.32
Chfr-212ENSMUST00000200038 Prkab2Q6PAM0 271 aa17.02■□□□□ 0.32
Chfr-212ENSMUST00000200038 Exoc6Q8R313 802 aa17.02■□□□□ 0.32
Chfr-212ENSMUST00000200038 Bcl2l13P59017 434 aa17.01■□□□□ 0.31
Chfr-212ENSMUST00000200038 Stra8P70278 393 aa17.01■□□□□ 0.31
Chfr-212ENSMUST00000200038 Zscan21Q07231 555 aa17.01■□□□□ 0.31
Chfr-212ENSMUST00000200038 IarsQ8BU30 1262 aa17.01■□□□□ 0.31
Chfr-212ENSMUST00000200038 Eif4a1P60843 406 aaKnown RBP17■□□□□ 0.31
Chfr-212ENSMUST00000200038 GckrQ91X44 587 aa17■□□□□ 0.31
Chfr-212ENSMUST00000200038 Tktl2Q9D4D4 627 aa17■□□□□ 0.31
Chfr-212ENSMUST00000200038 NgdnQ9DB96 315 aaKnown RBP17■□□□□ 0.31
Chfr-212ENSMUST00000200038 Zswim8Q3UHH1 1832 aaKnown RBP16.99■□□□□ 0.31
Chfr-212ENSMUST00000200038 Pibf1E9Q6K3 756 aa16.99■□□□□ 0.31
Chfr-212ENSMUST00000200038 Dusp27Q148W8 1138 aa16.99■□□□□ 0.31
Chfr-212ENSMUST00000200038 Plch1Q4KWH5 1682 aa16.99■□□□□ 0.31
Chfr-212ENSMUST00000200038 Ubr2Q6WKZ8 1755 aa16.99■□□□□ 0.31
Chfr-212ENSMUST00000200038 Fkbp4P30416 458 aa16.98■□□□□ 0.31
Chfr-212ENSMUST00000200038 Gnl3lQ6PGG6 577 aaKnown RBP16.98■□□□□ 0.31
Chfr-212ENSMUST00000200038 Tango6Q8C3S2 1079 aa16.98■□□□□ 0.31
Chfr-212ENSMUST00000200038 Col1a2Q01149 1372 aa16.98■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 34.6 ms