Protein–RNA interactions for Protein: O08604

Raet1c, Retinoic acid early-inducible protein 1-gamma, mousemouse

Predictions only

Length 253 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1cO08604 Gm25239-201ENSMUST00000174915 86 ntBASIC32.5■■■□□ 2.79
Raet1cO08604 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
Raet1cO08604 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
Raet1cO08604 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Raet1cO08604 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Raet1cO08604 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC29.4■■■□□ 2.3
Raet1cO08604 Gm15042-201ENSMUST00000120212 883 ntBASIC28.86■■■□□ 2.21
Raet1cO08604 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Raet1cO08604 Gm15045-201ENSMUST00000117359 883 ntBASIC28.31■■■□□ 2.12
Raet1cO08604 Psd-208ENSMUST00000224556 2034 ntBASIC28.28■■■□□ 2.12
Raet1cO08604 Gm24109-201ENSMUST00000175489 103 ntBASIC27.94■■■□□ 2.06
Raet1cO08604 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.04
Raet1cO08604 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Raet1cO08604 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC27.77■■■□□ 2.04
Raet1cO08604 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Raet1cO08604 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Raet1cO08604 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
Raet1cO08604 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Raet1cO08604 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
Raet1cO08604 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Raet1cO08604 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
Raet1cO08604 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Raet1cO08604 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Raet1cO08604 Gm23366-201ENSMUST00000175022 89 ntBASIC27.2■■□□□ 1.94
Raet1cO08604 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
Raet1cO08604 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
Raet1cO08604 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Raet1cO08604 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Raet1cO08604 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Raet1cO08604 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27.03■■□□□ 1.92
Raet1cO08604 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Raet1cO08604 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Raet1cO08604 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26.74■■□□□ 1.87
Raet1cO08604 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
Raet1cO08604 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Raet1cO08604 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
Raet1cO08604 AC153911.1-202ENSMUST00000218534 1034 ntBASIC26.51■■□□□ 1.83
Raet1cO08604 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Raet1cO08604 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Raet1cO08604 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Raet1cO08604 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Raet1cO08604 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26.27■■□□□ 1.8
Raet1cO08604 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Raet1cO08604 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Raet1cO08604 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26.04■■□□□ 1.76
Raet1cO08604 Gm10524-201ENSMUST00000181931 1893 ntBASIC26■■□□□ 1.75
Raet1cO08604 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Raet1cO08604 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Raet1cO08604 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
Raet1cO08604 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Raet1cO08604 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC25.83■■□□□ 1.73
Raet1cO08604 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Raet1cO08604 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Raet1cO08604 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Raet1cO08604 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Raet1cO08604 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Raet1cO08604 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC25.53■■□□□ 1.68
Raet1cO08604 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Raet1cO08604 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.68
Raet1cO08604 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Raet1cO08604 Gm25238-201ENSMUST00000174914 89 ntBASIC25.5■■□□□ 1.67
Raet1cO08604 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25.49■■□□□ 1.67
Raet1cO08604 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC25.42■■□□□ 1.66
Raet1cO08604 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC25.41■■□□□ 1.66
Raet1cO08604 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
Raet1cO08604 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.66
Raet1cO08604 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.66
Raet1cO08604 Gm27325-201ENSMUST00000175467 74 ntBASIC25.38■■□□□ 1.65
Raet1cO08604 Gm42596-201ENSMUST00000196305 1958 ntBASIC25.37■■□□□ 1.65
Raet1cO08604 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC25.36■■□□□ 1.65
Raet1cO08604 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Raet1cO08604 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25.24■■□□□ 1.63
Raet1cO08604 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC25.2■■□□□ 1.62
Raet1cO08604 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Raet1cO08604 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Raet1cO08604 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Raet1cO08604 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Raet1cO08604 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Raet1cO08604 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Raet1cO08604 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC25.02■■□□□ 1.6
Raet1cO08604 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
Raet1cO08604 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Raet1cO08604 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Raet1cO08604 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.59
Raet1cO08604 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Raet1cO08604 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
Raet1cO08604 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Raet1cO08604 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Raet1cO08604 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Raet1cO08604 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Raet1cO08604 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Raet1cO08604 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC24.84■■□□□ 1.57
Raet1cO08604 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Raet1cO08604 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC24.84■■□□□ 1.57
Raet1cO08604 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Raet1cO08604 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC24.79■■□□□ 1.56
Raet1cO08604 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Raet1cO08604 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Raet1cO08604 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Raet1cO08604 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms