Protein–RNA interactions for Protein: O88335

Kcnj1, ATP-sensitive inward rectifier potassium channel 1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnj1O88335 Gm25239-201ENSMUST00000174915 86 ntBASIC31.74■■■□□ 2.67
Kcnj1O88335 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Kcnj1O88335 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Kcnj1O88335 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Kcnj1O88335 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
Kcnj1O88335 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC29.09■■■□□ 2.25
Kcnj1O88335 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Kcnj1O88335 Psd-208ENSMUST00000224556 2034 ntBASIC28.77■■■□□ 2.2
Kcnj1O88335 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Kcnj1O88335 Gm15042-201ENSMUST00000120212 883 ntBASIC28.15■■■□□ 2.1
Kcnj1O88335 Gm15045-201ENSMUST00000117359 883 ntBASIC27.57■■■□□ 2
Kcnj1O88335 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
Kcnj1O88335 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Kcnj1O88335 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Kcnj1O88335 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Kcnj1O88335 Gm24109-201ENSMUST00000175489 103 ntBASIC27.29■■□□□ 1.96
Kcnj1O88335 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
Kcnj1O88335 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
Kcnj1O88335 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Kcnj1O88335 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Kcnj1O88335 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Kcnj1O88335 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27■■□□□ 1.91
Kcnj1O88335 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Kcnj1O88335 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Kcnj1O88335 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC26.9■■□□□ 1.9
Kcnj1O88335 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Kcnj1O88335 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
Kcnj1O88335 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Kcnj1O88335 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Kcnj1O88335 Gm23366-201ENSMUST00000175022 89 ntBASIC26.6■■□□□ 1.85
Kcnj1O88335 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Kcnj1O88335 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Kcnj1O88335 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Kcnj1O88335 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Kcnj1O88335 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Kcnj1O88335 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Kcnj1O88335 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.37■■□□□ 1.81
Kcnj1O88335 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Kcnj1O88335 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Kcnj1O88335 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
Kcnj1O88335 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Kcnj1O88335 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC26.22■■□□□ 1.79
Kcnj1O88335 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Kcnj1O88335 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.17■■□□□ 1.78
Kcnj1O88335 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Kcnj1O88335 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Kcnj1O88335 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
Kcnj1O88335 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
Kcnj1O88335 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC25.93■■□□□ 1.74
Kcnj1O88335 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Kcnj1O88335 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC25.85■■□□□ 1.73
Kcnj1O88335 AC153911.1-202ENSMUST00000218534 1034 ntBASIC25.85■■□□□ 1.73
Kcnj1O88335 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC25.82■■□□□ 1.72
Kcnj1O88335 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Kcnj1O88335 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
Kcnj1O88335 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
Kcnj1O88335 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Kcnj1O88335 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC25.49■■□□□ 1.67
Kcnj1O88335 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
Kcnj1O88335 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Kcnj1O88335 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
Kcnj1O88335 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Kcnj1O88335 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
Kcnj1O88335 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Kcnj1O88335 Gm10524-201ENSMUST00000181931 1893 ntBASIC25.22■■□□□ 1.63
Kcnj1O88335 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC25.22■■□□□ 1.63
Kcnj1O88335 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Kcnj1O88335 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Kcnj1O88335 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Kcnj1O88335 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Kcnj1O88335 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
Kcnj1O88335 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Kcnj1O88335 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Kcnj1O88335 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25.03■■□□□ 1.6
Kcnj1O88335 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Kcnj1O88335 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC24.99■■□□□ 1.59
Kcnj1O88335 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24.99■■□□□ 1.59
Kcnj1O88335 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Kcnj1O88335 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Kcnj1O88335 Gm25238-201ENSMUST00000174914 89 ntBASIC24.91■■□□□ 1.58
Kcnj1O88335 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC24.9■■□□□ 1.58
Kcnj1O88335 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Kcnj1O88335 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Kcnj1O88335 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Kcnj1O88335 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
Kcnj1O88335 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
Kcnj1O88335 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC24.84■■□□□ 1.57
Kcnj1O88335 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Kcnj1O88335 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Kcnj1O88335 Gm27325-201ENSMUST00000175467 74 ntBASIC24.75■■□□□ 1.55
Kcnj1O88335 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Kcnj1O88335 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Kcnj1O88335 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Kcnj1O88335 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Kcnj1O88335 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24.69■■□□□ 1.54
Kcnj1O88335 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
Kcnj1O88335 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC24.67■■□□□ 1.54
Kcnj1O88335 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Kcnj1O88335 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
Kcnj1O88335 CT025624.2-201ENSMUST00000223609 1909 ntBASIC24.66■■□□□ 1.54
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms