Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNAP47Q5SQN1 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.26■□□□□ 0.51
SNAP47Q5SQN1 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
SNAP47Q5SQN1 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNAP47Q5SQN1 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.26■□□□□ 0.51
SNAP47Q5SQN1 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNAP47Q5SQN1 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNAP47Q5SQN1 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SNAP47Q5SQN1 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SNAP47Q5SQN1 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNAP47Q5SQN1 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNAP47Q5SQN1 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNAP47Q5SQN1 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.25■□□□□ 0.51
SNAP47Q5SQN1 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNAP47Q5SQN1 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
SNAP47Q5SQN1 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNAP47Q5SQN1 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SNAP47Q5SQN1 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNAP47Q5SQN1 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
SNAP47Q5SQN1 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.25■□□□□ 0.51
SNAP47Q5SQN1 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SNAP47Q5SQN1 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNAP47Q5SQN1 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.25■□□□□ 0.51
SNAP47Q5SQN1 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.25■□□□□ 0.51
SNAP47Q5SQN1 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNAP47Q5SQN1 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNAP47Q5SQN1 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SNAP47Q5SQN1 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNAP47Q5SQN1 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.25■□□□□ 0.51
SNAP47Q5SQN1 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.25■□□□□ 0.51
SNAP47Q5SQN1 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNAP47Q5SQN1 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNAP47Q5SQN1 UPK3BP1-201ENST00000428678 509 ntBASIC18.25■□□□□ 0.51
SNAP47Q5SQN1 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNAP47Q5SQN1 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.25■□□□□ 0.51
SNAP47Q5SQN1 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.25■□□□□ 0.51
SNAP47Q5SQN1 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.25■□□□□ 0.51
SNAP47Q5SQN1 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SNAP47Q5SQN1 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.25■□□□□ 0.51
SNAP47Q5SQN1 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.25■□□□□ 0.51
SNAP47Q5SQN1 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.25■□□□□ 0.51
SNAP47Q5SQN1 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.25■□□□□ 0.51
SNAP47Q5SQN1 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNAP47Q5SQN1 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.25■□□□□ 0.51
SNAP47Q5SQN1 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SNAP47Q5SQN1 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SNAP47Q5SQN1 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SNAP47Q5SQN1 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNAP47Q5SQN1 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SNAP47Q5SQN1 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.25■□□□□ 0.51
SNAP47Q5SQN1 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNAP47Q5SQN1 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNAP47Q5SQN1 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SNAP47Q5SQN1 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SNAP47Q5SQN1 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.24■□□□□ 0.51
SNAP47Q5SQN1 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SNAP47Q5SQN1 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SNAP47Q5SQN1 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.24■□□□□ 0.51
SNAP47Q5SQN1 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SNAP47Q5SQN1 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SNAP47Q5SQN1 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SNAP47Q5SQN1 TSPY21P-201ENST00000433481 731 ntBASIC18.24■□□□□ 0.51
SNAP47Q5SQN1 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.24■□□□□ 0.51
SNAP47Q5SQN1 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SNAP47Q5SQN1 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.24■□□□□ 0.51
SNAP47Q5SQN1 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.24■□□□□ 0.51
SNAP47Q5SQN1 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.24■□□□□ 0.51
SNAP47Q5SQN1 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.24■□□□□ 0.51
SNAP47Q5SQN1 MIR4674-201ENST00000582457 87 ntBASIC18.24■□□□□ 0.51
SNAP47Q5SQN1 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
SNAP47Q5SQN1 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.24■□□□□ 0.51
SNAP47Q5SQN1 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.24■□□□□ 0.51
SNAP47Q5SQN1 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.24■□□□□ 0.51
SNAP47Q5SQN1 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SNAP47Q5SQN1 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SNAP47Q5SQN1 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
SNAP47Q5SQN1 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNAP47Q5SQN1 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNAP47Q5SQN1 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNAP47Q5SQN1 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.23■□□□□ 0.51
SNAP47Q5SQN1 AC018445.3-201ENST00000624177 1945 ntBASIC18.23■□□□□ 0.51
SNAP47Q5SQN1 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SNAP47Q5SQN1 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SNAP47Q5SQN1 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNAP47Q5SQN1 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SNAP47Q5SQN1 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.23■□□□□ 0.51
SNAP47Q5SQN1 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.23■□□□□ 0.51
SNAP47Q5SQN1 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SNAP47Q5SQN1 HOMER2P1-201ENST00000455653 964 ntBASIC18.23■□□□□ 0.51
SNAP47Q5SQN1 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.23■□□□□ 0.51
SNAP47Q5SQN1 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SNAP47Q5SQN1 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.23■□□□□ 0.51
SNAP47Q5SQN1 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.23■□□□□ 0.51
SNAP47Q5SQN1 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.23■□□□□ 0.51
SNAP47Q5SQN1 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SNAP47Q5SQN1 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
SNAP47Q5SQN1 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.23■□□□□ 0.51
SNAP47Q5SQN1 AC091076.1-201ENST00000610741 619 ntBASIC18.23■□□□□ 0.51
SNAP47Q5SQN1 MYC-208ENST00000641036 567 ntBASIC18.23■□□□□ 0.51
SNAP47Q5SQN1 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms