RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 Plcd4Q8K3R3 807 aa21.65■■□□□ 1.06
Scaf11-201ENSMUST00000047835 Ppip5k1A2ARP1 1436 aa21.65■■□□□ 1.06
Scaf11-201ENSMUST00000047835 Gjb2Q00977 226 aa21.65■■□□□ 1.06
Scaf11-201ENSMUST00000047835 Zap70P43404 618 aa21.65■■□□□ 1.06
Scaf11-201ENSMUST00000047835 Wwc1Q5SXA9 1104 aa21.65■■□□□ 1.06
Scaf11-201ENSMUST00000047835 Ttc5Q99LG4 440 aa21.65■■□□□ 1.06
Scaf11-201ENSMUST00000047835 Efcab2Q9CQ46 164 aa21.65■■□□□ 1.06
Scaf11-201ENSMUST00000047835 Ftsj3Q9DBE9 838 aaKnown RBP21.64■■□□□ 1.06
Scaf11-201ENSMUST00000047835 Znf518aB2RRF6 1478 aaKnown RBP21.64■■□□□ 1.06
Scaf11-201ENSMUST00000047835 Ces1hD3Z298 562 aa21.64■■□□□ 1.05
Scaf11-201ENSMUST00000047835 Erich4Q3UNU4 136 aa21.64■■□□□ 1.05
Scaf11-201ENSMUST00000047835 Dnajc10Q9DC23 793 aa21.64■■□□□ 1.05
Scaf11-201ENSMUST00000047835 Gnat3Q3V3I2 354 aa21.64■■□□□ 1.05
Scaf11-201ENSMUST00000047835 Taf3Q5HZG4 932 aa21.63■■□□□ 1.05
Scaf11-201ENSMUST00000047835 Olfml1Q8BSH2 233 aa21.63■■□□□ 1.05
Scaf11-201ENSMUST00000047835 NapbP28663 298 aa21.63■■□□□ 1.05
Scaf11-201ENSMUST00000047835 Cwc25Q9DBF7 416 aa21.63■■□□□ 1.05
Scaf11-201ENSMUST00000047835 Tmem67Q8BR76 992 aa21.63■■□□□ 1.05
Scaf11-201ENSMUST00000047835 Dennd4bQ3U1Y4 1499 aa21.62■■□□□ 1.05
Scaf11-201ENSMUST00000047835 Cyp26c1B2RXA7 518 aa21.62■■□□□ 1.05
Scaf11-201ENSMUST00000047835 Ccnl1Q52KE7 532 aaKnown RBP21.62■■□□□ 1.05
Scaf11-201ENSMUST00000047835 Smarcc1P97496 1104 aa21.62■■□□□ 1.05
Scaf11-201ENSMUST00000047835 Igflr1Q3U4N7 345 aa21.62■■□□□ 1.05
Scaf11-201ENSMUST00000047835 Ppp6r1Q7TSI3 856 aa21.62■■□□□ 1.05
Scaf11-201ENSMUST00000047835 Smc5Q8CG46 1101 aaKnown RBP21.62■■□□□ 1.05
Scaf11-201ENSMUST00000047835 Pik3r4Q8VD65 1358 aa21.62■■□□□ 1.05
Scaf11-201ENSMUST00000047835 Ssh1Q76I79 1042 aa21.62■■□□□ 1.05
Scaf11-201ENSMUST00000047835 Eif4a2P10630 407 aa21.61■■□□□ 1.05
Scaf11-201ENSMUST00000047835 Ankle2Q6P1H6 964 aa21.61■■□□□ 1.05
Scaf11-201ENSMUST00000047835 Samm50Q8BGH2 469 aa21.61■■□□□ 1.05
Scaf11-201ENSMUST00000047835 NsmfQ99NF2 532 aa21.61■■□□□ 1.05
Scaf11-201ENSMUST00000047835 TnnQ80Z71 1560 aa21.61■■□□□ 1.05
Scaf11-201ENSMUST00000047835 Slc7a3P70423 618 aa21.61■■□□□ 1.05
Scaf11-201ENSMUST00000047835 Uspl1Q3ULM6 1089 aa21.61■■□□□ 1.05
Scaf11-201ENSMUST00000047835 Fam83gQ5SWY7 812 aa21.6■■□□□ 1.05
Scaf11-201ENSMUST00000047835 Cep55Q8BT07 462 aa21.6■■□□□ 1.05
Scaf11-201ENSMUST00000047835 Tango6Q8C3S2 1079 aa21.6■■□□□ 1.05
Scaf11-201ENSMUST00000047835 Hoxa7P02830 229 aa21.6■■□□□ 1.05
Scaf11-201ENSMUST00000047835 Iqca1Q9CUL5 857 aa21.6■■□□□ 1.05
Scaf11-201ENSMUST00000047835 Hoxb7P09024 217 aa21.59■■□□□ 1.05
Scaf11-201ENSMUST00000047835 HmmrQ00547 794 aaKnown RBP21.59■■□□□ 1.05
Scaf11-201ENSMUST00000047835 Tmem87bQ8BKU8 555 aa21.59■■□□□ 1.05
Scaf11-201ENSMUST00000047835 ScaperF8VQ70 1398 aaKnown RBP21.59■■□□□ 1.05
Scaf11-201ENSMUST00000047835 Ankrd44B2RXR6 993 aa21.59■■□□□ 1.05
Scaf11-201ENSMUST00000047835 Nup88Q8CEC0 753 aaKnown RBP21.59■■□□□ 1.05
Scaf11-201ENSMUST00000047835 Eif5P59325 429 aaKnown RBP21.59■■□□□ 1.05
Scaf11-201ENSMUST00000047835 Echdc1Q9D9V3 322 aa21.59■■□□□ 1.05
Scaf11-201ENSMUST00000047835 Ccdc34Q3UI66 367 aa21.58■■□□□ 1.05
Scaf11-201ENSMUST00000047835 Vps37dQ810I0 261 aa21.58■■□□□ 1.05
Scaf11-201ENSMUST00000047835 Ankrd13dQ6PD24 605 aa21.58■■□□□ 1.05
Scaf11-201ENSMUST00000047835 Polr3dQ91WD1 398 aa21.58■■□□□ 1.05
Scaf11-201ENSMUST00000047835 Camsap2Q8C1B1 1461 aa21.58■■□□□ 1.05
Scaf11-201ENSMUST00000047835 Slc14a2Q8R4T9 930 aa21.58■■□□□ 1.04
Scaf11-201ENSMUST00000047835 Adcy10Q8C0T9 1614 aa21.58■■□□□ 1.04
Scaf11-201ENSMUST00000047835 Zmym4A2A791 1549 aaKnown RBP21.57■■□□□ 1.04
Scaf11-201ENSMUST00000047835 Wasf1Q8R5H6 559 aa21.57■■□□□ 1.04
Scaf11-201ENSMUST00000047835 Pdcl3Q8BVF2 240 aa21.56■■□□□ 1.04
Scaf11-201ENSMUST00000047835 Prrc2bQ7TPM1 1486 aaKnown RBP21.56■■□□□ 1.04
Scaf11-201ENSMUST00000047835 Rsph6aQ8CDR2 708 aa21.56■■□□□ 1.04
Scaf11-201ENSMUST00000047835 Tshz3Q8CGV9 1081 aa21.56■■□□□ 1.04
Scaf11-201ENSMUST00000047835 Ccdc39Q9D5Y1 937 aa21.56■■□□□ 1.04
Scaf11-201ENSMUST00000047835 Abcc2Q8VI47 1543 aa21.56■■□□□ 1.04
Scaf11-201ENSMUST00000047835 Pet2A2AHY8 747 aa21.55■■□□□ 1.04
Scaf11-201ENSMUST00000047835 IncenpQ9WU62 880 aa21.55■■□□□ 1.04
Scaf11-201ENSMUST00000047835 PaskQ8CEE6 1383 aa21.55■■□□□ 1.04
Scaf11-201ENSMUST00000047835 Arhgef40Q3UPH7 1517 aa21.55■■□□□ 1.04
Scaf11-201ENSMUST00000047835 Zc3h12cQ5DTV4 884 aa21.55■■□□□ 1.04
Scaf11-201ENSMUST00000047835 Lmbr1lQ9D1E5 489 aa21.55■■□□□ 1.04
Scaf11-201ENSMUST00000047835 Stim1P70302 685 aa21.54■■□□□ 1.04
Scaf11-201ENSMUST00000047835 ZwintQ9CQU5 252 aa21.54■■□□□ 1.04
Scaf11-201ENSMUST00000047835 Cct2P80314 535 aaKnown RBP21.54■■□□□ 1.04
Scaf11-201ENSMUST00000047835 Ppp1r21Q3TDD9 780 aa21.54■■□□□ 1.04
Scaf11-201ENSMUST00000047835 Zbtb21E9Q444 1094 aa21.54■■□□□ 1.04
Scaf11-201ENSMUST00000047835 GckrQ91X44 587 aa21.54■■□□□ 1.04
Scaf11-201ENSMUST00000047835 NefhP19246 1090 aa21.53■■□□□ 1.04
Scaf11-201ENSMUST00000047835 Tbc1d9Q3UYK3 1264 aa21.53■■□□□ 1.04
Scaf11-201ENSMUST00000047835 Gli2Q0VGT2 1544 aa21.53■■□□□ 1.04
Scaf11-201ENSMUST00000047835 Cfap58B2RW38 873 aa21.53■■□□□ 1.04
Scaf11-201ENSMUST00000047835 Ipo4Q8VI75 1082 aa21.53■■□□□ 1.04
Scaf11-201ENSMUST00000047835 Ppfia3P60469 1194 aa21.53■■□□□ 1.04
Scaf11-201ENSMUST00000047835 Igf2bp2Q5SF07 592 aaKnown RBP21.53■■□□□ 1.04
Scaf11-201ENSMUST00000047835 Rbm27Q5SFM8 1060 aaKnown RBP21.53■■□□□ 1.04
Scaf11-201ENSMUST00000047835 Rufy1Q8BIJ7 712 aa21.53■■□□□ 1.04
Scaf11-201ENSMUST00000047835 ParvgQ9ERD8 331 aa21.53■■□□□ 1.04
Scaf11-201ENSMUST00000047835 Hand2Q61039 217 aa21.52■■□□□ 1.04
Scaf11-201ENSMUST00000047835 Znf18Q810A1 556 aa21.52■■□□□ 1.04
Scaf11-201ENSMUST00000047835 Taf7Q9R1C0 341 aa21.52■■□□□ 1.04
Scaf11-201ENSMUST00000047835 Spg7Q3ULF4 781 aa21.51■■□□□ 1.03
Scaf11-201ENSMUST00000047835 Zbtb3Q91X45 518 aa21.51■■□□□ 1.03
Scaf11-201ENSMUST00000047835 Hs1bp3Q3TC93 395 aa21.51■■□□□ 1.03
Scaf11-201ENSMUST00000047835 Q4VA45 678 aa21.51■■□□□ 1.03
Scaf11-201ENSMUST00000047835 Themis2Q91YX0 663 aa21.51■■□□□ 1.03
Scaf11-201ENSMUST00000047835 Lmbr1Q9JIT0 490 aa21.51■■□□□ 1.03
Scaf11-201ENSMUST00000047835 Abcc6Q9R1S7 1498 aa21.51■■□□□ 1.03
Scaf11-201ENSMUST00000047835 Arhgef12Q8R4H2 1543 aaKnown RBP21.51■■□□□ 1.03
Scaf11-201ENSMUST00000047835 Znf697Q569E7 569 aa21.5■■□□□ 1.03
Scaf11-201ENSMUST00000047835 Zbtb22Q9Z0G7 638 aa21.5■■□□□ 1.03
Scaf11-201ENSMUST00000047835 Gas2l3Q3UWW6 683 aa21.5■■□□□ 1.03
Scaf11-201ENSMUST00000047835 Nop14Q8R3N1 860 aaKnown RBP21.5■■□□□ 1.03
Scaf11-201ENSMUST00000047835 RarsQ9D0I9 660 aaKnown RBP21.5■■□□□ 1.03
Retrieved 100 of 22,080 RNA–protein pairs in 48.4 ms