RNA–Protein interactions for RNA: ENSMUST00000168631.7

Pkp4-210, Transcript of Plakophilin-4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Pkp4, Length 4,484 nt, Biotype protein coding, Subcellular localisation Pseudopodium .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pkp4-210ENSMUST00000168631 Hs1bp3Q3TC93 395 aa21.31■■□□□ 1
Pkp4-210ENSMUST00000168631 Larp1Q6ZQ58 1072 aaKnown RBP21.31■■□□□ 1
Pkp4-210ENSMUST00000168631 Tceanc2Q8R2M0 207 aa21.31■■□□□ 1
Pkp4-210ENSMUST00000168631 Farp2Q91VS8 1065 aa21.31■■□□□ 1
Pkp4-210ENSMUST00000168631 Polr3dQ91WD1 398 aa21.31■■□□□ 1
Pkp4-210ENSMUST00000168631 Elp1Q7TT37 1333 aaKnown RBP21.31■■□□□ 1
Pkp4-210ENSMUST00000168631 NapbP28663 298 aa21.3■■□□□ 1
Pkp4-210ENSMUST00000168631 Anp32eP97822 260 aaKnown RBP21.3■■□□□ 1
Pkp4-210ENSMUST00000168631 Bag1Q60739 355 aa21.3■■□□□ 1
Pkp4-210ENSMUST00000168631 Iqca1Q9CUL5 857 aa21.3■■□□□ 1
Pkp4-210ENSMUST00000168631 Galntl5Q9D4M9 431 aa21.3■■□□□ 1
Pkp4-210ENSMUST00000168631 Nup133Q8R0G9 1155 aa21.3■■□□□ 1
Pkp4-210ENSMUST00000168631 AI481877A2ALV5 1481 aa21.3■■□□□ 1
Pkp4-210ENSMUST00000168631 Ces1hD3Z298 562 aa21.29■■□□□ 1
Pkp4-210ENSMUST00000168631 Golim4Q8BXA1 655 aa21.29■■□□□ 1
Pkp4-210ENSMUST00000168631 GptQ8QZR5 496 aa21.29■■□□□ 1
Pkp4-210ENSMUST00000168631 Cep55Q8BT07 462 aa21.29■■□□□ 1
Pkp4-210ENSMUST00000168631 Ythdc2B2RR83 1445 aaKnown RBP21.29■■□□□ 1
Pkp4-210ENSMUST00000168631 Phlpp2Q8BXA7 1320 aa21.29■■□□□ 1
Pkp4-210ENSMUST00000168631 Hand2Q61039 217 aa21.29■■□□□ 1
Pkp4-210ENSMUST00000168631 Jmjd4Q8BFT6 427 aa21.29■■□□□ 1
Pkp4-210ENSMUST00000168631 ZwintQ9CQU5 252 aa21.29■■□□□ 1
Pkp4-210ENSMUST00000168631 Dhx8A2A4P0 1244 aaKnown RBP21.28■■□□□ 1
Pkp4-210ENSMUST00000168631 Znf692Q3U381 531 aa21.28■■□□□ 1
Pkp4-210ENSMUST00000168631 BC005561E9Q5E2 1589 aa21.28■■□□□ 1
Pkp4-210ENSMUST00000168631 Ccdc66Q6NS45 935 aa21.28■■□□□ 1
Pkp4-210ENSMUST00000168631 Rbm19Q8R3C6 952 aaKnown RBP21.28■■□□□ 1
Pkp4-210ENSMUST00000168631 Mum1Q6DID5 682 aa21.28■■□□□ 1
Pkp4-210ENSMUST00000168631 Ddx58Q6Q899 926 aa21.28■■□□□ 1
Pkp4-210ENSMUST00000168631 Dzip1Q8BMD2 852 aa21.28■■□□□ 1
Pkp4-210ENSMUST00000168631 Kiaa0753Q6A000 959 aa21.27■■□□□ 1
Pkp4-210ENSMUST00000168631 Slf2Q6P9P0 1278 aa21.27■■□□□ 1
Pkp4-210ENSMUST00000168631 Liat1Q810M6 228 aa21.27■■□□□ 1
Pkp4-210ENSMUST00000168631 Paf1Q8K2T8 535 aa21.27■■□□□ 1
Pkp4-210ENSMUST00000168631 Rai14Q9EP71 979 aaKnown RBP21.27■■□□□ 1
Pkp4-210ENSMUST00000168631 Cyp26c1B2RXA7 518 aa21.27■■□□□ 1
Pkp4-210ENSMUST00000168631 Gnl2Q99LH1 728 aaKnown RBP21.27■■□□□ 1
Pkp4-210ENSMUST00000168631 Prim1P20664 417 aa21.27■□□□□ 0.99
Pkp4-210ENSMUST00000168631 Klc3Q91W40 508 aa21.27■□□□□ 0.99
Pkp4-210ENSMUST00000168631 Themis2Q91YX0 663 aa21.27■□□□□ 0.99
Pkp4-210ENSMUST00000168631 Igflr1Q3U4N7 345 aa21.26■□□□□ 0.99
Pkp4-210ENSMUST00000168631 Mapkbp1Q6NS57 1503 aa21.26■□□□□ 0.99
Pkp4-210ENSMUST00000168631 Asxl2Q8BZ32 1370 aa21.26■□□□□ 0.99
Pkp4-210ENSMUST00000168631 MycnP03966 462 aaKnown RBP21.26■□□□□ 0.99
Pkp4-210ENSMUST00000168631 Nsfl1cQ9CZ44 370 aaKnown RBP21.26■□□□□ 0.99
Pkp4-210ENSMUST00000168631 Frmpd2A0A140LI67 1392 aa21.26■□□□□ 0.99
Pkp4-210ENSMUST00000168631 Fam184aE9PW83 1143 aa21.25■□□□□ 0.99
Pkp4-210ENSMUST00000168631 Stim1P70302 685 aa21.25■□□□□ 0.99
Pkp4-210ENSMUST00000168631 Zrsr2Q62377 462 aaKnown RBP21.25■□□□□ 0.99
Pkp4-210ENSMUST00000168631 Pet2A2AHY8 747 aa21.25■□□□□ 0.99
Pkp4-210ENSMUST00000168631 Secisbp2lQ6A098 1086 aaKnown RBP21.25■□□□□ 0.99
Pkp4-210ENSMUST00000168631 Abcd1P48410 736 aa21.24■□□□□ 0.99
Pkp4-210ENSMUST00000168631 Jarid2Q62315 1234 aa21.24■□□□□ 0.99
Pkp4-210ENSMUST00000168631 Fancd2Q80V62 1450 aa21.24■□□□□ 0.99
Pkp4-210ENSMUST00000168631 Eif4g1Q6NZJ6 1600 aaKnown RBP21.24■□□□□ 0.99
Pkp4-210ENSMUST00000168631 Rasa1E9PYG6 1038 aa21.24■□□□□ 0.99
Pkp4-210ENSMUST00000168631 Terf2O35144 541 aa21.24■□□□□ 0.99
Pkp4-210ENSMUST00000168631 Ddx46Q569Z5 1032 aaKnown RBP21.24■□□□□ 0.99
Pkp4-210ENSMUST00000168631 Larp6Q8BN59 492 aa21.24■□□□□ 0.99
Pkp4-210ENSMUST00000168631 Ccdc39Q9D5Y1 937 aa21.23■□□□□ 0.99
Pkp4-210ENSMUST00000168631 Echdc1Q9D9V3 322 aa21.23■□□□□ 0.99
Pkp4-210ENSMUST00000168631 Riok1Q922Q2 567 aa21.23■□□□□ 0.99
Pkp4-210ENSMUST00000168631 Nkx1-2P42580 305 aa21.23■□□□□ 0.99
Pkp4-210ENSMUST00000168631 Trim27Q62158 513 aa21.23■□□□□ 0.99
Pkp4-210ENSMUST00000168631 Cdca7Q9D0M2 382 aa21.23■□□□□ 0.99
Pkp4-210ENSMUST00000168631 PxdnQ3UQ28 1475 aa21.22■□□□□ 0.99
Pkp4-210ENSMUST00000168631 Rsph6aQ8CDR2 708 aa21.22■□□□□ 0.99
Pkp4-210ENSMUST00000168631 Bag4Q8CI61 457 aa21.22■□□□□ 0.99
Pkp4-210ENSMUST00000168631 Pik3r4Q8VD65 1358 aa21.22■□□□□ 0.99
Pkp4-210ENSMUST00000168631 Gnat3Q3V3I2 354 aa21.21■□□□□ 0.99
Pkp4-210ENSMUST00000168631 Eif4a2P10630 407 aa21.21■□□□□ 0.99
Pkp4-210ENSMUST00000168631 CalcaP70160 136 aa21.21■□□□□ 0.99
Pkp4-210ENSMUST00000168631 Anapc15-psA0A140T8L6 141 aa21.21■□□□□ 0.99
Pkp4-210ENSMUST00000168631 Kif3cO35066 796 aa21.21■□□□□ 0.99
Pkp4-210ENSMUST00000168631 Gas2l2Q5SSG4 860 aa21.21■□□□□ 0.99
Pkp4-210ENSMUST00000168631 Kdm5bQ80Y84 1544 aa21.21■□□□□ 0.99
Pkp4-210ENSMUST00000168631 Exoc5Q3TPX4 708 aa21.2■□□□□ 0.98
Pkp4-210ENSMUST00000168631 Bin1O08539 588 aaKnown RBP21.2■□□□□ 0.98
Pkp4-210ENSMUST00000168631 Ankle2Q6P1H6 964 aa21.2■□□□□ 0.98
Pkp4-210ENSMUST00000168631 Ccdc178Q8CDV0 866 aa21.2■□□□□ 0.98
Pkp4-210ENSMUST00000168631 Dnajc10Q9DC23 793 aa21.19■□□□□ 0.98
Pkp4-210ENSMUST00000168631 Trim25Q61510 634 aaKnown RBP21.19■□□□□ 0.98
Pkp4-210ENSMUST00000168631 Pknox2Q8BG99 474 aa21.19■□□□□ 0.98
Pkp4-210ENSMUST00000168631 Stx6Q9JKK1 255 aa21.19■□□□□ 0.98
Pkp4-210ENSMUST00000168631 CenphQ9QYM8 241 aa21.19■□□□□ 0.98
Pkp4-210ENSMUST00000168631 DroshaQ5HZJ0 1373 aaKnown RBP21.19■□□□□ 0.98
Pkp4-210ENSMUST00000168631 Ifit1bl2Q3U687 466 aa21.19■□□□□ 0.98
Pkp4-210ENSMUST00000168631 Limch1Q3UH68 1057 aa21.19■□□□□ 0.98
Pkp4-210ENSMUST00000168631 Nat10Q8K224 1024 aaKnown RBP21.19■□□□□ 0.98
Pkp4-210ENSMUST00000168631 Lmbr1Q9JIT0 490 aa21.19■□□□□ 0.98
Pkp4-210ENSMUST00000168631 Lmbr1lQ9D1E5 489 aa21.19■□□□□ 0.98
Pkp4-210ENSMUST00000168631 ItpripQ3TNL8 555 aa21.18■□□□□ 0.98
Pkp4-210ENSMUST00000168631 Znf653Q6YND2 615 aa21.18■□□□□ 0.98
Pkp4-210ENSMUST00000168631 Nip7Q9CXK8 180 aaKnown RBP21.18■□□□□ 0.98
Pkp4-210ENSMUST00000168631 Cyp7a1Q64505 503 aa21.18■□□□□ 0.98
Pkp4-210ENSMUST00000168631 Wasf1Q8R5H6 559 aa21.18■□□□□ 0.98
Pkp4-210ENSMUST00000168631 CenpqQ9CPQ5 267 aa21.18■□□□□ 0.98
Pkp4-210ENSMUST00000168631 Pip4k2aO70172 405 aa21.18■□□□□ 0.98
Pkp4-210ENSMUST00000168631 Pdia4P08003 638 aaKnown RBP21.18■□□□□ 0.98
Pkp4-210ENSMUST00000168631 Pa2g4P50580 394 aaKnown RBP21.18■□□□□ 0.98
Retrieved 100 of 22,080 RNA–protein pairs in 35.4 ms