Protein–RNA interactions for Protein: Q04545

TDA9, Probable transcription factor TDA9, yeastyeast

Predictions only

Length 1,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA9Q04545 RKM5YLR137W 1104 nt12.98□□□□□ -0.33
TDA9Q04545 SDH1YKL148C 1923 nt12.92□□□□□ -0.34
TDA9Q04545 IRC15YPL017C 1500 nt12.91□□□□□ -0.34
TDA9Q04545 ART5YGR068C 1761 nt12.91□□□□□ -0.34
TDA9Q04545 TAT1YBR069C 1860 nt12.89□□□□□ -0.35
TDA9Q04545 GFD2YCL036W 1701 nt12.88□□□□□ -0.35
TDA9Q04545 RTS2YOR077W 699 nt12.82□□□□□ -0.36
TDA9Q04545 GIS3YLR094C 1509 nt12.82□□□□□ -0.36
TDA9Q04545 SCC4YER147C 1875 nt12.8□□□□□ -0.36
TDA9Q04545 TIR4YOR009W 1464 nt12.8□□□□□ -0.36
TDA9Q04545 PET9YBL030C 957 nt12.76□□□□□ -0.37
TDA9Q04545 NPL3YDR432W 1245 nt12.69□□□□□ -0.38
TDA9Q04545 YMR057CYMR057C 372 nt12.69□□□□□ -0.38
TDA9Q04545 YOL037CYOL037C 354 nt12.68□□□□□ -0.38
TDA9Q04545 YOR139CYOR139C 393 nt12.68□□□□□ -0.38
TDA9Q04545 YCH1YGR203W 447 nt12.67□□□□□ -0.38
TDA9Q04545 YLR154C-GYLR154C-G 150 nt12.63□□□□□ -0.39
TDA9Q04545 MOT3YMR070W 1473 nt12.63□□□□□ -0.39
TDA9Q04545 CUE1YMR264W 612 nt12.62□□□□□ -0.39
TDA9Q04545 YJL152WYJL152W 360 nt12.61□□□□□ -0.39
TDA9Q04545 FPS1YLL043W 2010 nt12.55□□□□□ -0.4
TDA9Q04545 YSC84YHR016C 1407 nt12.55□□□□□ -0.4
TDA9Q04545 PCH2YBR186W 1695 nt12.53□□□□□ -0.4
TDA9Q04545 SEC11YIR022W 504 nt12.5□□□□□ -0.41
TDA9Q04545 RRT12YCR045C 1476 nt12.48□□□□□ -0.41
TDA9Q04545 YHL050CYHL050C 2094 nt12.48□□□□□ -0.41
TDA9Q04545 GUT2YIL155C 1950 nt12.48□□□□□ -0.41
TDA9Q04545 WHI5YOR083W 888 nt12.47□□□□□ -0.41
TDA9Q04545 YIL100WYIL100W 354 nt12.46□□□□□ -0.41
TDA9Q04545 YLR281CYLR281C 468 nt12.44□□□□□ -0.42
TDA9Q04545 YCL048W-AYCL048W-A 240 nt12.44□□□□□ -0.42
TDA9Q04545 YLR236CYLR236C 324 nt12.41□□□□□ -0.42
TDA9Q04545 YNL195CYNL195C 786 nt12.37□□□□□ -0.43
TDA9Q04545 PIB2YGL023C 1908 nt12.31□□□□□ -0.44
TDA9Q04545 IDH1YNL037C 1083 nt12.26□□□□□ -0.45
TDA9Q04545 PUS2YGL063W 1113 nt12.25□□□□□ -0.45
TDA9Q04545 GBP2YCL011C 1284 nt12.23□□□□□ -0.45
TDA9Q04545 RTF1YGL244W 1677 nt12.22□□□□□ -0.45
TDA9Q04545 RRD1YIL153W 1182 nt12.22□□□□□ -0.45
TDA9Q04545 tM(CAU)CtM(CAU)C 72 nt12.2□□□□□ -0.46
TDA9Q04545 IMT4tM(CAU)E 72 nt12.2□□□□□ -0.46
TDA9Q04545 IMT3tM(CAU)J3 72 nt12.2□□□□□ -0.46
TDA9Q04545 IMT1tM(CAU)O1 72 nt12.2□□□□□ -0.46
TDA9Q04545 IMT2tM(CAU)P 72 nt12.2□□□□□ -0.46
TDA9Q04545 YPR011CYPR011C 981 nt12.17□□□□□ -0.46
TDA9Q04545 DSK2YMR276W 1122 nt12.16□□□□□ -0.46
TDA9Q04545 DED1YOR204W 1815 nt12.16□□□□□ -0.46
TDA9Q04545 BOP3YNL042W 1191 nt12.15□□□□□ -0.46
TDA9Q04545 TCD2YKL027W 1344 nt12.11□□□□□ -0.47
TDA9Q04545 IMP2'YIL154C 1041 nt12.1□□□□□ -0.47
TDA9Q04545 NCP1YHR042W 2076 nt12.09□□□□□ -0.47
TDA9Q04545 FMT1YBL013W 1206 nt12.09□□□□□ -0.47
TDA9Q04545 YDR433WYDR433W 441 nt12.08□□□□□ -0.48
TDA9Q04545 MXR2YCL033C 507 nt12.08□□□□□ -0.48
TDA9Q04545 PAC11YDR488C 1602 nt12.07□□□□□ -0.48
TDA9Q04545 PTK1YKL198C 1989 nt12.07□□□□□ -0.48
TDA9Q04545 LCB1YMR296C 1677 nt12.06□□□□□ -0.48
TDA9Q04545 FMP45YDL222C 930 nt12.04□□□□□ -0.48
TDA9Q04545 FMP52YER004W 696 nt12.03□□□□□ -0.48
TDA9Q04545 PCM1YEL058W 1674 nt12□□□□□ -0.49
TDA9Q04545 LPX1YOR084W 1164 nt12□□□□□ -0.49
TDA9Q04545 ADH2YMR303C 1047 nt11.98□□□□□ -0.49
TDA9Q04545 CWP1YKL096W 720 nt11.97□□□□□ -0.49
TDA9Q04545 ERV46YAL042W 1248 nt11.94□□□□□ -0.5
TDA9Q04545 SIM1YIL123W 1431 nt11.93□□□□□ -0.5
TDA9Q04545 SNF6YHL025W 999 nt11.89□□□□□ -0.51
TDA9Q04545 YKR040CYKR040C 504 nt11.89□□□□□ -0.51
TDA9Q04545 SOR2YDL246C 1074 nt11.88□□□□□ -0.51
TDA9Q04545 SOR1YJR159W 1074 nt11.88□□□□□ -0.51
TDA9Q04545 BIO4YNR057C 714 nt11.86□□□□□ -0.51
TDA9Q04545 YCL042WYCL042W 360 nt11.85□□□□□ -0.51
TDA9Q04545 FRD1YEL047C 1413 nt11.85□□□□□ -0.51
TDA9Q04545 YFL054CYFL054C 1941 nt11.84□□□□□ -0.51
TDA9Q04545 LYS4YDR234W 2082 nt11.79□□□□□ -0.52
TDA9Q04545 YIH1YCR059C 777 nt11.74□□□□□ -0.53
TDA9Q04545 SPT8YLR055C 1809 nt11.73□□□□□ -0.53
TDA9Q04545 YLL053CYLL053C 459 nt11.7□□□□□ -0.54
TDA9Q04545 SPP1YPL138C 1062 nt11.69□□□□□ -0.54
TDA9Q04545 RNQ1YCL028W 1218 nt11.69□□□□□ -0.54
TDA9Q04545 CRR1YLR213C 1269 nt11.65□□□□□ -0.54
TDA9Q04545 ERF2YLR246W 1080 nt11.65□□□□□ -0.54
TDA9Q04545 DIC1YLR348C 897 nt11.64□□□□□ -0.55
TDA9Q04545 PTH1YHR189W 573 nt11.61□□□□□ -0.55
TDA9Q04545 ATF2YGR177C 1608 nt11.6□□□□□ -0.55
TDA9Q04545 MIC10YCL057C-A 294 nt11.58□□□□□ -0.56
TDA9Q04545 SWE1YJL187C 2460 nt11.57□□□□□ -0.56
TDA9Q04545 FTR1YER145C 1215 nt11.57□□□□□ -0.56
TDA9Q04545 TRM5YHR070W 1500 nt11.55□□□□□ -0.56
TDA9Q04545 GAL1YBR020W 1587 nt11.54□□□□□ -0.56
TDA9Q04545 HEM12YDR047W 1089 nt11.53□□□□□ -0.56
TDA9Q04545 SNG1YGR197C 1644 nt11.51□□□□□ -0.57
TDA9Q04545 YHR056W-AYHR056W-A 435 nt11.5□□□□□ -0.57
TDA9Q04545 YFL067WYFL067W 528 nt11.49□□□□□ -0.57
TDA9Q04545 YLR235CYLR235C 399 nt11.47□□□□□ -0.57
TDA9Q04545 DDR2YOL052C-A 186 nt11.47□□□□□ -0.57
TDA9Q04545 NVJ2YPR091C 2313 nt11.46□□□□□ -0.57
TDA9Q04545 TIM23YNR017W 669 nt11.45□□□□□ -0.58
TDA9Q04545 YLR179CYLR179C 606 nt11.42□□□□□ -0.58
TDA9Q04545 YDL086C-AYDL086C-A 435 nt11.41□□□□□ -0.58
TDA9Q04545 RAX1YOR301W 1308 nt11.39□□□□□ -0.59
Retrieved 100 of 7,029 protein–RNA pairs in 15.5 ms