RNA–Protein interactions for RNA: ENSMUST00000190193.7

Col6a5-203, Transcript of Collagen alpha-5(VI) chain, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Col6a5, Length 9,289 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-203ENSMUST00000190193 GmnnO88513 206 aa11.67□□□□□ -0.54
Col6a5-203ENSMUST00000190193 Hook3Q8BUK6 718 aa11.67□□□□□ -0.54
Col6a5-203ENSMUST00000190193 Ddx58Q6Q899 926 aa11.67□□□□□ -0.54
Col6a5-203ENSMUST00000190193 Cetn2Q9R1K9 172 aa11.67□□□□□ -0.54
Col6a5-203ENSMUST00000190193 Iqca1Q9CUL5 857 aa11.67□□□□□ -0.54
Col6a5-203ENSMUST00000190193 Duox2A2AQ99 1517 aa11.67□□□□□ -0.54
Col6a5-203ENSMUST00000190193 Tmem132aQ922P8 1018 aa11.67□□□□□ -0.54
Col6a5-203ENSMUST00000190193 Pprc1Q6NZN1 1644 aa11.66□□□□□ -0.54
Col6a5-203ENSMUST00000190193 Zscan20B2KFW1 1030 aa11.66□□□□□ -0.54
Col6a5-203ENSMUST00000190193 Tubb5P99024 444 aaKnown RBP11.66□□□□□ -0.54
Col6a5-203ENSMUST00000190193 IqcgQ80W32 419 aa11.66□□□□□ -0.54
Col6a5-203ENSMUST00000190193 Top1mtQ8R4U6 593 aa11.66□□□□□ -0.54
Col6a5-203ENSMUST00000190193 HypkQ9CR41 129 aa11.66□□□□□ -0.54
Col6a5-203ENSMUST00000190193 TefQ9JLC6 301 aa11.66□□□□□ -0.54
Col6a5-203ENSMUST00000190193 Naip2Q9QUK4 1447 aa11.66□□□□□ -0.54
Col6a5-203ENSMUST00000190193 Rprd2Q6NXI6 1469 aaKnown RBP11.66□□□□□ -0.54
Col6a5-203ENSMUST00000190193 Myh11O08638 1972 aa11.66□□□□□ -0.54
Col6a5-203ENSMUST00000190193 Il16O54824 1322 aa11.66□□□□□ -0.54
Col6a5-203ENSMUST00000190193 Thoc2B1AZI6 1594 aaKnown RBP11.66□□□□□ -0.54
Col6a5-203ENSMUST00000190193 Cdc37l1Q9CZP7 335 aa11.66□□□□□ -0.54
Col6a5-203ENSMUST00000190193 Nap1l2P51860 460 aa11.66□□□□□ -0.54
Col6a5-203ENSMUST00000190193 Q7TT23 1179 aa11.66□□□□□ -0.54
Col6a5-203ENSMUST00000190193 PaskQ8CEE6 1383 aa11.65□□□□□ -0.54
Col6a5-203ENSMUST00000190193 Stmn4P63042 189 aa11.65□□□□□ -0.54
Col6a5-203ENSMUST00000190193 Eif3j1Q3UGC7 261 aaKnown RBP11.65□□□□□ -0.54
Col6a5-203ENSMUST00000190193 Eif3j2Q66JS6 263 aa11.65□□□□□ -0.54
Col6a5-203ENSMUST00000190193 Pip4k2bQ80XI4 416 aa11.65□□□□□ -0.54
Col6a5-203ENSMUST00000190193 Tfip11Q9ERA6 838 aaKnown RBP11.65□□□□□ -0.54
Col6a5-203ENSMUST00000190193 Bag4Q8CI61 457 aa11.65□□□□□ -0.54
Col6a5-203ENSMUST00000190193 Aldh1l1Q8R0Y6 902 aa11.65□□□□□ -0.54
Col6a5-203ENSMUST00000190193 Tacc1Q6Y685 774 aa11.65□□□□□ -0.54
Col6a5-203ENSMUST00000190193 Pms1Q8K119 917 aa11.65□□□□□ -0.54
Col6a5-203ENSMUST00000190193 Pof1bQ8K4L4 587 aa11.65□□□□□ -0.54
Col6a5-203ENSMUST00000190193 Washc4Q3UMB9 1173 aa11.65□□□□□ -0.54
Col6a5-203ENSMUST00000190193 Ano10Q8BH79 659 aa11.65□□□□□ -0.54
Col6a5-203ENSMUST00000190193 Fam13aQ8BGI4 693 aa11.65□□□□□ -0.54
Col6a5-203ENSMUST00000190193 Lrriq1Q0P5X1 1673 aa11.65□□□□□ -0.55
Col6a5-203ENSMUST00000190193 ImmtQ8CAQ8 757 aaKnown RBP11.64□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Ccdc158Q8CDI6 1109 aa11.64□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Cwc27Q3TKY6 469 aa11.64□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Ptpdc1Q6NZK8 747 aa11.64□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Stard3nlQ9DCI3 235 aa11.64□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Akap2O54931 893 aa11.64□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Cpa2Q504N0 417 aa11.64□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Calml4Q91WQ9 153 aa11.64□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Stx6Q9JKK1 255 aa11.64□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Myh7Q91Z83 1935 aa11.64□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Cep152A2AUM9 1736 aaKnown RBP11.64□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Nol7Q9D7Z3 254 aaKnown RBP11.64□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Soga1E1U8D0 1418 aa11.63□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Pde1cQ64338 706 aa11.63□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Rassf4Q8CB96 322 aa11.63□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Arid3cA6PWV5 409 aa11.63□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Puf60Q3UEB3 564 aaKnown RBP11.63□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Mmel1Q9JLI3 765 aa11.63□□□□□ -0.55
Col6a5-203ENSMUST00000190193 WizO88286 1684 aaKnown RBP11.63□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Knop1Q9Z2Q2 478 aaKnown RBP11.63□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Irgm2A0A140LIF8 407 aa11.63□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Tex35Q14BK3 207 aa11.63□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Tax1bp1Q3UKC1 814 aaKnown RBP11.63□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Ggt6Q6PDE7 497 aa11.63□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Fyb1O35601 819 aa11.63□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Tsg101Q61187 391 aa11.63□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Ccdc114Q3UX62 658 aa11.63□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Ccdc42Q5SV66 316 aa11.63□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Fam76aQ922G2 307 aa11.63□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Rad54l2Q99NG0 1466 aa11.62□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Maco1Q7TQE6 664 aaKnown RBP11.62□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Mtmr3Q8K296 1196 aa11.62□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Arhgef12Q8R4H2 1543 aaKnown RBP11.62□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Ccdc152E9PX14 254 aa11.62□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Ms4a1P19437 291 aa11.62□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Ccdc172Q810N9 267 aa11.62□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Rasa1E9PYG6 1038 aa11.62□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Bloc1s2Q9CWG9 143 aa11.62□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Ssr1Q9CY50 286 aaKnown RBP11.62□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Fam135bQ9DAI6 1403 aa11.62□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Gsdma2Q32M21 443 aa11.62□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Vps37cQ8R105 352 aa11.62□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Rnf34Q99KR6 376 aa11.62□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Spty2d1Q68FG3 682 aa11.61□□□□□ -0.55
Col6a5-203ENSMUST00000190193 RalylQ8BTF8 293 aa11.61□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Ccdc121E9Q6D3 323 aa11.61□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Serpinb6bO08804 377 aa11.61□□□□□ -0.55
Col6a5-203ENSMUST00000190193 AidaQ8C4Q6 305 aa11.61□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Aimp1P31230 310 aaKnown RBP11.61□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Gjb2Q00977 226 aa11.61□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Top1Q04750 767 aaKnown RBP11.61□□□□□ -0.55
Col6a5-203ENSMUST00000190193 HnrnpmQ9D0E1 729 aaKnown RBP11.61□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Gigyf2Q6Y7W8 1291 aaKnown RBP11.61□□□□□ -0.55
Col6a5-203ENSMUST00000190193 BcanQ61361 883 aa11.61□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Hmg20bQ9Z104 317 aa11.61□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Hip1rQ9JKY5 1068 aa11.6□□□□□ -0.55
Col6a5-203ENSMUST00000190193 L3mbtl2P59178 703 aa11.6□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Iffo1Q8BXL9 562 aa11.6□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Zfp397Q7TNK4 527 aa11.6□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Gbp2Q9Z0E6 589 aa11.6□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Lamc3Q9R0B6 1581 aa11.6□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Apaf1O88879 1249 aa11.6□□□□□ -0.55
Col6a5-203ENSMUST00000190193 Opa1P58281 960 aa11.6□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 26.7 ms