Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Gm25239-201ENSMUST00000174915 86 ntBASIC34.15■■■■□ 3.06
Ripk1Q60855 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Ripk1Q60855 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Ripk1Q60855 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Ripk1Q60855 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Ripk1Q60855 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.91■■■□□ 2.54
Ripk1Q60855 Gm15042-201ENSMUST00000120212 883 ntBASIC30.36■■■□□ 2.45
Ripk1Q60855 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Ripk1Q60855 Gm15045-201ENSMUST00000117359 883 ntBASIC29.77■■■□□ 2.36
Ripk1Q60855 Psd-208ENSMUST00000224556 2034 ntBASIC29.69■■■□□ 2.34
Ripk1Q60855 Gm24109-201ENSMUST00000175489 103 ntBASIC29.37■■■□□ 2.29
Ripk1Q60855 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Ripk1Q60855 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
Ripk1Q60855 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Ripk1Q60855 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29.2■■■□□ 2.26
Ripk1Q60855 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Ripk1Q60855 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
Ripk1Q60855 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Ripk1Q60855 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Ripk1Q60855 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
Ripk1Q60855 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
Ripk1Q60855 Gm23366-201ENSMUST00000175022 89 ntBASIC28.61■■■□□ 2.17
Ripk1Q60855 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Ripk1Q60855 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Ripk1Q60855 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
Ripk1Q60855 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Ripk1Q60855 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28.47■■■□□ 2.15
Ripk1Q60855 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Ripk1Q60855 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28.45■■■□□ 2.14
Ripk1Q60855 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Ripk1Q60855 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Ripk1Q60855 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Ripk1Q60855 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.14■■■□□ 2.1
Ripk1Q60855 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
Ripk1Q60855 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Ripk1Q60855 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC27.92■■■□□ 2.06
Ripk1Q60855 AC153911.1-202ENSMUST00000218534 1034 ntBASIC27.85■■■□□ 2.05
Ripk1Q60855 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Ripk1Q60855 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.71■■■□□ 2.03
Ripk1Q60855 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.65■■■□□ 2.02
Ripk1Q60855 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Ripk1Q60855 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
Ripk1Q60855 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Ripk1Q60855 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.36■■□□□ 1.97
Ripk1Q60855 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.35■■□□□ 1.97
Ripk1Q60855 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Ripk1Q60855 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Ripk1Q60855 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Ripk1Q60855 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
Ripk1Q60855 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC27.1■■□□□ 1.93
Ripk1Q60855 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Ripk1Q60855 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Ripk1Q60855 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Ripk1Q60855 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Ripk1Q60855 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Ripk1Q60855 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Ripk1Q60855 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Ripk1Q60855 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
Ripk1Q60855 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC26.81■■□□□ 1.88
Ripk1Q60855 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Ripk1Q60855 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.78■■□□□ 1.88
Ripk1Q60855 Gm25238-201ENSMUST00000174914 89 ntBASIC26.78■■□□□ 1.88
Ripk1Q60855 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26.73■■□□□ 1.87
Ripk1Q60855 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC26.73■■□□□ 1.87
Ripk1Q60855 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
Ripk1Q60855 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.71■■□□□ 1.87
Ripk1Q60855 Gm27325-201ENSMUST00000175467 74 ntBASIC26.7■■□□□ 1.86
Ripk1Q60855 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Ripk1Q60855 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.66■■□□□ 1.86
Ripk1Q60855 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.66■■□□□ 1.86
Ripk1Q60855 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Ripk1Q60855 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
Ripk1Q60855 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26.5■■□□□ 1.83
Ripk1Q60855 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ripk1Q60855 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Ripk1Q60855 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.42■■□□□ 1.82
Ripk1Q60855 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Ripk1Q60855 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Ripk1Q60855 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC26.33■■□□□ 1.81
Ripk1Q60855 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ripk1Q60855 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Ripk1Q60855 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ripk1Q60855 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Ripk1Q60855 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Ripk1Q60855 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Ripk1Q60855 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Ripk1Q60855 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
Ripk1Q60855 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
Ripk1Q60855 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Ripk1Q60855 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26.13■■□□□ 1.77
Ripk1Q60855 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Ripk1Q60855 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26.12■■□□□ 1.77
Ripk1Q60855 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.1■■□□□ 1.77
Ripk1Q60855 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Ripk1Q60855 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Ripk1Q60855 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Ripk1Q60855 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Ripk1Q60855 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Ripk1Q60855 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Ripk1Q60855 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms