Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Gm25239-201ENSMUST00000174915 86 ntBASIC35.84■■■■□ 3.33
Trim50Q810I2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Trim50Q810I2 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
Trim50Q810I2 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Trim50Q810I2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Trim50Q810I2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.99■■■□□ 2.71
Trim50Q810I2 Gm15042-201ENSMUST00000120212 883 ntBASIC31.75■■■□□ 2.67
Trim50Q810I2 Gm15045-201ENSMUST00000117359 883 ntBASIC31.14■■■□□ 2.58
Trim50Q810I2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Trim50Q810I2 Gm24109-201ENSMUST00000175489 103 ntBASIC30.88■■■□□ 2.53
Trim50Q810I2 Psd-208ENSMUST00000224556 2034 ntBASIC30.71■■■□□ 2.51
Trim50Q810I2 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Trim50Q810I2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.36■■■□□ 2.45
Trim50Q810I2 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
Trim50Q810I2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Trim50Q810I2 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC30.21■■■□□ 2.43
Trim50Q810I2 Gm23366-201ENSMUST00000175022 89 ntBASIC29.98■■■□□ 2.39
Trim50Q810I2 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.87■■■□□ 2.37
Trim50Q810I2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
Trim50Q810I2 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Trim50Q810I2 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Trim50Q810I2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.75■■■□□ 2.35
Trim50Q810I2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.72■■■□□ 2.35
Trim50Q810I2 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.66■■■□□ 2.34
Trim50Q810I2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Trim50Q810I2 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.6■■■□□ 2.33
Trim50Q810I2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Trim50Q810I2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Trim50Q810I2 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Trim50Q810I2 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Trim50Q810I2 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.22■■■□□ 2.27
Trim50Q810I2 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC29.2■■■□□ 2.26
Trim50Q810I2 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Trim50Q810I2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC29.13■■■□□ 2.25
Trim50Q810I2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.11■■■□□ 2.25
Trim50Q810I2 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Trim50Q810I2 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Trim50Q810I2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Trim50Q810I2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
Trim50Q810I2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.69■■■□□ 2.18
Trim50Q810I2 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Trim50Q810I2 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC28.54■■■□□ 2.16
Trim50Q810I2 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.44■■■□□ 2.14
Trim50Q810I2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.42■■■□□ 2.14
Trim50Q810I2 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Trim50Q810I2 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Trim50Q810I2 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Trim50Q810I2 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.31■■■□□ 2.12
Trim50Q810I2 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Trim50Q810I2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC28.22■■■□□ 2.11
Trim50Q810I2 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Trim50Q810I2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Trim50Q810I2 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Trim50Q810I2 Gm25238-201ENSMUST00000174914 89 ntBASIC28.16■■■□□ 2.1
Trim50Q810I2 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Trim50Q810I2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC28.06■■■□□ 2.08
Trim50Q810I2 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Trim50Q810I2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Trim50Q810I2 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Trim50Q810I2 Gm27325-201ENSMUST00000175467 74 ntBASIC27.91■■■□□ 2.06
Trim50Q810I2 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.05
Trim50Q810I2 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.89■■■□□ 2.05
Trim50Q810I2 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
Trim50Q810I2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27.84■■■□□ 2.05
Trim50Q810I2 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Trim50Q810I2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC27.79■■■□□ 2.04
Trim50Q810I2 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27.79■■■□□ 2.04
Trim50Q810I2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.78■■■□□ 2.04
Trim50Q810I2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC27.76■■■□□ 2.03
Trim50Q810I2 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.75■■■□□ 2.03
Trim50Q810I2 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.7■■■□□ 2.03
Trim50Q810I2 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.68■■■□□ 2.02
Trim50Q810I2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC27.63■■■□□ 2.01
Trim50Q810I2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Trim50Q810I2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Trim50Q810I2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Trim50Q810I2 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Trim50Q810I2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC27.35■■□□□ 1.97
Trim50Q810I2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC27.35■■□□□ 1.97
Trim50Q810I2 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.32■■□□□ 1.96
Trim50Q810I2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Trim50Q810I2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Trim50Q810I2 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC27.27■■□□□ 1.96
Trim50Q810I2 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Trim50Q810I2 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Trim50Q810I2 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Trim50Q810I2 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Trim50Q810I2 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Trim50Q810I2 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Trim50Q810I2 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
Trim50Q810I2 Rab21-202ENSMUST00000218831 843 ntBASIC27.11■■□□□ 1.93
Trim50Q810I2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC27.1■■□□□ 1.93
Trim50Q810I2 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Trim50Q810I2 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Trim50Q810I2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Trim50Q810I2 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC27■■□□□ 1.91
Trim50Q810I2 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Trim50Q810I2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26.99■■□□□ 1.91
Trim50Q810I2 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Trim50Q810I2 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms