Protein–RNA interactions for Protein: Q7TQA3

Sdr16c5, Epidermal retinol dehydrogenase 2, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdr16c5Q7TQA3 Gm25239-201ENSMUST00000174915 86 ntBASIC36.86■■■■□ 3.49
Sdr16c5Q7TQA3 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC34.15■■■■□ 3.06
Sdr16c5Q7TQA3 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC33.68■■■□□ 2.98
Sdr16c5Q7TQA3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
Sdr16c5Q7TQA3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Sdr16c5Q7TQA3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32.27■■■□□ 2.76
Sdr16c5Q7TQA3 Gm15042-201ENSMUST00000120212 883 ntBASIC32.1■■■□□ 2.73
Sdr16c5Q7TQA3 Gm24109-201ENSMUST00000175489 103 ntBASIC32■■■□□ 2.71
Sdr16c5Q7TQA3 Gm15045-201ENSMUST00000117359 883 ntBASIC31.31■■■□□ 2.6
Sdr16c5Q7TQA3 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Sdr16c5Q7TQA3 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
Sdr16c5Q7TQA3 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Sdr16c5Q7TQA3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Sdr16c5Q7TQA3 Psd-208ENSMUST00000224556 2034 ntBASIC31.02■■■□□ 2.56
Sdr16c5Q7TQA3 Gm23366-201ENSMUST00000175022 89 ntBASIC30.79■■■□□ 2.52
Sdr16c5Q7TQA3 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Sdr16c5Q7TQA3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
Sdr16c5Q7TQA3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.42■■■□□ 2.46
Sdr16c5Q7TQA3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Sdr16c5Q7TQA3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
Sdr16c5Q7TQA3 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Sdr16c5Q7TQA3 AC153911.1-202ENSMUST00000218534 1034 ntBASIC29.9■■■□□ 2.38
Sdr16c5Q7TQA3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Sdr16c5Q7TQA3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
Sdr16c5Q7TQA3 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.82■■■□□ 2.36
Sdr16c5Q7TQA3 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Sdr16c5Q7TQA3 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.74■■■□□ 2.35
Sdr16c5Q7TQA3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Sdr16c5Q7TQA3 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Sdr16c5Q7TQA3 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC29.66■■■□□ 2.34
Sdr16c5Q7TQA3 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.66■■■□□ 2.34
Sdr16c5Q7TQA3 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC29.64■■■□□ 2.34
Sdr16c5Q7TQA3 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29.63■■■□□ 2.33
Sdr16c5Q7TQA3 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.61■■■□□ 2.33
Sdr16c5Q7TQA3 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Sdr16c5Q7TQA3 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Sdr16c5Q7TQA3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Sdr16c5Q7TQA3 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.32■■■□□ 2.28
Sdr16c5Q7TQA3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
Sdr16c5Q7TQA3 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Sdr16c5Q7TQA3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Sdr16c5Q7TQA3 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Sdr16c5Q7TQA3 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Sdr16c5Q7TQA3 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.17■■■□□ 2.26
Sdr16c5Q7TQA3 Gm25238-201ENSMUST00000174914 89 ntBASIC29.11■■■□□ 2.25
Sdr16c5Q7TQA3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Sdr16c5Q7TQA3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.89■■■□□ 2.21
Sdr16c5Q7TQA3 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Sdr16c5Q7TQA3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.81■■■□□ 2.2
Sdr16c5Q7TQA3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
Sdr16c5Q7TQA3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Sdr16c5Q7TQA3 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28.57■■■□□ 2.16
Sdr16c5Q7TQA3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.57■■■□□ 2.16
Sdr16c5Q7TQA3 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.54■■■□□ 2.16
Sdr16c5Q7TQA3 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Sdr16c5Q7TQA3 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Sdr16c5Q7TQA3 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Sdr16c5Q7TQA3 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Sdr16c5Q7TQA3 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC28.35■■■□□ 2.13
Sdr16c5Q7TQA3 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Sdr16c5Q7TQA3 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Sdr16c5Q7TQA3 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.25■■■□□ 2.11
Sdr16c5Q7TQA3 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Sdr16c5Q7TQA3 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
Sdr16c5Q7TQA3 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28.2■■■□□ 2.1
Sdr16c5Q7TQA3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Sdr16c5Q7TQA3 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Sdr16c5Q7TQA3 Gm27325-201ENSMUST00000175467 74 ntBASIC28.07■■■□□ 2.08
Sdr16c5Q7TQA3 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.04■■■□□ 2.08
Sdr16c5Q7TQA3 Gm25262-201ENSMUST00000174934 133 ntBASIC28.02■■■□□ 2.08
Sdr16c5Q7TQA3 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.95■■■□□ 2.07
Sdr16c5Q7TQA3 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Sdr16c5Q7TQA3 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27.94■■■□□ 2.06
Sdr16c5Q7TQA3 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.85■■■□□ 2.05
Sdr16c5Q7TQA3 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27.84■■■□□ 2.05
Sdr16c5Q7TQA3 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.83■■■□□ 2.05
Sdr16c5Q7TQA3 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.82■■■□□ 2.04
Sdr16c5Q7TQA3 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.79■■■□□ 2.04
Sdr16c5Q7TQA3 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Sdr16c5Q7TQA3 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC27.75■■■□□ 2.03
Sdr16c5Q7TQA3 Rab21-202ENSMUST00000218831 843 ntBASIC27.68■■■□□ 2.02
Sdr16c5Q7TQA3 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.67■■■□□ 2.02
Sdr16c5Q7TQA3 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Sdr16c5Q7TQA3 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27.62■■■□□ 2.01
Sdr16c5Q7TQA3 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Sdr16c5Q7TQA3 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27.55■■■□□ 2
Sdr16c5Q7TQA3 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Sdr16c5Q7TQA3 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Sdr16c5Q7TQA3 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC27.51■■□□□ 1.99
Sdr16c5Q7TQA3 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Sdr16c5Q7TQA3 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Sdr16c5Q7TQA3 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.4■■□□□ 1.98
Sdr16c5Q7TQA3 Gm26115-201ENSMUST00000175605 87 ntBASIC27.38■■□□□ 1.97
Sdr16c5Q7TQA3 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Sdr16c5Q7TQA3 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
Sdr16c5Q7TQA3 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
Sdr16c5Q7TQA3 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Sdr16c5Q7TQA3 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Sdr16c5Q7TQA3 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Sdr16c5Q7TQA3 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms