Protein–RNA interactions for Protein: Q86TS7

LINC00643, Putative UPF0730 protein encoded by LINC00643, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643Q86TS7 Y_RNA.535-201ENST00000384612 99 ntBASIC-7.31□□□□□ -3.58
LINC00643Q86TS7 RNU6-1276P-201ENST00000365372 104 ntBASIC-7.33□□□□□ -3.58
LINC00643Q86TS7 Y_RNA.565-201ENST00000384719 101 ntBASIC-7.33□□□□□ -3.58
LINC00643Q86TS7 RNU6-838P-201ENST00000363399 108 ntBASIC-7.35□□□□□ -3.59
LINC00643Q86TS7 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-7.36□□□□□ -3.59
LINC00643Q86TS7 MIR606-201ENST00000384851 96 ntBASIC-7.37□□□□□ -3.59
LINC00643Q86TS7 Y_RNA.379-201ENST00000365653 102 ntBASIC-7.38□□□□□ -3.59
LINC00643Q86TS7 AC008267.6-201ENST00000441664 139 ntBASIC-7.38□□□□□ -3.59
LINC00643Q86TS7 SNORD113-4-201ENST00000364802 75 ntBASIC-7.39□□□□□ -3.59
LINC00643Q86TS7 RNU6-32P-201ENST00000383948 107 ntBASIC-7.39□□□□□ -3.59
LINC00643Q86TS7 RNU6-13P-201ENST00000384248 107 ntBASIC-7.39□□□□□ -3.59
LINC00643Q86TS7 RNU6-12P-201ENST00000384604 107 ntBASIC-7.39□□□□□ -3.59
LINC00643Q86TS7 RNU6-41P-201ENST00000384741 107 ntBASIC-7.39□□□□□ -3.59
LINC00643Q86TS7 RNU6-1212P-201ENST00000517023 104 ntBASIC-7.42□□□□□ -3.6
LINC00643Q86TS7 MIR548S-201ENST00000581352 82 ntBASIC-7.43□□□□□ -3.6
LINC00643Q86TS7 Y_RNA.464-201ENST00000384282 110 ntBASIC-7.45□□□□□ -3.6
LINC00643Q86TS7 AC026407.1-201ENST00000518369 204 ntBASIC-7.46□□□□□ -3.6
LINC00643Q86TS7 RNU6-1131P-201ENST00000364955 107 ntBASIC-7.47□□□□□ -3.61
LINC00643Q86TS7 RNU6-49P-201ENST00000384256 107 ntBASIC-7.49□□□□□ -3.61
LINC00643Q86TS7 RNU6-986P-201ENST00000363133 102 ntBASIC-7.5□□□□□ -3.61
LINC00643Q86TS7 RNU6-388P-201ENST00000517012 105 ntBASIC-7.5□□□□□ -3.61
LINC00643Q86TS7 RNU6-389P-201ENST00000517048 105 ntBASIC-7.5□□□□□ -3.61
LINC00643Q86TS7 RNU6-81P-201ENST00000365608 104 ntBASIC-7.51□□□□□ -3.61
LINC00643Q86TS7 MIR494-201ENST00000349529 81 ntBASIC-7.52□□□□□ -3.61
LINC00643Q86TS7 RNU6-787P-201ENST00000384032 107 ntBASIC-7.52□□□□□ -3.61
LINC00643Q86TS7 MIR4503-201ENST00000582187 83 ntBASIC-7.52□□□□□ -3.61
LINC00643Q86TS7 RNU6-738P-201ENST00000384531 106 ntBASIC-7.55□□□□□ -3.62
LINC00643Q86TS7 SNORD113-1-201ENST00000365321 69 ntBASIC-7.57□□□□□ -3.62
LINC00643Q86TS7 RNU6-620P-201ENST00000384017 96 ntBASIC-7.57□□□□□ -3.62
LINC00643Q86TS7 AL365222.1-201ENST00000614661 98 ntBASIC-7.59□□□□□ -3.62
LINC00643Q86TS7 RNU6-471P-201ENST00000383944 106 ntBASIC-7.66□□□□□ -3.64
LINC00643Q86TS7 MIR450A2-201ENST00000385022 100 ntBASIC-7.67□□□□□ -3.64
LINC00643Q86TS7 AC090425.1-201ENST00000610007 140 ntBASIC-7.67□□□□□ -3.64
LINC00643Q86TS7 Y_RNA.15-201ENST00000362420 102 ntBASIC-7.68□□□□□ -3.64
LINC00643Q86TS7 Y_RNA.61-201ENST00000362835 102 ntBASIC-7.68□□□□□ -3.64
LINC00643Q86TS7 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-7.68□□□□□ -3.64
LINC00643Q86TS7 RNU6-829P-201ENST00000363700 112 ntBASIC-7.72□□□□□ -3.65
LINC00643Q86TS7 RNU6-147P-201ENST00000383983 107 ntBASIC-7.75□□□□□ -3.65
LINC00643Q86TS7 Y_RNA.386-201ENST00000383913 105 ntBASIC-7.76□□□□□ -3.65
LINC00643Q86TS7 MIR3908-201ENST00000579798 126 ntBASIC-7.77□□□□□ -3.65
LINC00643Q86TS7 RNU6-463P-201ENST00000384340 107 ntBASIC-7.8□□□□□ -3.66
LINC00643Q86TS7 MIR633-201ENST00000384821 98 ntBASIC-7.84□□□□□ -3.66
LINC00643Q86TS7 RNU6-1168P-201ENST00000390831 104 ntBASIC-7.85□□□□□ -3.67
LINC00643Q86TS7 RNU6-406P-201ENST00000516470 107 ntBASIC-7.86□□□□□ -3.67
LINC00643Q86TS7 RNU6-294P-201ENST00000364999 102 ntBASIC-7.91□□□□□ -3.68
LINC00643Q86TS7 RNU6-753P-201ENST00000363926 107 ntBASIC-7.92□□□□□ -3.68
LINC00643Q86TS7 MT-TG-201ENST00000387429 68 ntBASIC-7.93□□□□□ -3.68
LINC00643Q86TS7 RNU6-820P-201ENST00000384273 107 ntBASIC-7.94□□□□□ -3.68
LINC00643Q86TS7 RNU6-930P-201ENST00000390938 100 ntBASIC-7.94□□□□□ -3.68
LINC00643Q86TS7 RNU6-857P-201ENST00000515893 110 ntBASIC-7.97□□□□□ -3.69
LINC00643Q86TS7 MIR548F3-201ENST00000408509 87 ntBASIC-7.99□□□□□ -3.69
LINC00643Q86TS7 RNY4P30-201ENST00000410216 95 ntBASIC-7.99□□□□□ -3.69
LINC00643Q86TS7 RNU6-327P-201ENST00000516270 127 ntBASIC-7.99□□□□□ -3.69
LINC00643Q86TS7 Y_RNA.703-201ENST00000516846 111 ntBASIC-7.99□□□□□ -3.69
LINC00643Q86TS7 SNORA26.2-201ENST00000390922 122 ntBASIC-8.02□□□□□ -3.69
LINC00643Q86TS7 MIR3202-2-201ENST00000635980 79 ntBASIC-8.02□□□□□ -3.69
LINC00643Q86TS7 RNU6-22P-201ENST00000384355 107 ntBASIC-8.03□□□□□ -3.69
LINC00643Q86TS7 MIR3133-201ENST00000583157 78 ntBASIC-8.03□□□□□ -3.69
LINC00643Q86TS7 SNORD111B-201ENST00000408587 80 ntBASIC-8.04□□□□□ -3.7
LINC00643Q86TS7 RNU6-1154P-201ENST00000391001 104 ntBASIC-8.05□□□□□ -3.7
LINC00643Q86TS7 RNU6-1091P-201ENST00000363945 107 ntBASIC-8.08□□□□□ -3.7
LINC00643Q86TS7 RNA5SP89-201ENST00000410300 108 ntBASIC-8.09□□□□□ -3.7
LINC00643Q86TS7 RNU6-279P-201ENST00000391297 101 ntBASIC-8.11□□□□□ -3.71
LINC00643Q86TS7 RNU6-313P-201ENST00000516317 112 ntBASIC-8.13□□□□□ -3.71
LINC00643Q86TS7 RNU6-1117P-201ENST00000384525 104 ntBASIC-8.14□□□□□ -3.71
LINC00643Q86TS7 AC079150.2-201ENST00000443733 78 ntBASIC-8.15□□□□□ -3.71
LINC00643Q86TS7 RNU6-1045P-201ENST00000516321 107 ntBASIC-8.17□□□□□ -3.72
LINC00643Q86TS7 Y_RNA.81-201ENST00000362997 102 ntBASIC-8.18□□□□□ -3.72
LINC00643Q86TS7 MIR1255A-201ENST00000408338 113 ntBASIC-8.22□□□□□ -3.73
LINC00643Q86TS7 RNU6-153P-201ENST00000364422 104 ntBASIC-8.23□□□□□ -3.73
LINC00643Q86TS7 RNU6-1275P-201ENST00000391087 107 ntBASIC-8.23□□□□□ -3.73
LINC00643Q86TS7 RNU6-936P-201ENST00000384005 107 ntBASIC-8.24□□□□□ -3.73
LINC00643Q86TS7 RNU6-485P-201ENST00000363475 107 ntBASIC-8.27□□□□□ -3.73
LINC00643Q86TS7 RNU6-919P-201ENST00000516731 104 ntBASIC-8.38□□□□□ -3.75
LINC00643Q86TS7 MIR4662A-201ENST00000637499 67 ntBASIC-8.38□□□□□ -3.75
LINC00643Q86TS7 Y_RNA.694-201ENST00000516677 117 ntBASIC-8.41□□□□□ -3.76
LINC00643Q86TS7 RNU6-215P-201ENST00000365169 102 ntBASIC-8.48□□□□□ -3.77
LINC00643Q86TS7 RNU6-894P-201ENST00000517094 105 ntBASIC-8.49□□□□□ -3.77
LINC00643Q86TS7 RNU6-573P-201ENST00000383938 106 ntBASIC-8.53□□□□□ -3.77
LINC00643Q86TS7 U6.103-201ENST00000637085 61 ntBASIC-8.53□□□□□ -3.77
LINC00643Q86TS7 SNORD20-201ENST00000384550 80 ntBASIC-8.54□□□□□ -3.78
LINC00643Q86TS7 DLEU2_4.2-201ENST00000616613 58 ntBASIC-8.54□□□□□ -3.78
LINC00643Q86TS7 Y_RNA.369-201ENST00000365568 117 ntBASIC-8.57□□□□□ -3.78
LINC00643Q86TS7 RNA5SP225-201ENST00000410874 135 ntBASIC-8.59□□□□□ -3.78
LINC00643Q86TS7 MIR5582-201ENST00000579697 68 ntBASIC-8.61□□□□□ -3.79
LINC00643Q86TS7 RNU6-499P-201ENST00000365615 107 ntBASIC-8.62□□□□□ -3.79
LINC00643Q86TS7 RNU6-44P-201ENST00000384045 107 ntBASIC-8.67□□□□□ -3.8
LINC00643Q86TS7 AC125388.1-201ENST00000459631 156 ntBASIC-8.67□□□□□ -3.8
LINC00643Q86TS7 SNORD78.1-201ENST00000390866 65 ntBASIC-8.7□□□□□ -3.8
LINC00643Q86TS7 MIR3671-201ENST00000580455 88 ntBASIC-8.76□□□□□ -3.81
LINC00643Q86TS7 RNU6-1011P-201ENST00000384668 107 ntBASIC-8.84□□□□□ -3.82
LINC00643Q86TS7 SNORD73B-201ENST00000364394 72 ntBASIC-8.85□□□□□ -3.83
LINC00643Q86TS7 RNY4P29-201ENST00000410801 97 ntBASIC-8.87□□□□□ -3.83
LINC00643Q86TS7 RNU6-133P-201ENST00000383989 107 ntBASIC-8.88□□□□□ -3.83
LINC00643Q86TS7 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-8.91□□□□□ -3.84
LINC00643Q86TS7 RNU6-614P-201ENST00000384369 107 ntBASIC-8.92□□□□□ -3.84
LINC00643Q86TS7 U6.59-201ENST00000615686 107 ntBASIC-8.92□□□□□ -3.84
LINC00643Q86TS7 Y_RNA.388-201ENST00000383919 113 ntBASIC-8.93□□□□□ -3.84
LINC00643Q86TS7 RNU6-892P-201ENST00000410335 99 ntBASIC-9.01□□□□□ -3.85
LINC00643Q86TS7 RNY4P19-201ENST00000362530 96 ntBASIC-9.02□□□□□ -3.85
Retrieved 100 of 98,524 protein–RNA pairs in 178.8 ms