RNA–Protein interactions for RNA: ENSMUST00000129269.7

Stag1-206, Transcript of Cohesin subunit SA-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Stag1, Length 6,186 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1-206ENSMUST00000129269 Gcc1Q9D4H2 778 aa16.45■□□□□ 0.22
Stag1-206ENSMUST00000129269 Epb41l3Q9WV92 929 aa16.45■□□□□ 0.22
Stag1-206ENSMUST00000129269 Matr3Q8K310 846 aaKnown RBP16.45■□□□□ 0.22
Stag1-206ENSMUST00000129269 Glipr1l2Q9CQ35 332 aa16.45■□□□□ 0.22
Stag1-206ENSMUST00000129269 Samm50Q8BGH2 469 aa16.44■□□□□ 0.22
Stag1-206ENSMUST00000129269 Ccdc183A2AJB1 534 aa16.44■□□□□ 0.22
Stag1-206ENSMUST00000129269 MvpQ9EQK5 861 aa16.44■□□□□ 0.22
Stag1-206ENSMUST00000129269 Cyp26c1B2RXA7 518 aa16.44■□□□□ 0.22
Stag1-206ENSMUST00000129269 AnlnQ8K298 1121 aaKnown RBP16.44■□□□□ 0.22
Stag1-206ENSMUST00000129269 Dennd4bQ3U1Y4 1499 aa16.44■□□□□ 0.22
Stag1-206ENSMUST00000129269 Ubxn4Q8VCH8 506 aa16.44■□□□□ 0.22
Stag1-206ENSMUST00000129269 Ddx17Q501J6 650 aaKnown RBP16.43■□□□□ 0.22
Stag1-206ENSMUST00000129269 Ddx46Q569Z5 1032 aaKnown RBP16.43■□□□□ 0.22
Stag1-206ENSMUST00000129269 Ppp2r3aB2RXC8 1150 aa16.43■□□□□ 0.22
Stag1-206ENSMUST00000129269 Kdm5bQ80Y84 1544 aa16.43■□□□□ 0.22
Stag1-206ENSMUST00000129269 Ift74Q8BKE9 600 aa16.43■□□□□ 0.22
Stag1-206ENSMUST00000129269 Lrrfip2Q91WK0 415 aa16.43■□□□□ 0.22
Stag1-206ENSMUST00000129269 Ssr1Q9CY50 286 aaKnown RBP16.43■□□□□ 0.22
Stag1-206ENSMUST00000129269 Hdac9Q99N13 588 aa16.42■□□□□ 0.22
Stag1-206ENSMUST00000129269 Nol7Q9D7Z3 254 aaKnown RBP16.42■□□□□ 0.22
Stag1-206ENSMUST00000129269 Ppp1r42Q8R1Z4 357 aa16.42■□□□□ 0.22
Stag1-206ENSMUST00000129269 Cul5Q9D5V5 780 aa16.41■□□□□ 0.22
Stag1-206ENSMUST00000129269 SelenooQ9DBC0 667 aa16.41■□□□□ 0.22
Stag1-206ENSMUST00000129269 Bag3Q9JLV1 577 aaKnown RBP16.41■□□□□ 0.22
Stag1-206ENSMUST00000129269 Rapgef6Q5NCJ1 1609 aa16.41■□□□□ 0.22
Stag1-206ENSMUST00000129269 Gcom1E9PZ54 550 aa16.41■□□□□ 0.22
Stag1-206ENSMUST00000129269 MyzapQ3UIJ9 466 aa16.41■□□□□ 0.22
Stag1-206ENSMUST00000129269 Ankle2Q6P1H6 964 aa16.41■□□□□ 0.22
Stag1-206ENSMUST00000129269 Slain2Q8CI08 581 aa16.41■□□□□ 0.22
Stag1-206ENSMUST00000129269 Tango6Q8C3S2 1079 aa16.41■□□□□ 0.22
Stag1-206ENSMUST00000129269 CarsQ9ER72 831 aaKnown RBP16.41■□□□□ 0.22
Stag1-206ENSMUST00000129269 Gnat3Q3V3I2 354 aa16.4■□□□□ 0.22
Stag1-206ENSMUST00000129269 Rnf214Q8BFU3 668 aaKnown RBP16.4■□□□□ 0.22
Stag1-206ENSMUST00000129269 Pdcd6ipQ9WU78 869 aaKnown RBP16.4■□□□□ 0.22
Stag1-206ENSMUST00000129269 Cdkl5Q3UTQ8 938 aa16.4■□□□□ 0.22
Stag1-206ENSMUST00000129269 Mum1Q6DID5 682 aa16.4■□□□□ 0.22
Stag1-206ENSMUST00000129269 Slc4a8Q8JZR6 1089 aa16.4■□□□□ 0.22
Stag1-206ENSMUST00000129269 Iqca1Q9CUL5 857 aa16.4■□□□□ 0.22
Stag1-206ENSMUST00000129269 Cnnm3Q32NY4 713 aa16.4■□□□□ 0.22
Stag1-206ENSMUST00000129269 Klhdc4Q921I2 584 aa16.4■□□□□ 0.22
Stag1-206ENSMUST00000129269 Abcc1O35379 1528 aa16.39■□□□□ 0.21
Stag1-206ENSMUST00000129269 Speer4dL7N216 212 aa16.39■□□□□ 0.21
Stag1-206ENSMUST00000129269 Plekho1Q9JIY0 408 aa16.39■□□□□ 0.21
Stag1-206ENSMUST00000129269 Izumo3A6PWV3 263 aa16.39■□□□□ 0.21
Stag1-206ENSMUST00000129269 Zbtb21E9Q444 1094 aa16.39■□□□□ 0.21
Stag1-206ENSMUST00000129269 Pknox2Q8BG99 474 aa16.39■□□□□ 0.21
Stag1-206ENSMUST00000129269 Tmem67Q8BR76 992 aa16.39■□□□□ 0.21
Stag1-206ENSMUST00000129269 Dydc2Q9D3X8 139 aa16.39■□□□□ 0.21
Stag1-206ENSMUST00000129269 SetQ9EQU5 289 aaKnown RBP16.39■□□□□ 0.21
Stag1-206ENSMUST00000129269 Letm1Q9Z2I0 738 aa16.39■□□□□ 0.21
Stag1-206ENSMUST00000129269 Fam170aQ66LM6 333 aa16.39■□□□□ 0.21
Stag1-206ENSMUST00000129269 Eif5P59325 429 aaKnown RBP16.38■□□□□ 0.21
Stag1-206ENSMUST00000129269 NinlQ6ZQ12 1394 aa16.38■□□□□ 0.21
Stag1-206ENSMUST00000129269 Il1rapl2Q9ERS6 686 aa16.38■□□□□ 0.21
Stag1-206ENSMUST00000129269 Q9D5Q8 446 aa16.38■□□□□ 0.21
Stag1-206ENSMUST00000129269 Cdc45Q9Z1X9 566 aa16.38■□□□□ 0.21
Stag1-206ENSMUST00000129269 Trappc8E9PWG2 1437 aa16.37■□□□□ 0.21
Stag1-206ENSMUST00000129269 Prkar2bP31324 416 aa16.37■□□□□ 0.21
Stag1-206ENSMUST00000129269 Sde2Q8K1J5 448 aaKnown RBP16.37■□□□□ 0.21
Stag1-206ENSMUST00000129269 Cct4P80315 539 aaKnown RBP16.37■□□□□ 0.21
Stag1-206ENSMUST00000129269 Rufy2Q8R4C2 606 aa16.37■□□□□ 0.21
Stag1-206ENSMUST00000129269 Zbtb3Q91X45 518 aa16.37■□□□□ 0.21
Stag1-206ENSMUST00000129269 Stim1P70302 685 aa16.37■□□□□ 0.21
Stag1-206ENSMUST00000129269 Kif18aQ91WD7 886 aa16.37■□□□□ 0.21
Stag1-206ENSMUST00000129269 Hs6st3Q9QYK4 470 aa16.37■□□□□ 0.21
Stag1-206ENSMUST00000129269 Kif21aQ9QXL2 1672 aa16.36■□□□□ 0.21
Stag1-206ENSMUST00000129269 Sos1Q62245 1319 aa16.36■□□□□ 0.21
Stag1-206ENSMUST00000129269 Casp1P29452 402 aa16.36■□□□□ 0.21
Stag1-206ENSMUST00000129269 Znf518aB2RRF6 1478 aaKnown RBP16.36■□□□□ 0.21
Stag1-206ENSMUST00000129269 Wdr7Q920I9 1489 aa16.36■□□□□ 0.21
Stag1-206ENSMUST00000129269 Slc13a4Q8BZ82 625 aa16.36■□□□□ 0.21
Stag1-206ENSMUST00000129269 Fez1Q8K0X8 392 aa16.36■□□□□ 0.21
Stag1-206ENSMUST00000129269 Eif4g1Q6NZJ6 1600 aaKnown RBP16.36■□□□□ 0.21
Stag1-206ENSMUST00000129269 Asxl1P59598 1514 aa16.36■□□□□ 0.21
Stag1-206ENSMUST00000129269 Cep55Q8BT07 462 aa16.36■□□□□ 0.21
Stag1-206ENSMUST00000129269 Stxbp4Q9WV89 557 aa16.36■□□□□ 0.21
Stag1-206ENSMUST00000129269 IntuQ059U7 942 aa16.36■□□□□ 0.21
Stag1-206ENSMUST00000129269 Cadps2Q8BYR5 1297 aa16.36■□□□□ 0.21
Stag1-206ENSMUST00000129269 Ptcd1Q8C2E4 695 aaKnown RBP16.36■□□□□ 0.21
Stag1-206ENSMUST00000129269 WizO88286 1684 aaKnown RBP16.36■□□□□ 0.21
Stag1-206ENSMUST00000129269 Cacna2d4Q5RJF7 1116 aa16.36■□□□□ 0.21
Stag1-206ENSMUST00000129269 Lrrc45Q8CIM1 670 aa16.36■□□□□ 0.21
Stag1-206ENSMUST00000129269 Hmgn5Q9JL35 406 aa16.36■□□□□ 0.21
Stag1-206ENSMUST00000129269 Rapgef3Q8VCC8 918 aa16.35■□□□□ 0.21
Stag1-206ENSMUST00000129269 Gpr162Q3UN16 588 aa16.35■□□□□ 0.21
Stag1-206ENSMUST00000129269 Stx8O88983 236 aa16.35■□□□□ 0.21
Stag1-206ENSMUST00000129269 Plekhm2Q80TQ5 1018 aa16.35■□□□□ 0.21
Stag1-206ENSMUST00000129269 Zap70P43404 618 aa16.34■□□□□ 0.21
Stag1-206ENSMUST00000129269 Miga2Q8BK03 593 aa16.34■□□□□ 0.21
Stag1-206ENSMUST00000129269 Ncoa3O09000 1398 aa16.34■□□□□ 0.21
Stag1-206ENSMUST00000129269 Naip2Q9QUK4 1447 aa16.34■□□□□ 0.21
Stag1-206ENSMUST00000129269 Ccdc172Q810N9 267 aa16.34■□□□□ 0.21
Stag1-206ENSMUST00000129269 Tmem143Q8VD26 458 aa16.34■□□□□ 0.21
Stag1-206ENSMUST00000129269 Gpatch8A2A6A1 1505 aa16.33■□□□□ 0.21
Stag1-206ENSMUST00000129269 Hand2Q61039 217 aa16.33■□□□□ 0.21
Stag1-206ENSMUST00000129269 Bms1Q6PGF5 1284 aaKnown RBP16.33■□□□□ 0.2
Stag1-206ENSMUST00000129269 Myl6bQ8CI43 207 aa16.33■□□□□ 0.2
Stag1-206ENSMUST00000129269 Thoc2B1AZI6 1594 aaKnown RBP16.33■□□□□ 0.2
Stag1-206ENSMUST00000129269 Eme2Q56A04 373 aa16.33■□□□□ 0.2
Stag1-206ENSMUST00000129269 Aldh1l1Q8R0Y6 902 aa16.33■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 17.4 ms