Protein–RNA interactions for Protein: Q5JCT0

Gcnt3, Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gcnt3Q5JCT0 Gm25239-201ENSMUST00000174915 86 ntBASIC38.59■■■■□ 3.77
Gcnt3Q5JCT0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC35.71■■■■□ 3.31
Gcnt3Q5JCT0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
Gcnt3Q5JCT0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.2
Gcnt3Q5JCT0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.03■■■■□ 3.04
Gcnt3Q5JCT0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33.84■■■■□ 3.01
Gcnt3Q5JCT0 Gm15042-201ENSMUST00000120212 883 ntBASIC33.66■■■□□ 2.98
Gcnt3Q5JCT0 Gm24109-201ENSMUST00000175489 103 ntBASIC33.47■■■□□ 2.95
Gcnt3Q5JCT0 Gm15045-201ENSMUST00000117359 883 ntBASIC32.93■■■□□ 2.86
Gcnt3Q5JCT0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Gcnt3Q5JCT0 Psd-208ENSMUST00000224556 2034 ntBASIC32.63■■■□□ 2.81
Gcnt3Q5JCT0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32.56■■■□□ 2.8
Gcnt3Q5JCT0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Gcnt3Q5JCT0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
Gcnt3Q5JCT0 Gm23366-201ENSMUST00000175022 89 ntBASIC32.18■■■□□ 2.74
Gcnt3Q5JCT0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Gcnt3Q5JCT0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32■■■□□ 2.71
Gcnt3Q5JCT0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31.81■■■□□ 2.68
Gcnt3Q5JCT0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Gcnt3Q5JCT0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Gcnt3Q5JCT0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Gcnt3Q5JCT0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Gcnt3Q5JCT0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Gcnt3Q5JCT0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Gcnt3Q5JCT0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.24■■■□□ 2.59
Gcnt3Q5JCT0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
Gcnt3Q5JCT0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Gcnt3Q5JCT0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
Gcnt3Q5JCT0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Gcnt3Q5JCT0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
Gcnt3Q5JCT0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.05■■■□□ 2.56
Gcnt3Q5JCT0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.05■■■□□ 2.56
Gcnt3Q5JCT0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.01■■■□□ 2.55
Gcnt3Q5JCT0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30.92■■■□□ 2.54
Gcnt3Q5JCT0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.88■■■□□ 2.53
Gcnt3Q5JCT0 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Gcnt3Q5JCT0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Gcnt3Q5JCT0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Gcnt3Q5JCT0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
Gcnt3Q5JCT0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30.62■■■□□ 2.49
Gcnt3Q5JCT0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Gcnt3Q5JCT0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Gcnt3Q5JCT0 Gm25238-201ENSMUST00000174914 89 ntBASIC30.49■■■□□ 2.47
Gcnt3Q5JCT0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Gcnt3Q5JCT0 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Gcnt3Q5JCT0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.41■■■□□ 2.46
Gcnt3Q5JCT0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
Gcnt3Q5JCT0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Gcnt3Q5JCT0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
Gcnt3Q5JCT0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Gcnt3Q5JCT0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.05■■■□□ 2.4
Gcnt3Q5JCT0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.97■■■□□ 2.39
Gcnt3Q5JCT0 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.86■■■□□ 2.37
Gcnt3Q5JCT0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC29.85■■■□□ 2.37
Gcnt3Q5JCT0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Gcnt3Q5JCT0 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.83■■■□□ 2.37
Gcnt3Q5JCT0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
Gcnt3Q5JCT0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Gcnt3Q5JCT0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
Gcnt3Q5JCT0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
Gcnt3Q5JCT0 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.67■■■□□ 2.34
Gcnt3Q5JCT0 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
Gcnt3Q5JCT0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Gcnt3Q5JCT0 Gm27325-201ENSMUST00000175467 74 ntBASIC29.48■■■□□ 2.31
Gcnt3Q5JCT0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Gcnt3Q5JCT0 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.46■■■□□ 2.31
Gcnt3Q5JCT0 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29.44■■■□□ 2.3
Gcnt3Q5JCT0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Gcnt3Q5JCT0 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.31■■■□□ 2.28
Gcnt3Q5JCT0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Gcnt3Q5JCT0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.23■■■□□ 2.27
Gcnt3Q5JCT0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC29.2■■■□□ 2.27
Gcnt3Q5JCT0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Gcnt3Q5JCT0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.26
Gcnt3Q5JCT0 Gm25262-201ENSMUST00000174934 133 ntBASIC29.18■■■□□ 2.26
Gcnt3Q5JCT0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29.17■■■□□ 2.26
Gcnt3Q5JCT0 Gm42596-201ENSMUST00000196305 1958 ntBASIC29.1■■■□□ 2.25
Gcnt3Q5JCT0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.07■■■□□ 2.24
Gcnt3Q5JCT0 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Gcnt3Q5JCT0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.05■■■□□ 2.24
Gcnt3Q5JCT0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.05■■■□□ 2.24
Gcnt3Q5JCT0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.05■■■□□ 2.24
Gcnt3Q5JCT0 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Gcnt3Q5JCT0 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Gcnt3Q5JCT0 Rab21-202ENSMUST00000218831 843 ntBASIC28.97■■■□□ 2.23
Gcnt3Q5JCT0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
Gcnt3Q5JCT0 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.89■■■□□ 2.22
Gcnt3Q5JCT0 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC28.78■■■□□ 2.2
Gcnt3Q5JCT0 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Gcnt3Q5JCT0 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
Gcnt3Q5JCT0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC28.72■■■□□ 2.19
Gcnt3Q5JCT0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
Gcnt3Q5JCT0 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.68■■■□□ 2.18
Gcnt3Q5JCT0 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC28.68■■■□□ 2.18
Gcnt3Q5JCT0 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Gcnt3Q5JCT0 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.65■■■□□ 2.18
Gcnt3Q5JCT0 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.65■■■□□ 2.18
Gcnt3Q5JCT0 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Gcnt3Q5JCT0 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Gcnt3Q5JCT0 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28.64■■■□□ 2.18
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms