RNA–Protein interactions for RNA: ENSMUST00000173004.1

Lsm2-207, Transcript of U6 snRNA-associated Sm-like protein LSm2, mousemouse

TSL 1 (best) BASIC

Gene Lsm2, Length 870 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2-207ENSMUST00000173004 Ric1Q69ZJ7 1422 aa17.04■□□□□ 0.32
Lsm2-207ENSMUST00000173004 NpcdF8VQB8 469 aa17.04■□□□□ 0.32
Lsm2-207ENSMUST00000173004 Ppp1r37Q8BKR5 712 aa17.04■□□□□ 0.32
Lsm2-207ENSMUST00000173004 Nlgn2Q69ZK9 836 aa17.03■□□□□ 0.32
Lsm2-207ENSMUST00000173004 ThemisQ8BGW0 636 aa17.03■□□□□ 0.32
Lsm2-207ENSMUST00000173004 Col4a5Q63ZW6 1691 aa17.03■□□□□ 0.32
Lsm2-207ENSMUST00000173004 Atg3Q9CPX6 314 aa17.01■□□□□ 0.31
Lsm2-207ENSMUST00000173004 PalmQ9Z0P4 383 aa17.01■□□□□ 0.31
Lsm2-207ENSMUST00000173004 Slc4a9E9PUP3 929 aa17■□□□□ 0.31
Lsm2-207ENSMUST00000173004 Hspa8P63017 646 aaKnown RBP17■□□□□ 0.31
Lsm2-207ENSMUST00000173004 Rasgrp4Q8BTM9 673 aa17■□□□□ 0.31
Lsm2-207ENSMUST00000173004 Ints5Q8CHT3 1018 aa17■□□□□ 0.31
Lsm2-207ENSMUST00000173004 Spire2Q8K1S6 718 aa17■□□□□ 0.31
Lsm2-207ENSMUST00000173004 Crb1Q8VHS2 1405 aa16.99■□□□□ 0.31
Lsm2-207ENSMUST00000173004 Slfnl1Q8BHW9 410 aa16.99■□□□□ 0.31
Lsm2-207ENSMUST00000173004 Lmnb1P14733 588 aaKnown RBP16.98■□□□□ 0.31
Lsm2-207ENSMUST00000173004 RtcbQ99LF4 505 aaKnown RBP16.98■□□□□ 0.31
Lsm2-207ENSMUST00000173004 Stk32bQ9JJX8 414 aa16.98■□□□□ 0.31
Lsm2-207ENSMUST00000173004 4930572O03RikQ8C5Y0 211 aa16.97■□□□□ 0.31
Lsm2-207ENSMUST00000173004 InsrP15208 1372 aa16.97■□□□□ 0.31
Lsm2-207ENSMUST00000173004 Q8C6G1 249 aa16.96■□□□□ 0.31
Lsm2-207ENSMUST00000173004 Stard8Q8K031 1019 aa16.96■□□□□ 0.31
Lsm2-207ENSMUST00000173004 Amhr2Q8K592 568 aa16.96■□□□□ 0.31
Lsm2-207ENSMUST00000173004 Magea8O89012 320 aa16.95■□□□□ 0.3
Lsm2-207ENSMUST00000173004 Aplp2Q06335 707 aa16.95■□□□□ 0.3
Lsm2-207ENSMUST00000173004 Neurod1Q60867 357 aa16.95■□□□□ 0.3
Lsm2-207ENSMUST00000173004 Srp68Q8BMA6 625 aaKnown RBP16.95■□□□□ 0.3
Lsm2-207ENSMUST00000173004 Col5a2Q3U962 1497 aa16.94■□□□□ 0.3
Lsm2-207ENSMUST00000173004 Simc1E9Q6E9 1354 aa16.94■□□□□ 0.3
Lsm2-207ENSMUST00000173004 Tjp1P39447 1745 aaKnown RBP16.94■□□□□ 0.3
Lsm2-207ENSMUST00000173004 PrimpolQ6P1E7 537 aa16.94■□□□□ 0.3
Lsm2-207ENSMUST00000173004 Plagl1Q9JLQ4 704 aa16.94■□□□□ 0.3
Lsm2-207ENSMUST00000173004 Gja5Q01231 358 aa16.93■□□□□ 0.3
Lsm2-207ENSMUST00000173004 Sos1Q62245 1319 aa16.93■□□□□ 0.3
Lsm2-207ENSMUST00000173004 Adamts19P59509 1210 aa16.92■□□□□ 0.3
Lsm2-207ENSMUST00000173004 Tktl2Q9D4D4 627 aa16.92■□□□□ 0.3
Lsm2-207ENSMUST00000173004 Gm21663A0A0G2JE01 267 aa16.91■□□□□ 0.3
Lsm2-207ENSMUST00000173004 Gm7361D3Z6R1 267 aa16.91■□□□□ 0.3
Lsm2-207ENSMUST00000173004 D830030K20RikE9PYQ5 218 aa16.91■□□□□ 0.3
Lsm2-207ENSMUST00000173004 5031410I06RikE9Q4E0 267 aa16.91■□□□□ 0.3
Lsm2-207ENSMUST00000173004 Gm1979E9QAN3 267 aa16.91■□□□□ 0.3
Lsm2-207ENSMUST00000173004 Gm5862K7N5V5 267 aa16.91■□□□□ 0.3
Lsm2-207ENSMUST00000173004 Gm10220K7N660 267 aa16.91■□□□□ 0.3
Lsm2-207ENSMUST00000173004 Gm3043K7N693 218 aa16.91■□□□□ 0.3
Lsm2-207ENSMUST00000173004 Gm16440K7N6G6 218 aa16.91■□□□□ 0.3
Lsm2-207ENSMUST00000173004 Gm2244L7N2A3 218 aa16.91■□□□□ 0.3
Lsm2-207ENSMUST00000173004 Gm3278L7N2D2 218 aa16.91■□□□□ 0.3
Lsm2-207ENSMUST00000173004 Gm8271L7N2E2 218 aa16.91■□□□□ 0.3
Lsm2-207ENSMUST00000173004 Rbm26Q6NZN0 1012 aaKnown RBP16.91■□□□□ 0.3
Lsm2-207ENSMUST00000173004 Dcaf5Q80T85 946 aa16.91■□□□□ 0.3
Lsm2-207ENSMUST00000173004 Cap2Q9CYT6 476 aa16.91■□□□□ 0.3
Lsm2-207ENSMUST00000173004 Zfp646Q6NV66 1788 aa16.91■□□□□ 0.3
Lsm2-207ENSMUST00000173004 Unc5clQ6R653 518 aa16.9■□□□□ 0.3
Lsm2-207ENSMUST00000173004 Lysmd1Q9D0E3 226 aa16.89■□□□□ 0.29
Lsm2-207ENSMUST00000173004 Usp48Q3V0C5 1052 aa16.88■□□□□ 0.29
Lsm2-207ENSMUST00000173004 Tango6Q8C3S2 1079 aa16.88■□□□□ 0.29
Lsm2-207ENSMUST00000173004 Scaf1Q5U4C3 1256 aaKnown RBP16.87■□□□□ 0.29
Lsm2-207ENSMUST00000173004 Birc3O08863 600 aa16.86■□□□□ 0.29
Lsm2-207ENSMUST00000173004 Slc5a1Q8C3K6 665 aa16.86■□□□□ 0.29
Lsm2-207ENSMUST00000173004 Cd248Q91V98 765 aa16.86■□□□□ 0.29
Lsm2-207ENSMUST00000173004 Nup188Q6ZQH8 1759 aa16.86■□□□□ 0.29
Lsm2-207ENSMUST00000173004 Asic4Q7TNS7 539 aa16.85■□□□□ 0.29
Lsm2-207ENSMUST00000173004 Kcnc4Q8R1C0 628 aa16.83■□□□□ 0.28
Lsm2-207ENSMUST00000173004 Ccer2J3QPU5 274 aa16.82■□□□□ 0.28
Lsm2-207ENSMUST00000173004 Hspa5P20029 655 aaKnown RBP16.82■□□□□ 0.28
Lsm2-207ENSMUST00000173004 Tbc1d32Q3URV1 1296 aa16.82■□□□□ 0.28
Lsm2-207ENSMUST00000173004 Jmjd4Q8BFT6 427 aa16.82■□□□□ 0.28
Lsm2-207ENSMUST00000173004 HmcesQ8R1M0 353 aaKnown RBP16.82■□□□□ 0.28
Lsm2-207ENSMUST00000173004 Glis2Q8VDL9 521 aa16.82■□□□□ 0.28
Lsm2-207ENSMUST00000173004 Trap1aP19473 224 aa16.81■□□□□ 0.28
Lsm2-207ENSMUST00000173004 Ptcd1Q8C2E4 695 aaKnown RBP16.81■□□□□ 0.28
Lsm2-207ENSMUST00000173004 Mkrn1Q9QXP6 481 aa16.81■□□□□ 0.28
Lsm2-207ENSMUST00000173004 Flt4P35917 1363 aa16.8■□□□□ 0.28
Lsm2-207ENSMUST00000173004 Wdhd1P59328 1117 aa16.8■□□□□ 0.28
Lsm2-207ENSMUST00000173004 Clcn1Q64347 994 aa16.8■□□□□ 0.28
Lsm2-207ENSMUST00000173004 Ptf1aQ9QX98 324 aa16.8■□□□□ 0.28
Lsm2-207ENSMUST00000173004 Scn11aQ9R053 1765 aa16.79■□□□□ 0.28
Lsm2-207ENSMUST00000173004 Eid3Q3V124 375 aa16.79■□□□□ 0.28
Lsm2-207ENSMUST00000173004 Pdzph1Q8BGR1 1238 aa16.79■□□□□ 0.28
Lsm2-207ENSMUST00000173004 Eif3bQ8JZQ9 803 aaKnown RBP16.79■□□□□ 0.28
Lsm2-207ENSMUST00000173004 Ripk3Q9QZL0 486 aa16.79■□□□□ 0.28
Lsm2-207ENSMUST00000173004 Ncor1Q60974 2453 aa16.79■□□□□ 0.28
Lsm2-207ENSMUST00000173004 Eya1P97767 591 aa16.78■□□□□ 0.28
Lsm2-207ENSMUST00000173004 Pbx4Q99NE9 378 aa16.78■□□□□ 0.28
Lsm2-207ENSMUST00000173004 Pou3f3P31361 497 aa16.77■□□□□ 0.28
Lsm2-207ENSMUST00000173004 Znf219Q6IQX8 726 aa16.77■□□□□ 0.28
Lsm2-207ENSMUST00000173004 Podnl1Q6P3Y9 559 aa16.77■□□□□ 0.28
Lsm2-207ENSMUST00000173004 Trip6Q9Z1Y4 480 aa16.77■□□□□ 0.28
Lsm2-207ENSMUST00000173004 Atp1b3P97370 278 aa16.76■□□□□ 0.27
Lsm2-207ENSMUST00000173004 Lrrc43Q3V0L5 667 aa16.76■□□□□ 0.27
Lsm2-207ENSMUST00000173004 Nkx2-3P97334 362 aa16.75■□□□□ 0.27
Lsm2-207ENSMUST00000173004 Htra3Q9D236 459 aa16.75■□□□□ 0.27
Lsm2-207ENSMUST00000173004 Phkg2Q9DB30 406 aa16.75■□□□□ 0.27
Lsm2-207ENSMUST00000173004 Pappa2E9PZ87 1789 aa16.74■□□□□ 0.27
Lsm2-207ENSMUST00000173004 Ubn2Q80WC1 1314 aa16.74■□□□□ 0.27
Lsm2-207ENSMUST00000173004 Trpm7Q923J1 1863 aa16.74■□□□□ 0.27
Lsm2-207ENSMUST00000173004 Dcdc2bF7BCK0 340 aa16.74■□□□□ 0.27
Lsm2-207ENSMUST00000173004 Zfp831A2ADM8 1628 aa16.74■□□□□ 0.27
Lsm2-207ENSMUST00000173004 Gm42715A0A087WP63 3095 aaKnown RBP16.73■□□□□ 0.27
Lsm2-207ENSMUST00000173004 Parp14Q2EMV9 1817 aa16.73■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 44.6 ms