Protein–RNA interactions for Protein: Q9R226

Khdrbs3, KH domain-containing, RNA-binding, signal transduction-associated protein 3, mousemouse

Known RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdrbs3Q9R226 Gm25239-201ENSMUST00000174915 86 ntBASIC32.03■■■□□ 2.72
Khdrbs3Q9R226 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Khdrbs3Q9R226 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Khdrbs3Q9R226 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC29.44■■■□□ 2.3
Khdrbs3Q9R226 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
Khdrbs3Q9R226 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Khdrbs3Q9R226 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Khdrbs3Q9R226 Psd-208ENSMUST00000224556 2034 ntBASIC28.85■■■□□ 2.21
Khdrbs3Q9R226 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Khdrbs3Q9R226 Gm15042-201ENSMUST00000120212 883 ntBASIC28.56■■■□□ 2.16
Khdrbs3Q9R226 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Khdrbs3Q9R226 Gm15045-201ENSMUST00000117359 883 ntBASIC28■■■□□ 2.07
Khdrbs3Q9R226 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.8■■■□□ 2.04
Khdrbs3Q9R226 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Khdrbs3Q9R226 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC27.64■■■□□ 2.02
Khdrbs3Q9R226 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Khdrbs3Q9R226 Gm24109-201ENSMUST00000175489 103 ntBASIC27.47■■□□□ 1.99
Khdrbs3Q9R226 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Khdrbs3Q9R226 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Khdrbs3Q9R226 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Khdrbs3Q9R226 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
Khdrbs3Q9R226 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Khdrbs3Q9R226 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
Khdrbs3Q9R226 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
Khdrbs3Q9R226 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Khdrbs3Q9R226 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Khdrbs3Q9R226 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
Khdrbs3Q9R226 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
Khdrbs3Q9R226 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
Khdrbs3Q9R226 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
Khdrbs3Q9R226 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Khdrbs3Q9R226 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC26.89■■□□□ 1.9
Khdrbs3Q9R226 Gm23366-201ENSMUST00000175022 89 ntBASIC26.86■■□□□ 1.89
Khdrbs3Q9R226 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Khdrbs3Q9R226 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Khdrbs3Q9R226 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Khdrbs3Q9R226 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Khdrbs3Q9R226 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26.65■■□□□ 1.86
Khdrbs3Q9R226 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Khdrbs3Q9R226 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Khdrbs3Q9R226 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Khdrbs3Q9R226 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Khdrbs3Q9R226 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
Khdrbs3Q9R226 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Khdrbs3Q9R226 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Khdrbs3Q9R226 AC153911.1-202ENSMUST00000218534 1034 ntBASIC26.24■■□□□ 1.79
Khdrbs3Q9R226 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26.21■■□□□ 1.79
Khdrbs3Q9R226 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Khdrbs3Q9R226 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Khdrbs3Q9R226 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.16■■□□□ 1.78
Khdrbs3Q9R226 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.15■■□□□ 1.78
Khdrbs3Q9R226 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26.12■■□□□ 1.77
Khdrbs3Q9R226 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Khdrbs3Q9R226 Gm10524-201ENSMUST00000181931 1893 ntBASIC26.02■■□□□ 1.76
Khdrbs3Q9R226 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Khdrbs3Q9R226 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.97■■□□□ 1.75
Khdrbs3Q9R226 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Khdrbs3Q9R226 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Khdrbs3Q9R226 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Khdrbs3Q9R226 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Khdrbs3Q9R226 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC25.7■■□□□ 1.71
Khdrbs3Q9R226 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Khdrbs3Q9R226 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
Khdrbs3Q9R226 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Khdrbs3Q9R226 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Khdrbs3Q9R226 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Khdrbs3Q9R226 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC25.55■■□□□ 1.68
Khdrbs3Q9R226 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Khdrbs3Q9R226 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Khdrbs3Q9R226 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25.42■■□□□ 1.66
Khdrbs3Q9R226 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Khdrbs3Q9R226 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC25.37■■□□□ 1.65
Khdrbs3Q9R226 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Khdrbs3Q9R226 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Khdrbs3Q9R226 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Khdrbs3Q9R226 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
Khdrbs3Q9R226 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Khdrbs3Q9R226 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Khdrbs3Q9R226 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC25.29■■□□□ 1.64
Khdrbs3Q9R226 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
Khdrbs3Q9R226 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Khdrbs3Q9R226 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC25.16■■□□□ 1.62
Khdrbs3Q9R226 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
Khdrbs3Q9R226 Gm27325-201ENSMUST00000175467 74 ntBASIC25.13■■□□□ 1.61
Khdrbs3Q9R226 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Khdrbs3Q9R226 Gm25238-201ENSMUST00000174914 89 ntBASIC25.09■■□□□ 1.61
Khdrbs3Q9R226 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
Khdrbs3Q9R226 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC25.08■■□□□ 1.61
Khdrbs3Q9R226 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC25.05■■□□□ 1.6
Khdrbs3Q9R226 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Khdrbs3Q9R226 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Khdrbs3Q9R226 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Khdrbs3Q9R226 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Khdrbs3Q9R226 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Khdrbs3Q9R226 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Khdrbs3Q9R226 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Khdrbs3Q9R226 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC24.89■■□□□ 1.58
Khdrbs3Q9R226 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Khdrbs3Q9R226 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Khdrbs3Q9R226 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
Retrieved 100 of 76,532 protein–RNA pairs in 7.4 ms