Protein–RNA interactions for Protein: Q9P1Q0

VPS54, Vacuolar protein sorting-associated protein 54, humanhuman

Predictions only

Length 977 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54Q9P1Q0 RNU6-857P-201ENST00000515893 110 ntBASIC-1.88□□□□□ -2.71
VPS54Q9P1Q0 RNU7-160P-201ENST00000516660 62 ntBASIC-1.88□□□□□ -2.71
VPS54Q9P1Q0 MIR4748-201ENST00000578076 82 ntBASIC-1.88□□□□□ -2.71
VPS54Q9P1Q0 MIR4723-201ENST00000585070 81 ntBASIC-1.88□□□□□ -2.71
VPS54Q9P1Q0 MIR3202-2-201ENST00000635980 79 ntBASIC-1.88□□□□□ -2.71
VPS54Q9P1Q0 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.89□□□□□ -2.71
VPS54Q9P1Q0 SNORA25.4-201ENST00000363666 124 ntBASIC-1.9□□□□□ -2.71
VPS54Q9P1Q0 RNU6-122P-201ENST00000516818 107 ntBASIC-1.9□□□□□ -2.71
VPS54Q9P1Q0 RNU6-520P-201ENST00000384717 104 ntBASIC-1.91□□□□□ -2.72
VPS54Q9P1Q0 MIR548W-201ENST00000581970 74 ntBASIC-1.91□□□□□ -2.72
VPS54Q9P1Q0 RNU6-828P-201ENST00000364876 107 ntBASIC-1.92□□□□□ -2.72
VPS54Q9P1Q0 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.92□□□□□ -2.72
VPS54Q9P1Q0 SNORA26.2-201ENST00000390922 122 ntBASIC-1.92□□□□□ -2.72
VPS54Q9P1Q0 MIR466-201ENST00000580653 84 ntBASIC-1.92□□□□□ -2.72
VPS54Q9P1Q0 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.93□□□□□ -2.72
VPS54Q9P1Q0 SNORA40.16-201ENST00000517238 121 ntBASIC-1.93□□□□□ -2.72
VPS54Q9P1Q0 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.94□□□□□ -2.72
VPS54Q9P1Q0 SNORA40B-201ENST00000385573 128 ntBASIC-1.94□□□□□ -2.72
VPS54Q9P1Q0 RNA5SP225-201ENST00000410874 135 ntBASIC-1.94□□□□□ -2.72
VPS54Q9P1Q0 MIR202-201ENST00000362219 110 ntBASIC-1.95□□□□□ -2.72
VPS54Q9P1Q0 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.95□□□□□ -2.72
VPS54Q9P1Q0 RNU6-279P-201ENST00000391297 101 ntBASIC-1.95□□□□□ -2.72
VPS54Q9P1Q0 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.95□□□□□ -2.72
VPS54Q9P1Q0 RNU6-649P-201ENST00000384463 107 ntBASIC-1.96□□□□□ -2.72
VPS54Q9P1Q0 snoU13.10-201ENST00000459301 103 ntBASIC-1.96□□□□□ -2.72
VPS54Q9P1Q0 U6.111-201ENST00000636093 83 ntBASIC-1.96□□□□□ -2.72
VPS54Q9P1Q0 RNU6-1255P-201ENST00000363434 112 ntBASIC-1.97□□□□□ -2.72
VPS54Q9P1Q0 MIR581-201ENST00000384895 96 ntBASIC-1.97□□□□□ -2.72
VPS54Q9P1Q0 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.98□□□□□ -2.73
VPS54Q9P1Q0 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.98□□□□□ -2.73
VPS54Q9P1Q0 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.98□□□□□ -2.73
VPS54Q9P1Q0 RNU6-871P-201ENST00000516122 100 ntBASIC-1.98□□□□□ -2.73
VPS54Q9P1Q0 MIR4511-201ENST00000582784 87 ntBASIC-1.99□□□□□ -2.73
VPS54Q9P1Q0 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.99□□□□□ -2.73
VPS54Q9P1Q0 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.99□□□□□ -2.73
VPS54Q9P1Q0 FTX_4.1-201ENST00000616291 147 ntBASIC-2.01□□□□□ -2.73
VPS54Q9P1Q0 SNORD78.1-201ENST00000390866 65 ntBASIC-2.02□□□□□ -2.73
VPS54Q9P1Q0 RNU6-530P-201ENST00000391180 107 ntBASIC-2.02□□□□□ -2.73
VPS54Q9P1Q0 Y_RNA.565-201ENST00000384719 101 ntBASIC-2.03□□□□□ -2.73
VPS54Q9P1Q0 RNU6-1191P-201ENST00000516799 107 ntBASIC-2.03□□□□□ -2.73
VPS54Q9P1Q0 RNU7-119P-201ENST00000459279 63 ntBASIC-2.04□□□□□ -2.74
VPS54Q9P1Q0 RNU6-539P-201ENST00000516665 103 ntBASIC-2.04□□□□□ -2.74
VPS54Q9P1Q0 RNU6-1296P-201ENST00000383879 107 ntBASIC-2.05□□□□□ -2.74
VPS54Q9P1Q0 SNORD60-201ENST00000383903 83 ntBASIC-2.05□□□□□ -2.74
VPS54Q9P1Q0 Y_RNA.397-201ENST00000383950 98 ntBASIC-2.05□□□□□ -2.74
VPS54Q9P1Q0 AC103706.3-201ENST00000636297 85 ntBASIC-2.05□□□□□ -2.74
VPS54Q9P1Q0 SNORD18C-201ENST00000362704 69 ntBASIC-2.06□□□□□ -2.74
VPS54Q9P1Q0 RNU6-940P-201ENST00000363433 104 ntBASIC-2.06□□□□□ -2.74
VPS54Q9P1Q0 RNU6-800P-201ENST00000384473 103 ntBASIC-2.06□□□□□ -2.74
VPS54Q9P1Q0 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-2.06□□□□□ -2.74
VPS54Q9P1Q0 SNORA17.4-201ENST00000391287 132 ntBASIC-2.06□□□□□ -2.74
VPS54Q9P1Q0 Y_RNA.513-201ENST00000384522 100 ntBASIC-2.07□□□□□ -2.74
VPS54Q9P1Q0 MIR548N-201ENST00000408742 75 ntBASIC-2.07□□□□□ -2.74
VPS54Q9P1Q0 MIR3938-201ENST00000582157 103 ntBASIC-2.07□□□□□ -2.74
VPS54Q9P1Q0 RNU6-230P-201ENST00000362457 104 ntBASIC-2.08□□□□□ -2.74
VPS54Q9P1Q0 RNU6-141P-201ENST00000410499 105 ntBASIC-2.08□□□□□ -2.74
VPS54Q9P1Q0 Y_RNA.43-201ENST00000362670 111 ntBASIC-2.09□□□□□ -2.74
VPS54Q9P1Q0 RNU6-361P-201ENST00000364454 107 ntBASIC-2.09□□□□□ -2.74
VPS54Q9P1Q0 AL451105.1-201ENST00000450005 189 ntBASIC-2.09□□□□□ -2.74
VPS54Q9P1Q0 AC097484.2-201ENST00000509147 251 ntBASIC-2.09□□□□□ -2.74
VPS54Q9P1Q0 RNY4P7-201ENST00000364600 96 ntBASIC-2.1□□□□□ -2.75
VPS54Q9P1Q0 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.1□□□□□ -2.75
VPS54Q9P1Q0 RNY4P9-201ENST00000363194 97 ntBASIC-2.11□□□□□ -2.75
VPS54Q9P1Q0 RNU6-776P-201ENST00000364403 104 ntBASIC-2.12□□□□□ -2.75
VPS54Q9P1Q0 RNU6-1022P-201ENST00000365049 104 ntBASIC-2.12□□□□□ -2.75
VPS54Q9P1Q0 MIRLET7A2-201ENST00000362105 72 ntBASIC-2.13□□□□□ -2.75
VPS54Q9P1Q0 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.13□□□□□ -2.75
VPS54Q9P1Q0 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.13□□□□□ -2.75
VPS54Q9P1Q0 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.13□□□□□ -2.75
VPS54Q9P1Q0 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.13□□□□□ -2.75
VPS54Q9P1Q0 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.13□□□□□ -2.75
VPS54Q9P1Q0 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.13□□□□□ -2.75
VPS54Q9P1Q0 MIR4426-201ENST00000640330 63 ntBASIC-2.13□□□□□ -2.75
VPS54Q9P1Q0 AC110620.1-201ENST00000416042 228 ntBASIC-2.14□□□□□ -2.75
VPS54Q9P1Q0 MIR4679-1-201ENST00000637619 75 ntBASIC-2.15□□□□□ -2.75
VPS54Q9P1Q0 Y_RNA.519-201ENST00000384553 102 ntBASIC-2.16□□□□□ -2.76
VPS54Q9P1Q0 SNX3P1Y-201ENST00000615757 176 ntBASIC-2.16□□□□□ -2.76
VPS54Q9P1Q0 SNORD45.2-201ENST00000363552 72 ntBASIC-2.17□□□□□ -2.76
VPS54Q9P1Q0 Y_RNA.386-201ENST00000383913 105 ntBASIC-2.17□□□□□ -2.76
VPS54Q9P1Q0 RNU6-419P-201ENST00000517030 63 ntBASIC-2.17□□□□□ -2.76
VPS54Q9P1Q0 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-2.18□□□□□ -2.76
VPS54Q9P1Q0 Y_RNA.349-201ENST00000365406 102 ntBASIC-2.19□□□□□ -2.76
VPS54Q9P1Q0 MIR4662A-201ENST00000637499 67 ntBASIC-2.19□□□□□ -2.76
VPS54Q9P1Q0 RNU6-742P-201ENST00000365289 107 ntBASIC-2.2□□□□□ -2.76
VPS54Q9P1Q0 RNY4-201ENST00000516507 96 ntBASIC-2.2□□□□□ -2.76
VPS54Q9P1Q0 RNU6-1079P-201ENST00000362861 110 ntBASIC-2.21□□□□□ -2.76
VPS54Q9P1Q0 Y_RNA.204-201ENST00000364112 102 ntBASIC-2.21□□□□□ -2.76
VPS54Q9P1Q0 SNORD113-3-201ENST00000364830 72 ntBASIC-2.21□□□□□ -2.76
VPS54Q9P1Q0 MIR1302-4-201ENST00000408701 150 ntBASIC-2.21□□□□□ -2.76
VPS54Q9P1Q0 RNU6-68P-201ENST00000516576 104 ntBASIC-2.21□□□□□ -2.76
VPS54Q9P1Q0 RNU6-1047P-201ENST00000364418 107 ntBASIC-2.22□□□□□ -2.76
VPS54Q9P1Q0 RNU6-300P-201ENST00000459080 104 ntBASIC-2.22□□□□□ -2.76
VPS54Q9P1Q0 Y_RNA.186-201ENST00000363899 92 ntBASIC-2.23□□□□□ -2.77
VPS54Q9P1Q0 RNU6-912P-201ENST00000363800 104 ntBASIC-2.24□□□□□ -2.77
VPS54Q9P1Q0 RNU6-590P-201ENST00000365039 107 ntBASIC-2.24□□□□□ -2.77
VPS54Q9P1Q0 RNU6-1324P-201ENST00000384222 107 ntBASIC-2.24□□□□□ -2.77
VPS54Q9P1Q0 MIR5693-201ENST00000577722 73 ntBASIC-2.25□□□□□ -2.77
VPS54Q9P1Q0 MIR548AJ2-201ENST00000408539 92 ntBASIC-2.27□□□□□ -2.77
VPS54Q9P1Q0 RNU6-1312P-201ENST00000362425 108 ntBASIC-2.28□□□□□ -2.77
VPS54Q9P1Q0 RNU6-446P-201ENST00000362827 106 ntBASIC-2.28□□□□□ -2.77
Retrieved 100 of 98,524 protein–RNA pairs in 2028.6 ms