Protein–RNA interactions for Protein: Q6ZWR6

Syne1, Nesprin-1, mousemouse

Predictions only

Length 8,799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1Q6ZWR6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Syne1Q6ZWR6 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
Syne1Q6ZWR6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Syne1Q6ZWR6 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Syne1Q6ZWR6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Syne1Q6ZWR6 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Syne1Q6ZWR6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC9.52□□□□□ -0.89
Syne1Q6ZWR6 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Syne1Q6ZWR6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Syne1Q6ZWR6 Gm42596-201ENSMUST00000196305 1958 ntBASIC9.5□□□□□ -0.89
Syne1Q6ZWR6 Gm10524-201ENSMUST00000181931 1893 ntBASIC9.5□□□□□ -0.89
Syne1Q6ZWR6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Syne1Q6ZWR6 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC9.49□□□□□ -0.89
Syne1Q6ZWR6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Syne1Q6ZWR6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Syne1Q6ZWR6 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC9.46□□□□□ -0.89
Syne1Q6ZWR6 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Syne1Q6ZWR6 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Syne1Q6ZWR6 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Syne1Q6ZWR6 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Syne1Q6ZWR6 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Syne1Q6ZWR6 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Syne1Q6ZWR6 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Syne1Q6ZWR6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Syne1Q6ZWR6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Syne1Q6ZWR6 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC9.41□□□□□ -0.9
Syne1Q6ZWR6 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Syne1Q6ZWR6 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Syne1Q6ZWR6 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Syne1Q6ZWR6 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC9.4□□□□□ -0.9
Syne1Q6ZWR6 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Syne1Q6ZWR6 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Syne1Q6ZWR6 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Syne1Q6ZWR6 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Syne1Q6ZWR6 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Syne1Q6ZWR6 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC9.39□□□□□ -0.91
Syne1Q6ZWR6 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Syne1Q6ZWR6 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Syne1Q6ZWR6 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Syne1Q6ZWR6 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Syne1Q6ZWR6 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Syne1Q6ZWR6 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Syne1Q6ZWR6 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Syne1Q6ZWR6 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC9.35□□□□□ -0.91
Syne1Q6ZWR6 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Syne1Q6ZWR6 Zfp131-205ENSMUST00000223812 663 ntBASIC9.34□□□□□ -0.91
Syne1Q6ZWR6 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Syne1Q6ZWR6 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Syne1Q6ZWR6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Syne1Q6ZWR6 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Syne1Q6ZWR6 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Syne1Q6ZWR6 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC9.29□□□□□ -0.92
Syne1Q6ZWR6 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Syne1Q6ZWR6 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Syne1Q6ZWR6 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Syne1Q6ZWR6 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC9.28□□□□□ -0.92
Syne1Q6ZWR6 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Syne1Q6ZWR6 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Syne1Q6ZWR6 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Syne1Q6ZWR6 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC9.25□□□□□ -0.93
Syne1Q6ZWR6 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC9.25□□□□□ -0.93
Syne1Q6ZWR6 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Syne1Q6ZWR6 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Syne1Q6ZWR6 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Syne1Q6ZWR6 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Syne1Q6ZWR6 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Syne1Q6ZWR6 AC166822.3-201ENSMUST00000227394 661 ntBASIC9.21□□□□□ -0.93
Syne1Q6ZWR6 AL845457.1-201ENSMUST00000197244 68 ntBASIC9.21□□□□□ -0.93
Syne1Q6ZWR6 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Syne1Q6ZWR6 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Syne1Q6ZWR6 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Syne1Q6ZWR6 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Syne1Q6ZWR6 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Syne1Q6ZWR6 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Syne1Q6ZWR6 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Syne1Q6ZWR6 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Syne1Q6ZWR6 Zfp131-207ENSMUST00000224946 1783 ntBASIC9.18□□□□□ -0.94
Syne1Q6ZWR6 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Syne1Q6ZWR6 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Syne1Q6ZWR6 Tdp2-203ENSMUST00000223804 1136 ntBASIC9.15□□□□□ -0.94
Syne1Q6ZWR6 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC9.15□□□□□ -0.95
Syne1Q6ZWR6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Syne1Q6ZWR6 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC9.13□□□□□ -0.95
Syne1Q6ZWR6 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Syne1Q6ZWR6 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Syne1Q6ZWR6 Gm16148-201ENSMUST00000119653 893 ntBASIC9.13□□□□□ -0.95
Syne1Q6ZWR6 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Syne1Q6ZWR6 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Syne1Q6ZWR6 Peli2-204ENSMUST00000226513 1320 ntBASIC9.12□□□□□ -0.95
Syne1Q6ZWR6 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Syne1Q6ZWR6 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Syne1Q6ZWR6 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Syne1Q6ZWR6 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Syne1Q6ZWR6 Gm45855-201ENSMUST00000212546 880 ntBASIC9.1□□□□□ -0.95
Syne1Q6ZWR6 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC9.1□□□□□ -0.95
Syne1Q6ZWR6 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Syne1Q6ZWR6 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Syne1Q6ZWR6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Syne1Q6ZWR6 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Syne1Q6ZWR6 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms