Protein–RNA interactions for Protein: A1L3P4

Slc9a6, Sodium/hydrogen exchanger, mousemouse

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc9a6A1L3P4 Gm25239-201ENSMUST00000174915 86 ntBASIC34.02■■■■□ 3.04
Slc9a6A1L3P4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Slc9a6A1L3P4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Slc9a6A1L3P4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Slc9a6A1L3P4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Slc9a6A1L3P4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.76■■■□□ 2.51
Slc9a6A1L3P4 Gm15042-201ENSMUST00000120212 883 ntBASIC30.21■■■□□ 2.43
Slc9a6A1L3P4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Slc9a6A1L3P4 Gm15045-201ENSMUST00000117359 883 ntBASIC29.59■■■□□ 2.33
Slc9a6A1L3P4 Psd-208ENSMUST00000224556 2034 ntBASIC29.56■■■□□ 2.32
Slc9a6A1L3P4 Gm24109-201ENSMUST00000175489 103 ntBASIC29.23■■■□□ 2.27
Slc9a6A1L3P4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Slc9a6A1L3P4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.11■■■□□ 2.25
Slc9a6A1L3P4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29.05■■■□□ 2.24
Slc9a6A1L3P4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Slc9a6A1L3P4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
Slc9a6A1L3P4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Slc9a6A1L3P4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Slc9a6A1L3P4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.52■■■□□ 2.16
Slc9a6A1L3P4 Gm23366-201ENSMUST00000175022 89 ntBASIC28.49■■■□□ 2.15
Slc9a6A1L3P4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Slc9a6A1L3P4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
Slc9a6A1L3P4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Slc9a6A1L3P4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
Slc9a6A1L3P4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
Slc9a6A1L3P4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28.38■■■□□ 2.13
Slc9a6A1L3P4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Slc9a6A1L3P4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Slc9a6A1L3P4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28.25■■■□□ 2.11
Slc9a6A1L3P4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Slc9a6A1L3P4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Slc9a6A1L3P4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Slc9a6A1L3P4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.97■■■□□ 2.07
Slc9a6A1L3P4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27.93■■■□□ 2.06
Slc9a6A1L3P4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Slc9a6A1L3P4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC27.79■■■□□ 2.04
Slc9a6A1L3P4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC27.77■■■□□ 2.04
Slc9a6A1L3P4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Slc9a6A1L3P4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.59■■■□□ 2.01
Slc9a6A1L3P4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Slc9a6A1L3P4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
Slc9a6A1L3P4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.47■■□□□ 1.99
Slc9a6A1L3P4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Slc9a6A1L3P4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.23■■□□□ 1.95
Slc9a6A1L3P4 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.21■■□□□ 1.95
Slc9a6A1L3P4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Slc9a6A1L3P4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Slc9a6A1L3P4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Slc9a6A1L3P4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC27.04■■□□□ 1.92
Slc9a6A1L3P4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
Slc9a6A1L3P4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Slc9a6A1L3P4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Slc9a6A1L3P4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Slc9a6A1L3P4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Slc9a6A1L3P4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Slc9a6A1L3P4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Slc9a6A1L3P4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC26.75■■□□□ 1.87
Slc9a6A1L3P4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Slc9a6A1L3P4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Slc9a6A1L3P4 Gm25238-201ENSMUST00000174914 89 ntBASIC26.68■■□□□ 1.86
Slc9a6A1L3P4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.68■■□□□ 1.86
Slc9a6A1L3P4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Slc9a6A1L3P4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC26.63■■□□□ 1.85
Slc9a6A1L3P4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
Slc9a6A1L3P4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26.57■■□□□ 1.84
Slc9a6A1L3P4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
Slc9a6A1L3P4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Slc9a6A1L3P4 Gm27325-201ENSMUST00000175467 74 ntBASIC26.55■■□□□ 1.84
Slc9a6A1L3P4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.55■■□□□ 1.84
Slc9a6A1L3P4 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.53■■□□□ 1.84
Slc9a6A1L3P4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Slc9a6A1L3P4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.44■■□□□ 1.82
Slc9a6A1L3P4 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Slc9a6A1L3P4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26.38■■□□□ 1.81
Slc9a6A1L3P4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Slc9a6A1L3P4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Slc9a6A1L3P4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Slc9a6A1L3P4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Slc9a6A1L3P4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
Slc9a6A1L3P4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
Slc9a6A1L3P4 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Slc9a6A1L3P4 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Slc9a6A1L3P4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
Slc9a6A1L3P4 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Slc9a6A1L3P4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Slc9a6A1L3P4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Slc9a6A1L3P4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26.02■■□□□ 1.76
Slc9a6A1L3P4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Slc9a6A1L3P4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Slc9a6A1L3P4 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Slc9a6A1L3P4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC25.97■■□□□ 1.75
Slc9a6A1L3P4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Slc9a6A1L3P4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC25.94■■□□□ 1.74
Slc9a6A1L3P4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Slc9a6A1L3P4 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Slc9a6A1L3P4 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Slc9a6A1L3P4 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Slc9a6A1L3P4 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Slc9a6A1L3P4 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
Slc9a6A1L3P4 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms