Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.41□□□□□ -2.8
VPS35Q96QK1 AL451105.1-201ENST00000450005 189 ntBASIC-2.41□□□□□ -2.8
VPS35Q96QK1 RNU6-634P-201ENST00000459134 106 ntBASIC-2.41□□□□□ -2.8
VPS35Q96QK1 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-2.41□□□□□ -2.8
VPS35Q96QK1 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-2.41□□□□□ -2.8
VPS35Q96QK1 MIR4426-201ENST00000640330 63 ntBASIC-2.42□□□□□ -2.8
VPS35Q96QK1 MIR494-201ENST00000349529 81 ntBASIC-2.43□□□□□ -2.8
VPS35Q96QK1 Y_RNA.228-201ENST00000364346 98 ntBASIC-2.43□□□□□ -2.8
VPS35Q96QK1 RNU6-663P-201ENST00000391105 106 ntBASIC-2.43□□□□□ -2.8
VPS35Q96QK1 MIR379-201ENST00000362218 67 ntBASIC-2.44□□□□□ -2.8
VPS35Q96QK1 RNU6-1296P-201ENST00000383879 107 ntBASIC-2.44□□□□□ -2.8
VPS35Q96QK1 RNU6-242P-201ENST00000384359 107 ntBASIC-2.44□□□□□ -2.8
VPS35Q96QK1 MIR548AJ2-201ENST00000408539 92 ntBASIC-2.44□□□□□ -2.8
VPS35Q96QK1 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-2.44□□□□□ -2.8
VPS35Q96QK1 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-2.44□□□□□ -2.8
VPS35Q96QK1 RNU6-1047P-201ENST00000364418 107 ntBASIC-2.45□□□□□ -2.8
VPS35Q96QK1 MIR496-201ENST00000385226 102 ntBASIC-2.45□□□□□ -2.8
VPS35Q96QK1 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.45□□□□□ -2.8
VPS35Q96QK1 RNU6-912P-201ENST00000363800 104 ntBASIC-2.46□□□□□ -2.8
VPS35Q96QK1 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.46□□□□□ -2.8
VPS35Q96QK1 SNORA25.4-201ENST00000363666 124 ntBASIC-2.47□□□□□ -2.8
VPS35Q96QK1 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-2.47□□□□□ -2.8
VPS35Q96QK1 RNU7-119P-201ENST00000459279 63 ntBASIC-2.47□□□□□ -2.8
VPS35Q96QK1 SNORD45.2-201ENST00000363552 72 ntBASIC-2.48□□□□□ -2.81
VPS35Q96QK1 RNU6-590P-201ENST00000365039 107 ntBASIC-2.48□□□□□ -2.81
VPS35Q96QK1 RNU6-44P-201ENST00000384045 107 ntBASIC-2.48□□□□□ -2.81
VPS35Q96QK1 MT-TM-201ENST00000387377 68 ntBASIC-2.48□□□□□ -2.81
VPS35Q96QK1 RNU6-141P-201ENST00000410499 105 ntBASIC-2.48□□□□□ -2.81
VPS35Q96QK1 U7.4-201ENST00000614961 63 ntBASIC-2.48□□□□□ -2.81
VPS35Q96QK1 MIRLET7A2-201ENST00000362105 72 ntBASIC-2.49□□□□□ -2.81
VPS35Q96QK1 Y_RNA.129-201ENST00000363392 110 ntBASIC-2.49□□□□□ -2.81
VPS35Q96QK1 MIR450A2-201ENST00000385022 100 ntBASIC-2.49□□□□□ -2.81
VPS35Q96QK1 RNU6-300P-201ENST00000459080 104 ntBASIC-2.5□□□□□ -2.81
VPS35Q96QK1 RNY4P30-201ENST00000410216 95 ntBASIC-2.51□□□□□ -2.81
VPS35Q96QK1 RNY4P9-201ENST00000363194 97 ntBASIC-2.52□□□□□ -2.81
VPS35Q96QK1 RNU6-1124P-201ENST00000384169 107 ntBASIC-2.52□□□□□ -2.81
VPS35Q96QK1 Y_RNA.320-201ENST00000365144 102 ntBASIC-2.53□□□□□ -2.81
VPS35Q96QK1 RNU6-419P-201ENST00000517030 63 ntBASIC-2.53□□□□□ -2.81
VPS35Q96QK1 RNU6-176P-201ENST00000517196 105 ntBASIC-2.53□□□□□ -2.81
VPS35Q96QK1 RNU6-153P-201ENST00000364422 104 ntBASIC-2.54□□□□□ -2.82
VPS35Q96QK1 RNU6-742P-201ENST00000365289 107 ntBASIC-2.54□□□□□ -2.82
VPS35Q96QK1 AL603908.1-201ENST00000406098 201 ntBASIC-2.54□□□□□ -2.82
VPS35Q96QK1 MIR4511-201ENST00000582784 87 ntBASIC-2.54□□□□□ -2.82
VPS35Q96QK1 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.56□□□□□ -2.82
VPS35Q96QK1 RNU6-940P-201ENST00000363433 104 ntBASIC-2.57□□□□□ -2.82
VPS35Q96QK1 RNU6-294P-201ENST00000364999 102 ntBASIC-2.57□□□□□ -2.82
VPS35Q96QK1 Y_RNA.519-201ENST00000384553 102 ntBASIC-2.57□□□□□ -2.82
VPS35Q96QK1 Y_RNA.545-201ENST00000384652 105 ntBASIC-2.57□□□□□ -2.82
VPS35Q96QK1 SNORD30.1-201ENST00000391309 70 ntBASIC-2.57□□□□□ -2.82
VPS35Q96QK1 Y_RNA.434-201ENST00000384090 100 ntBASIC-2.58□□□□□ -2.82
VPS35Q96QK1 MIR3938-201ENST00000582157 103 ntBASIC-2.58□□□□□ -2.82
VPS35Q96QK1 RNU6-820P-201ENST00000384273 107 ntBASIC-2.6□□□□□ -2.83
VPS35Q96QK1 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-2.6□□□□□ -2.83
VPS35Q96QK1 AC103706.3-201ENST00000636297 85 ntBASIC-2.6□□□□□ -2.83
VPS35Q96QK1 MIR1254-1-201ENST00000408257 97 ntBASIC-2.61□□□□□ -2.83
VPS35Q96QK1 AC062037.1-201ENST00000605302 128 ntBASIC-2.61□□□□□ -2.83
VPS35Q96QK1 U6.111-201ENST00000636093 83 ntBASIC-2.61□□□□□ -2.83
VPS35Q96QK1 Y_RNA.513-201ENST00000384522 100 ntBASIC-2.62□□□□□ -2.83
VPS35Q96QK1 Y_RNA.694-201ENST00000516677 117 ntBASIC-2.62□□□□□ -2.83
VPS35Q96QK1 SNX3P1Y-201ENST00000615757 176 ntBASIC-2.63□□□□□ -2.83
VPS35Q96QK1 RNU6-406P-201ENST00000516470 107 ntBASIC-2.64□□□□□ -2.83
VPS35Q96QK1 RNU6-539P-201ENST00000516665 103 ntBASIC-2.65□□□□□ -2.83
VPS35Q96QK1 Y_RNA.403-201ENST00000383977 101 ntBASIC-2.66□□□□□ -2.84
VPS35Q96QK1 SNORD54-201ENST00000459159 67 ntBASIC-2.66□□□□□ -2.84
VPS35Q96QK1 RNU6-871P-201ENST00000516122 100 ntBASIC-2.67□□□□□ -2.84
VPS35Q96QK1 RNU6-345P-201ENST00000517001 107 ntBASIC-2.67□□□□□ -2.84
VPS35Q96QK1 RNY4P7-201ENST00000364600 96 ntBASIC-2.68□□□□□ -2.84
VPS35Q96QK1 MIR5582-201ENST00000579697 68 ntBASIC-2.68□□□□□ -2.84
VPS35Q96QK1 Y_RNA.369-201ENST00000365568 117 ntBASIC-2.7□□□□□ -2.84
VPS35Q96QK1 AC110620.1-201ENST00000416042 228 ntBASIC-2.7□□□□□ -2.84
VPS35Q96QK1 Y_RNA.81-201ENST00000362997 102 ntBASIC-2.71□□□□□ -2.84
VPS35Q96QK1 RNU6-1169P-201ENST00000363537 103 ntBASIC-2.71□□□□□ -2.84
VPS35Q96QK1 RNU6-857P-201ENST00000515893 110 ntBASIC-2.73□□□□□ -2.85
VPS35Q96QK1 Y_RNA.722-201ENST00000517279 114 ntBASIC-2.73□□□□□ -2.85
VPS35Q96QK1 MIR548X-201ENST00000580069 75 ntBASIC-2.73□□□□□ -2.85
VPS35Q96QK1 MIR3202-2-201ENST00000635980 79 ntBASIC-2.73□□□□□ -2.85
VPS35Q96QK1 Y_RNA.63-201ENST00000362841 102 ntBASIC-2.74□□□□□ -2.85
VPS35Q96QK1 RNU6-800P-201ENST00000384473 103 ntBASIC-2.74□□□□□ -2.85
VPS35Q96QK1 RNU6-279P-201ENST00000391297 101 ntBASIC-2.75□□□□□ -2.85
VPS35Q96QK1 AL731768.1-201ENST00000603124 139 ntBASIC-2.75□□□□□ -2.85
VPS35Q96QK1 Y_RNA.59-201ENST00000362828 102 ntBASIC-2.76□□□□□ -2.85
VPS35Q96QK1 MIR4679-1-201ENST00000637619 75 ntBASIC-2.76□□□□□ -2.85
VPS35Q96QK1 RNA5SP93-201ENST00000362525 114 ntBASIC-2.78□□□□□ -2.85
VPS35Q96QK1 Y_RNA.43-201ENST00000362670 111 ntBASIC-2.78□□□□□ -2.85
VPS35Q96QK1 RNU6-1277P-201ENST00000364561 107 ntBASIC-2.78□□□□□ -2.85
VPS35Q96QK1 Y_RNA.382-201ENST00000365672 114 ntBASIC-2.79□□□□□ -2.86
VPS35Q96QK1 Y_RNA.397-201ENST00000383950 98 ntBASIC-2.79□□□□□ -2.86
VPS35Q96QK1 MIR1255A-201ENST00000408338 113 ntBASIC-2.79□□□□□ -2.86
VPS35Q96QK1 RNU6-822P-201ENST00000362707 106 ntBASIC-2.81□□□□□ -2.86
VPS35Q96QK1 Y_RNA.204-201ENST00000364112 102 ntBASIC-2.81□□□□□ -2.86
VPS35Q96QK1 RNU6-1079P-201ENST00000362861 110 ntBASIC-2.82□□□□□ -2.86
VPS35Q96QK1 Y_RNA.386-201ENST00000383913 105 ntBASIC-2.82□□□□□ -2.86
VPS35Q96QK1 RNU6-446P-201ENST00000362827 106 ntBASIC-2.83□□□□□ -2.86
VPS35Q96QK1 RNU6-573P-201ENST00000383938 106 ntBASIC-2.83□□□□□ -2.86
VPS35Q96QK1 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.84□□□□□ -2.86
VPS35Q96QK1 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.84□□□□□ -2.86
VPS35Q96QK1 RNU6-230P-201ENST00000362457 104 ntBASIC-2.85□□□□□ -2.87
VPS35Q96QK1 AC139453.2-201ENST00000487255 133 ntBASIC-2.85□□□□□ -2.87
VPS35Q96QK1 SNORD73B-201ENST00000364394 72 ntBASIC-2.86□□□□□ -2.87
VPS35Q96QK1 RNU6-1312P-201ENST00000362425 108 ntBASIC-2.87□□□□□ -2.87
Retrieved 100 of 98,524 protein–RNA pairs in 217.6 ms