Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 RNU6-59P-201ENST00000384787 107 ntBASIC-6.01□□□□□ -3.37
SCAPERQ9BY12 AC110620.1-201ENST00000416042 228 ntBASIC-6.01□□□□□ -3.37
SCAPERQ9BY12 U6.111-201ENST00000636093 83 ntBASIC-6.01□□□□□ -3.37
SCAPERQ9BY12 Y_RNA.464-201ENST00000384282 110 ntBASIC-6.03□□□□□ -3.37
SCAPERQ9BY12 RNU6-1212P-201ENST00000517023 104 ntBASIC-6.03□□□□□ -3.37
SCAPERQ9BY12 RNU6-620P-201ENST00000384017 96 ntBASIC-6.06□□□□□ -3.38
SCAPERQ9BY12 RNU6-871P-201ENST00000516122 100 ntBASIC-6.07□□□□□ -3.38
SCAPERQ9BY12 RNU6-539P-201ENST00000516665 103 ntBASIC-6.07□□□□□ -3.38
SCAPERQ9BY12 RNU6-388P-201ENST00000517012 105 ntBASIC-6.07□□□□□ -3.38
SCAPERQ9BY12 RNU6-389P-201ENST00000517048 105 ntBASIC-6.07□□□□□ -3.38
SCAPERQ9BY12 RNU6-640P-201ENST00000363693 105 ntBASIC-6.08□□□□□ -3.38
SCAPERQ9BY12 Y_RNA.545-201ENST00000384652 105 ntBASIC-6.08□□□□□ -3.38
SCAPERQ9BY12 AC008267.6-201ENST00000441664 139 ntBASIC-6.08□□□□□ -3.38
SCAPERQ9BY12 AC114801.3-201ENST00000510231 177 ntBASIC-6.12□□□□□ -3.39
SCAPERQ9BY12 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-6.12□□□□□ -3.39
SCAPERQ9BY12 SNORD113-1-201ENST00000365321 69 ntBASIC-6.13□□□□□ -3.39
SCAPERQ9BY12 RNU6-242P-201ENST00000384359 107 ntBASIC-6.15□□□□□ -3.39
SCAPERQ9BY12 MIR4666B-201ENST00000578142 81 ntBASIC-6.15□□□□□ -3.39
SCAPERQ9BY12 RNU6-446P-201ENST00000362827 106 ntBASIC-6.16□□□□□ -3.39
SCAPERQ9BY12 RNU6-986P-201ENST00000363133 102 ntBASIC-6.16□□□□□ -3.4
SCAPERQ9BY12 RNU6-32P-201ENST00000383948 107 ntBASIC-6.19□□□□□ -3.4
SCAPERQ9BY12 RNU6-13P-201ENST00000384248 107 ntBASIC-6.19□□□□□ -3.4
SCAPERQ9BY12 RNU6-12P-201ENST00000384604 107 ntBASIC-6.19□□□□□ -3.4
SCAPERQ9BY12 RNU6-41P-201ENST00000384741 107 ntBASIC-6.19□□□□□ -3.4
SCAPERQ9BY12 RNU6-1276P-201ENST00000365372 104 ntBASIC-6.21□□□□□ -3.4
SCAPERQ9BY12 MIR494-201ENST00000349529 81 ntBASIC-6.22□□□□□ -3.4
SCAPERQ9BY12 RNU6-838P-201ENST00000363399 108 ntBASIC-6.26□□□□□ -3.41
SCAPERQ9BY12 Y_RNA.379-201ENST00000365653 102 ntBASIC-6.27□□□□□ -3.41
SCAPERQ9BY12 SNORD113-4-201ENST00000364802 75 ntBASIC-6.28□□□□□ -3.41
SCAPERQ9BY12 AL365222.1-201ENST00000614661 98 ntBASIC-6.3□□□□□ -3.42
SCAPERQ9BY12 RNU6-1131P-201ENST00000364955 107 ntBASIC-6.33□□□□□ -3.42
SCAPERQ9BY12 RNU6-81P-201ENST00000365608 104 ntBASIC-6.33□□□□□ -3.42
SCAPERQ9BY12 RNU6-49P-201ENST00000384256 107 ntBASIC-6.33□□□□□ -3.42
SCAPERQ9BY12 MT-TG-201ENST00000387429 68 ntBASIC-6.34□□□□□ -3.42
SCAPERQ9BY12 RNU6-787P-201ENST00000384032 107 ntBASIC-6.37□□□□□ -3.43
SCAPERQ9BY12 RNU6-327P-201ENST00000516270 127 ntBASIC-6.37□□□□□ -3.43
SCAPERQ9BY12 RNU6-294P-201ENST00000364999 102 ntBASIC-6.42□□□□□ -3.44
SCAPERQ9BY12 RNU6-463P-201ENST00000384340 107 ntBASIC-6.42□□□□□ -3.44
SCAPERQ9BY12 MIR450A2-201ENST00000385022 100 ntBASIC-6.45□□□□□ -3.44
SCAPERQ9BY12 RNU6-1168P-201ENST00000390831 104 ntBASIC-6.48□□□□□ -3.45
SCAPERQ9BY12 RNU6-147P-201ENST00000383983 107 ntBASIC-6.5□□□□□ -3.45
SCAPERQ9BY12 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-6.5□□□□□ -3.45
SCAPERQ9BY12 RNU6-471P-201ENST00000383944 106 ntBASIC-6.5□□□□□ -3.45
SCAPERQ9BY12 RNU6-1045P-201ENST00000516321 107 ntBASIC-6.5□□□□□ -3.45
SCAPERQ9BY12 RNU6-153P-201ENST00000364422 104 ntBASIC-6.56□□□□□ -3.46
SCAPERQ9BY12 Y_RNA.703-201ENST00000516846 111 ntBASIC-6.57□□□□□ -3.46
SCAPERQ9BY12 RNU6-829P-201ENST00000363700 112 ntBASIC-6.59□□□□□ -3.46
SCAPERQ9BY12 SNORD111B-201ENST00000408587 80 ntBASIC-6.59□□□□□ -3.47
SCAPERQ9BY12 RNU6-1091P-201ENST00000363945 107 ntBASIC-6.6□□□□□ -3.47
SCAPERQ9BY12 RNU6-22P-201ENST00000384355 107 ntBASIC-6.61□□□□□ -3.47
SCAPERQ9BY12 MIR3133-201ENST00000583157 78 ntBASIC-6.61□□□□□ -3.47
SCAPERQ9BY12 Y_RNA.386-201ENST00000383913 105 ntBASIC-6.63□□□□□ -3.47
SCAPERQ9BY12 RNU6-820P-201ENST00000384273 107 ntBASIC-6.67□□□□□ -3.48
SCAPERQ9BY12 MIR633-201ENST00000384821 98 ntBASIC-6.67□□□□□ -3.48
SCAPERQ9BY12 RNU6-1154P-201ENST00000391001 104 ntBASIC-6.67□□□□□ -3.48
SCAPERQ9BY12 RNY4P30-201ENST00000410216 95 ntBASIC-6.69□□□□□ -3.48
SCAPERQ9BY12 RNU6-1117P-201ENST00000384525 104 ntBASIC-6.7□□□□□ -3.48
SCAPERQ9BY12 RNU6-406P-201ENST00000516470 107 ntBASIC-6.7□□□□□ -3.48
SCAPERQ9BY12 RNU6-753P-201ENST00000363926 107 ntBASIC-6.73□□□□□ -3.49
SCAPERQ9BY12 RNU6-313P-201ENST00000516317 112 ntBASIC-6.74□□□□□ -3.49
SCAPERQ9BY12 MIR548F3-201ENST00000408509 87 ntBASIC-6.76□□□□□ -3.49
SCAPERQ9BY12 RNU6-857P-201ENST00000515893 110 ntBASIC-6.78□□□□□ -3.5
SCAPERQ9BY12 RNY4P19-201ENST00000362530 96 ntBASIC-6.79□□□□□ -3.5
SCAPERQ9BY12 RNU6-485P-201ENST00000363475 107 ntBASIC-6.79□□□□□ -3.5
SCAPERQ9BY12 RNU6-930P-201ENST00000390938 100 ntBASIC-6.79□□□□□ -3.5
SCAPERQ9BY12 RNA5SP89-201ENST00000410300 108 ntBASIC-6.79□□□□□ -3.5
SCAPERQ9BY12 MIR3202-2-201ENST00000635980 79 ntBASIC-6.83□□□□□ -3.5
SCAPERQ9BY12 SNORA26.2-201ENST00000390922 122 ntBASIC-6.84□□□□□ -3.51
SCAPERQ9BY12 RNU6-894P-201ENST00000517094 105 ntBASIC-6.89□□□□□ -3.51
SCAPERQ9BY12 RNU6-279P-201ENST00000391297 101 ntBASIC-6.91□□□□□ -3.52
SCAPERQ9BY12 RNU6-1275P-201ENST00000391087 107 ntBASIC-6.92□□□□□ -3.52
SCAPERQ9BY12 Y_RNA.81-201ENST00000362997 102 ntBASIC-6.93□□□□□ -3.52
SCAPERQ9BY12 MIR1255A-201ENST00000408338 113 ntBASIC-6.93□□□□□ -3.52
SCAPERQ9BY12 RNU6-919P-201ENST00000516731 104 ntBASIC-6.97□□□□□ -3.53
SCAPERQ9BY12 AC079150.2-201ENST00000443733 78 ntBASIC-6.99□□□□□ -3.53
SCAPERQ9BY12 RNU6-892P-201ENST00000410335 99 ntBASIC-7□□□□□ -3.53
SCAPERQ9BY12 RNU6-936P-201ENST00000384005 107 ntBASIC-7.03□□□□□ -3.54
SCAPERQ9BY12 RNU6-1011P-201ENST00000384668 107 ntBASIC-7.04□□□□□ -3.54
SCAPERQ9BY12 Y_RNA.694-201ENST00000516677 117 ntBASIC-7.04□□□□□ -3.54
SCAPERQ9BY12 MIR4662A-201ENST00000637499 67 ntBASIC-7.06□□□□□ -3.54
SCAPERQ9BY12 RNU6-215P-201ENST00000365169 102 ntBASIC-7.07□□□□□ -3.54
SCAPERQ9BY12 U6.103-201ENST00000637085 61 ntBASIC-7.1□□□□□ -3.55
SCAPERQ9BY12 SNORD20-201ENST00000384550 80 ntBASIC-7.11□□□□□ -3.55
SCAPERQ9BY12 RNU6-573P-201ENST00000383938 106 ntBASIC-7.16□□□□□ -3.56
SCAPERQ9BY12 Y_RNA.369-201ENST00000365568 117 ntBASIC-7.18□□□□□ -3.56
SCAPERQ9BY12 RNU6-44P-201ENST00000384045 107 ntBASIC-7.25□□□□□ -3.57
SCAPERQ9BY12 DLEU2_4.2-201ENST00000616613 58 ntBASIC-7.26□□□□□ -3.57
SCAPERQ9BY12 MIR5582-201ENST00000579697 68 ntBASIC-7.27□□□□□ -3.57
SCAPERQ9BY12 RNU6-499P-201ENST00000365615 107 ntBASIC-7.3□□□□□ -3.58
SCAPERQ9BY12 RNU6-794P-201ENST00000517261 64 ntBASIC-7.3□□□□□ -3.58
SCAPERQ9BY12 RNA5SP225-201ENST00000410874 135 ntBASIC-7.33□□□□□ -3.58
SCAPERQ9BY12 AC125388.1-201ENST00000459631 156 ntBASIC-7.35□□□□□ -3.59
SCAPERQ9BY12 SNORD78.1-201ENST00000390866 65 ntBASIC-7.37□□□□□ -3.59
SCAPERQ9BY12 RNU6-133P-201ENST00000383989 107 ntBASIC-7.4□□□□□ -3.59
SCAPERQ9BY12 MIR3671-201ENST00000580455 88 ntBASIC-7.46□□□□□ -3.6
SCAPERQ9BY12 SNORD73B-201ENST00000364394 72 ntBASIC-7.47□□□□□ -3.61
SCAPERQ9BY12 MIR548M-201ENST00000408260 86 ntBASIC-7.47□□□□□ -3.61
SCAPERQ9BY12 MIR3910-1-201ENST00000580936 111 ntBASIC-7.51□□□□□ -3.61
SCAPERQ9BY12 RNY4P29-201ENST00000410801 97 ntBASIC-7.52□□□□□ -3.61
SCAPERQ9BY12 Y_RNA.388-201ENST00000383919 113 ntBASIC-7.55□□□□□ -3.62
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms