Protein–RNA interactions for Protein: Q96CM3

RPUSD4, Mitochondrial RNA pseudouridine synthase RPUSD4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4Q96CM3 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.63□□□□□ -2.67
RPUSD4Q96CM3 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.63□□□□□ -2.67
RPUSD4Q96CM3 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.63□□□□□ -2.67
RPUSD4Q96CM3 SNORD60-201ENST00000383903 83 ntBASIC-1.64□□□□□ -2.67
RPUSD4Q96CM3 RNU6-634P-201ENST00000459134 106 ntBASIC-1.64□□□□□ -2.67
RPUSD4Q96CM3 AC062037.1-201ENST00000605302 128 ntBASIC-1.64□□□□□ -2.67
RPUSD4Q96CM3 FTX_4.1-201ENST00000616291 147 ntBASIC-1.64□□□□□ -2.67
RPUSD4Q96CM3 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.65□□□□□ -2.67
RPUSD4Q96CM3 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.65□□□□□ -2.67
RPUSD4Q96CM3 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.65□□□□□ -2.67
RPUSD4Q96CM3 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.65□□□□□ -2.67
RPUSD4Q96CM3 MIR4426-201ENST00000640330 63 ntBASIC-1.65□□□□□ -2.67
RPUSD4Q96CM3 SNORA25.5-201ENST00000363782 126 ntBASIC-1.66□□□□□ -2.68
RPUSD4Q96CM3 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.66□□□□□ -2.68
RPUSD4Q96CM3 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.66□□□□□ -2.68
RPUSD4Q96CM3 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.67□□□□□ -2.68
RPUSD4Q96CM3 RNU6-663P-201ENST00000391105 106 ntBASIC-1.67□□□□□ -2.68
RPUSD4Q96CM3 MIR3202-2-201ENST00000635980 79 ntBASIC-1.67□□□□□ -2.68
RPUSD4Q96CM3 MIR1254-1-201ENST00000408257 97 ntBASIC-1.68□□□□□ -2.68
RPUSD4Q96CM3 AL451105.1-201ENST00000450005 189 ntBASIC-1.68□□□□□ -2.68
RPUSD4Q96CM3 MIR466-201ENST00000580653 84 ntBASIC-1.68□□□□□ -2.68
RPUSD4Q96CM3 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.68□□□□□ -2.68
RPUSD4Q96CM3 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1.69□□□□□ -2.68
RPUSD4Q96CM3 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-1.7□□□□□ -2.68
RPUSD4Q96CM3 RNU6-590P-201ENST00000365039 107 ntBASIC-1.71□□□□□ -2.68
RPUSD4Q96CM3 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.72□□□□□ -2.68
RPUSD4Q96CM3 Y_RNA.63-201ENST00000362841 102 ntBASIC-1.72□□□□□ -2.68
RPUSD4Q96CM3 SNX3P1X-201ENST00000414887 175 ntBASIC-1.72□□□□□ -2.68
RPUSD4Q96CM3 RNU6-1169P-201ENST00000363537 103 ntBASIC-1.73□□□□□ -2.69
RPUSD4Q96CM3 SNORA25.4-201ENST00000363666 124 ntBASIC-1.73□□□□□ -2.69
RPUSD4Q96CM3 RNU6-300P-201ENST00000459080 104 ntBASIC-1.73□□□□□ -2.69
RPUSD4Q96CM3 RNU6-1298P-201ENST00000362456 101 ntBASIC-1.74□□□□□ -2.69
RPUSD4Q96CM3 MIR601-201ENST00000385256 79 ntBASIC-1.74□□□□□ -2.69
RPUSD4Q96CM3 RNU6-419P-201ENST00000517030 63 ntBASIC-1.74□□□□□ -2.69
RPUSD4Q96CM3 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.75□□□□□ -2.69
RPUSD4Q96CM3 MIR496-201ENST00000385226 102 ntBASIC-1.75□□□□□ -2.69
RPUSD4Q96CM3 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.75□□□□□ -2.69
RPUSD4Q96CM3 RNA5SP170-201ENST00000517150 101 ntBASIC-1.75□□□□□ -2.69
RPUSD4Q96CM3 MIR4511-201ENST00000582784 87 ntBASIC-1.75□□□□□ -2.69
RPUSD4Q96CM3 RNA5SP331-201ENST00000364986 107 ntBASIC-1.76□□□□□ -2.69
RPUSD4Q96CM3 RNU6-279P-201ENST00000391297 101 ntBASIC-1.76□□□□□ -2.69
RPUSD4Q96CM3 SNORD30.1-201ENST00000391309 70 ntBASIC-1.76□□□□□ -2.69
RPUSD4Q96CM3 RNU6-871P-201ENST00000516122 100 ntBASIC-1.76□□□□□ -2.69
RPUSD4Q96CM3 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.77□□□□□ -2.69
RPUSD4Q96CM3 U6.111-201ENST00000636093 83 ntBASIC-1.77□□□□□ -2.69
RPUSD4Q96CM3 MIR198-201ENST00000637333 62 ntBASIC-1.77□□□□□ -2.69
RPUSD4Q96CM3 SNORD73B-201ENST00000364394 72 ntBASIC-1.78□□□□□ -2.69
RPUSD4Q96CM3 MIR3938-201ENST00000582157 103 ntBASIC-1.78□□□□□ -2.69
RPUSD4Q96CM3 MIR379-201ENST00000362218 67 ntBASIC-1.79□□□□□ -2.7
RPUSD4Q96CM3 RNU6-573P-201ENST00000383938 106 ntBASIC-1.79□□□□□ -2.7
RPUSD4Q96CM3 RNU6-446P-201ENST00000362827 106 ntBASIC-1.8□□□□□ -2.7
RPUSD4Q96CM3 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.8□□□□□ -2.7
RPUSD4Q96CM3 RNU7-119P-201ENST00000459279 63 ntBASIC-1.8□□□□□ -2.7
RPUSD4Q96CM3 RNU6-857P-201ENST00000515893 110 ntBASIC-1.8□□□□□ -2.7
RPUSD4Q96CM3 SNX3P1Y-201ENST00000615757 176 ntBASIC-1.8□□□□□ -2.7
RPUSD4Q96CM3 RNY4P27-201ENST00000363341 96 ntBASIC-1.81□□□□□ -2.7
RPUSD4Q96CM3 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.81□□□□□ -2.7
RPUSD4Q96CM3 RNY4P9-201ENST00000363194 97 ntBASIC-1.82□□□□□ -2.7
RPUSD4Q96CM3 RNU6-1277P-201ENST00000364561 107 ntBASIC-1.82□□□□□ -2.7
RPUSD4Q96CM3 MIR1255A-201ENST00000408338 113 ntBASIC-1.82□□□□□ -2.7
RPUSD4Q96CM3 RNY4P29-201ENST00000410801 97 ntBASIC-1.82□□□□□ -2.7
RPUSD4Q96CM3 RNU6-539P-201ENST00000516665 103 ntBASIC-1.82□□□□□ -2.7
RPUSD4Q96CM3 AC103706.3-201ENST00000636297 85 ntBASIC-1.82□□□□□ -2.7
RPUSD4Q96CM3 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.83□□□□□ -2.7
RPUSD4Q96CM3 Y_RNA.519-201ENST00000384553 102 ntBASIC-1.83□□□□□ -2.7
RPUSD4Q96CM3 SNORA26.2-201ENST00000390922 122 ntBASIC-1.83□□□□□ -2.7
RPUSD4Q96CM3 U4.2-201ENST00000618561 85 ntBASIC-1.83□□□□□ -2.7
RPUSD4Q96CM3 RNU6-940P-201ENST00000363433 104 ntBASIC-1.84□□□□□ -2.7
RPUSD4Q96CM3 Y_RNA.386-201ENST00000383913 105 ntBASIC-1.84□□□□□ -2.7
RPUSD4Q96CM3 Y_RNA.388-201ENST00000383919 113 ntBASIC-1.84□□□□□ -2.7
RPUSD4Q96CM3 AC110620.1-201ENST00000416042 228 ntBASIC-1.84□□□□□ -2.7
RPUSD4Q96CM3 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.85□□□□□ -2.71
RPUSD4Q96CM3 SNORD113-4-201ENST00000364802 75 ntBASIC-1.85□□□□□ -2.71
RPUSD4Q96CM3 Y_RNA.397-201ENST00000383950 98 ntBASIC-1.85□□□□□ -2.71
RPUSD4Q96CM3 RNA5SP225-201ENST00000410874 135 ntBASIC-1.85□□□□□ -2.71
RPUSD4Q96CM3 RNU6-1312P-201ENST00000362425 108 ntBASIC-1.86□□□□□ -2.71
RPUSD4Q96CM3 Y_RNA.382-201ENST00000365672 114 ntBASIC-1.86□□□□□ -2.71
RPUSD4Q96CM3 RNU6-800P-201ENST00000384473 103 ntBASIC-1.86□□□□□ -2.71
RPUSD4Q96CM3 SNORD45.2-201ENST00000363552 72 ntBASIC-1.87□□□□□ -2.71
RPUSD4Q96CM3 AL627230.5-201ENST00000619807 58 ntBASIC-1.87□□□□□ -2.71
RPUSD4Q96CM3 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.88□□□□□ -2.71
RPUSD4Q96CM3 Y_RNA.565-201ENST00000384719 101 ntBASIC-1.88□□□□□ -2.71
RPUSD4Q96CM3 MIR548H4-201ENST00000408689 111 ntBASIC-1.88□□□□□ -2.71
RPUSD4Q96CM3 MIR548X-201ENST00000580069 75 ntBASIC-1.88□□□□□ -2.71
RPUSD4Q96CM3 RNU6-1255P-201ENST00000363434 112 ntBASIC-1.89□□□□□ -2.71
RPUSD4Q96CM3 MIR1302-4-201ENST00000408701 150 ntBASIC-1.89□□□□□ -2.71
RPUSD4Q96CM3 AL731768.1-201ENST00000603124 139 ntBASIC-1.89□□□□□ -2.71
RPUSD4Q96CM3 MIR4679-1-201ENST00000637619 75 ntBASIC-1.89□□□□□ -2.71
RPUSD4Q96CM3 RNU6-230P-201ENST00000362457 104 ntBASIC-1.9□□□□□ -2.71
RPUSD4Q96CM3 Y_RNA.43-201ENST00000362670 111 ntBASIC-1.9□□□□□ -2.71
RPUSD4Q96CM3 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.9□□□□□ -2.71
RPUSD4Q96CM3 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.9□□□□□ -2.71
RPUSD4Q96CM3 RNU6-345P-201ENST00000517001 107 ntBASIC-1.9□□□□□ -2.71
RPUSD4Q96CM3 RNU6-176P-201ENST00000517196 105 ntBASIC-1.9□□□□□ -2.71
RPUSD4Q96CM3 MIR5693-201ENST00000577722 73 ntBASIC-1.9□□□□□ -2.71
RPUSD4Q96CM3 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.9□□□□□ -2.71
RPUSD4Q96CM3 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.9□□□□□ -2.71
RPUSD4Q96CM3 Y_RNA.79-201ENST00000362992 113 ntBASIC-1.91□□□□□ -2.72
RPUSD4Q96CM3 SNORD78.1-201ENST00000390866 65 ntBASIC-1.91□□□□□ -2.72
RPUSD4Q96CM3 RNU6-854P-201ENST00000364036 107 ntBASIC-1.92□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 212.3 ms