Protein–RNA interactions for Protein: Q921V7

Slc44a3, Choline transporter-like protein 3, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a3Q921V7 Gm25239-201ENSMUST00000174915 86 ntBASIC36.13■■■■□ 3.37
Slc44a3Q921V7 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.92■■■■□ 3.02
Slc44a3Q921V7 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
Slc44a3Q921V7 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
Slc44a3Q921V7 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32.78■■■□□ 2.84
Slc44a3Q921V7 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Slc44a3Q921V7 Gm15042-201ENSMUST00000120212 883 ntBASIC32.13■■■□□ 2.73
Slc44a3Q921V7 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Slc44a3Q921V7 Psd-208ENSMUST00000224556 2034 ntBASIC31.51■■■□□ 2.63
Slc44a3Q921V7 Gm15045-201ENSMUST00000117359 883 ntBASIC31.5■■■□□ 2.63
Slc44a3Q921V7 Gm24109-201ENSMUST00000175489 103 ntBASIC31.05■■■□□ 2.56
Slc44a3Q921V7 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.55
Slc44a3Q921V7 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Slc44a3Q921V7 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.93■■■□□ 2.54
Slc44a3Q921V7 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Slc44a3Q921V7 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
Slc44a3Q921V7 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Slc44a3Q921V7 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
Slc44a3Q921V7 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
Slc44a3Q921V7 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Slc44a3Q921V7 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Slc44a3Q921V7 Gm23366-201ENSMUST00000175022 89 ntBASIC30.27■■■□□ 2.44
Slc44a3Q921V7 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30.26■■■□□ 2.43
Slc44a3Q921V7 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Slc44a3Q921V7 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30.18■■■□□ 2.42
Slc44a3Q921V7 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
Slc44a3Q921V7 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30.11■■■□□ 2.41
Slc44a3Q921V7 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Slc44a3Q921V7 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Slc44a3Q921V7 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Slc44a3Q921V7 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Slc44a3Q921V7 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Slc44a3Q921V7 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.81■■■□□ 2.36
Slc44a3Q921V7 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
Slc44a3Q921V7 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Slc44a3Q921V7 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Slc44a3Q921V7 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC29.53■■■□□ 2.32
Slc44a3Q921V7 AC153911.1-202ENSMUST00000218534 1034 ntBASIC29.49■■■□□ 2.31
Slc44a3Q921V7 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29.38■■■□□ 2.29
Slc44a3Q921V7 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Slc44a3Q921V7 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29.29■■■□□ 2.28
Slc44a3Q921V7 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
Slc44a3Q921V7 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.02■■■□□ 2.24
Slc44a3Q921V7 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Slc44a3Q921V7 Gm10524-201ENSMUST00000181931 1893 ntBASIC29■■■□□ 2.23
Slc44a3Q921V7 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Slc44a3Q921V7 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
Slc44a3Q921V7 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Slc44a3Q921V7 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
Slc44a3Q921V7 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Slc44a3Q921V7 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC28.68■■■□□ 2.18
Slc44a3Q921V7 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.68■■■□□ 2.18
Slc44a3Q921V7 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Slc44a3Q921V7 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Slc44a3Q921V7 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Slc44a3Q921V7 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Slc44a3Q921V7 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
Slc44a3Q921V7 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Slc44a3Q921V7 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Slc44a3Q921V7 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28.39■■■□□ 2.14
Slc44a3Q921V7 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC28.35■■■□□ 2.13
Slc44a3Q921V7 Gm25238-201ENSMUST00000174914 89 ntBASIC28.33■■■□□ 2.13
Slc44a3Q921V7 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28.32■■■□□ 2.12
Slc44a3Q921V7 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
Slc44a3Q921V7 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
Slc44a3Q921V7 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC28.28■■■□□ 2.12
Slc44a3Q921V7 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC28.27■■■□□ 2.12
Slc44a3Q921V7 Gm42596-201ENSMUST00000196305 1958 ntBASIC28.26■■■□□ 2.11
Slc44a3Q921V7 Gm27325-201ENSMUST00000175467 74 ntBASIC28.25■■■□□ 2.11
Slc44a3Q921V7 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC28.23■■■□□ 2.11
Slc44a3Q921V7 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Slc44a3Q921V7 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC28.07■■■□□ 2.08
Slc44a3Q921V7 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC28.04■■■□□ 2.08
Slc44a3Q921V7 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Slc44a3Q921V7 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Slc44a3Q921V7 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Slc44a3Q921V7 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Slc44a3Q921V7 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC27.84■■■□□ 2.05
Slc44a3Q921V7 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Slc44a3Q921V7 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Slc44a3Q921V7 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Slc44a3Q921V7 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Slc44a3Q921V7 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC27.78■■■□□ 2.04
Slc44a3Q921V7 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC27.77■■■□□ 2.04
Slc44a3Q921V7 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Slc44a3Q921V7 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
Slc44a3Q921V7 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Slc44a3Q921V7 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Slc44a3Q921V7 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC27.65■■■□□ 2.02
Slc44a3Q921V7 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC27.64■■■□□ 2.02
Slc44a3Q921V7 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
Slc44a3Q921V7 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC27.58■■■□□ 2.01
Slc44a3Q921V7 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Slc44a3Q921V7 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Slc44a3Q921V7 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Slc44a3Q921V7 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Slc44a3Q921V7 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC27.48■■□□□ 1.99
Slc44a3Q921V7 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Slc44a3Q921V7 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC27.45■■□□□ 1.98
Slc44a3Q921V7 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms