Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.7□□□□□ -2.68
VPS33AQ96AX1 RNU6-242P-201ENST00000384359 107 ntBASIC-1.7□□□□□ -2.68
VPS33AQ96AX1 RNA5SP476-201ENST00000516613 103 ntBASIC-1.7□□□□□ -2.68
VPS33AQ96AX1 MIR409-201ENST00000362237 79 ntBASIC-1.71□□□□□ -2.68
VPS33AQ96AX1 SNORA25.4-201ENST00000363666 124 ntBASIC-1.71□□□□□ -2.68
VPS33AQ96AX1 RNU6-590P-201ENST00000365039 107 ntBASIC-1.71□□□□□ -2.68
VPS33AQ96AX1 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.71□□□□□ -2.68
VPS33AQ96AX1 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.72□□□□□ -2.68
VPS33AQ96AX1 MT-TM-201ENST00000387377 68 ntBASIC-1.72□□□□□ -2.68
VPS33AQ96AX1 RNU6-419P-201ENST00000517030 63 ntBASIC-1.72□□□□□ -2.68
VPS33AQ96AX1 MIR5582-201ENST00000579697 68 ntBASIC-1.72□□□□□ -2.68
VPS33AQ96AX1 MIR4511-201ENST00000582784 87 ntBASIC-1.72□□□□□ -2.68
VPS33AQ96AX1 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.72□□□□□ -2.68
VPS33AQ96AX1 Y_RNA.81-201ENST00000362997 102 ntBASIC-1.74□□□□□ -2.69
VPS33AQ96AX1 RNA5SP266-201ENST00000410273 108 ntBASIC-1.74□□□□□ -2.69
VPS33AQ96AX1 RNU6-300P-201ENST00000459080 104 ntBASIC-1.74□□□□□ -2.69
VPS33AQ96AX1 MIR3938-201ENST00000582157 103 ntBASIC-1.74□□□□□ -2.69
VPS33AQ96AX1 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1.74□□□□□ -2.69
VPS33AQ96AX1 MIR379-201ENST00000362218 67 ntBASIC-1.75□□□□□ -2.69
VPS33AQ96AX1 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.75□□□□□ -2.69
VPS33AQ96AX1 RNU6-820P-201ENST00000384273 107 ntBASIC-1.75□□□□□ -2.69
VPS33AQ96AX1 SNORD30.1-201ENST00000391309 70 ntBASIC-1.75□□□□□ -2.69
VPS33AQ96AX1 RNU6-406P-201ENST00000516470 107 ntBASIC-1.75□□□□□ -2.69
VPS33AQ96AX1 RNU6-573P-201ENST00000383938 106 ntBASIC-1.76□□□□□ -2.69
VPS33AQ96AX1 MIR1254-1-201ENST00000408257 97 ntBASIC-1.76□□□□□ -2.69
VPS33AQ96AX1 RNU7-119P-201ENST00000459279 63 ntBASIC-1.76□□□□□ -2.69
VPS33AQ96AX1 U6.111-201ENST00000636093 83 ntBASIC-1.76□□□□□ -2.69
VPS33AQ96AX1 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.77□□□□□ -2.69
VPS33AQ96AX1 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.77□□□□□ -2.69
VPS33AQ96AX1 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.77□□□□□ -2.69
VPS33AQ96AX1 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.78□□□□□ -2.69
VPS33AQ96AX1 HAR1A.1-201ENST00000459583 118 ntBASIC-1.78□□□□□ -2.69
VPS33AQ96AX1 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.78□□□□□ -2.69
VPS33AQ96AX1 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.79□□□□□ -2.7
VPS33AQ96AX1 RNU6-940P-201ENST00000363433 104 ntBASIC-1.79□□□□□ -2.7
VPS33AQ96AX1 Y_RNA.63-201ENST00000362841 102 ntBASIC-1.8□□□□□ -2.7
VPS33AQ96AX1 RNU6-1169P-201ENST00000363537 103 ntBASIC-1.8□□□□□ -2.7
VPS33AQ96AX1 MIR601-201ENST00000385256 79 ntBASIC-1.8□□□□□ -2.7
VPS33AQ96AX1 MIR1255A-201ENST00000408338 113 ntBASIC-1.8□□□□□ -2.7
VPS33AQ96AX1 AC110620.1-201ENST00000416042 228 ntBASIC-1.8□□□□□ -2.7
VPS33AQ96AX1 AC103706.3-201ENST00000636297 85 ntBASIC-1.8□□□□□ -2.7
VPS33AQ96AX1 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.81□□□□□ -2.7
VPS33AQ96AX1 RNU6-446P-201ENST00000362827 106 ntBASIC-1.81□□□□□ -2.7
VPS33AQ96AX1 SNORD45.2-201ENST00000363552 72 ntBASIC-1.81□□□□□ -2.7
VPS33AQ96AX1 RNU6-857P-201ENST00000515893 110 ntBASIC-1.81□□□□□ -2.7
VPS33AQ96AX1 Y_RNA.386-201ENST00000383913 105 ntBASIC-1.82□□□□□ -2.7
VPS33AQ96AX1 Y_RNA.388-201ENST00000383919 113 ntBASIC-1.82□□□□□ -2.7
VPS33AQ96AX1 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.82□□□□□ -2.7
VPS33AQ96AX1 RNY4P9-201ENST00000363194 97 ntBASIC-1.83□□□□□ -2.7
VPS33AQ96AX1 SNORD73B-201ENST00000364394 72 ntBASIC-1.83□□□□□ -2.7
VPS33AQ96AX1 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.83□□□□□ -2.7
VPS33AQ96AX1 RNU6-800P-201ENST00000384473 103 ntBASIC-1.83□□□□□ -2.7
VPS33AQ96AX1 Y_RNA.519-201ENST00000384553 102 ntBASIC-1.83□□□□□ -2.7
VPS33AQ96AX1 MIR496-201ENST00000385226 102 ntBASIC-1.83□□□□□ -2.7
VPS33AQ96AX1 RNU6-176P-201ENST00000517196 105 ntBASIC-1.83□□□□□ -2.7
VPS33AQ96AX1 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.84□□□□□ -2.7
VPS33AQ96AX1 RNU6-279P-201ENST00000391297 101 ntBASIC-1.84□□□□□ -2.7
VPS33AQ96AX1 RNU6-539P-201ENST00000516665 103 ntBASIC-1.84□□□□□ -2.7
VPS33AQ96AX1 MIR548X-201ENST00000580069 75 ntBASIC-1.84□□□□□ -2.7
VPS33AQ96AX1 RNU6-1298P-201ENST00000362456 101 ntBASIC-1.85□□□□□ -2.71
VPS33AQ96AX1 SNX3P1Y-201ENST00000615757 176 ntBASIC-1.85□□□□□ -2.71
VPS33AQ96AX1 RNY4P27-201ENST00000363341 96 ntBASIC-1.86□□□□□ -2.71
VPS33AQ96AX1 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.87□□□□□ -2.71
VPS33AQ96AX1 RNA5SP225-201ENST00000410874 135 ntBASIC-1.87□□□□□ -2.71
VPS33AQ96AX1 SNX3P1X-201ENST00000414887 175 ntBASIC-1.87□□□□□ -2.71
VPS33AQ96AX1 Y_RNA.722-201ENST00000517279 114 ntBASIC-1.87□□□□□ -2.71
VPS33AQ96AX1 MIR198-201ENST00000637333 62 ntBASIC-1.87□□□□□ -2.71
VPS33AQ96AX1 RNU6-1277P-201ENST00000364561 107 ntBASIC-1.88□□□□□ -2.71
VPS33AQ96AX1 SNORD113-4-201ENST00000364802 75 ntBASIC-1.88□□□□□ -2.71
VPS33AQ96AX1 AL603908.1-201ENST00000406098 201 ntBASIC-1.88□□□□□ -2.71
VPS33AQ96AX1 MIR3202-2-201ENST00000635980 79 ntBASIC-1.88□□□□□ -2.71
VPS33AQ96AX1 U2.22-201ENST00000636441 106 ntBASIC-1.88□□□□□ -2.71
VPS33AQ96AX1 Y_RNA.565-201ENST00000384719 101 ntBASIC-1.89□□□□□ -2.71
VPS33AQ96AX1 MIR548H4-201ENST00000408689 111 ntBASIC-1.89□□□□□ -2.71
VPS33AQ96AX1 RNY4P29-201ENST00000410801 97 ntBASIC-1.89□□□□□ -2.71
VPS33AQ96AX1 RNU6-871P-201ENST00000516122 100 ntBASIC-1.89□□□□□ -2.71
VPS33AQ96AX1 RNU6-345P-201ENST00000517001 107 ntBASIC-1.89□□□□□ -2.71
VPS33AQ96AX1 RNU6-1312P-201ENST00000362425 108 ntBASIC-1.9□□□□□ -2.71
VPS33AQ96AX1 Y_RNA.382-201ENST00000365672 114 ntBASIC-1.9□□□□□ -2.71
VPS33AQ96AX1 Y_RNA.43-201ENST00000362670 111 ntBASIC-1.91□□□□□ -2.72
VPS33AQ96AX1 AL731768.1-201ENST00000603124 139 ntBASIC-1.91□□□□□ -2.72
VPS33AQ96AX1 Y_RNA.397-201ENST00000383950 98 ntBASIC-1.92□□□□□ -2.72
VPS33AQ96AX1 U4.2-201ENST00000618561 85 ntBASIC-1.92□□□□□ -2.72
VPS33AQ96AX1 SNORD78.1-201ENST00000390866 65 ntBASIC-1.95□□□□□ -2.72
VPS33AQ96AX1 MIR5693-201ENST00000577722 73 ntBASIC-1.95□□□□□ -2.72
VPS33AQ96AX1 SNORA26.2-201ENST00000390922 122 ntBASIC-1.97□□□□□ -2.72
VPS33AQ96AX1 AC139453.2-201ENST00000487255 133 ntBASIC-1.97□□□□□ -2.72
VPS33AQ96AX1 RNU6-854P-201ENST00000364036 107 ntBASIC-1.98□□□□□ -2.73
VPS33AQ96AX1 RNU6-776P-201ENST00000364403 104 ntBASIC-1.98□□□□□ -2.73
VPS33AQ96AX1 RNU6-1022P-201ENST00000365049 104 ntBASIC-1.98□□□□□ -2.73
VPS33AQ96AX1 RNU6-471P-201ENST00000383944 106 ntBASIC-1.98□□□□□ -2.73
VPS33AQ96AX1 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.98□□□□□ -2.73
VPS33AQ96AX1 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.98□□□□□ -2.73
VPS33AQ96AX1 RNA5SP170-201ENST00000517150 101 ntBASIC-1.98□□□□□ -2.73
VPS33AQ96AX1 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.98□□□□□ -2.73
VPS33AQ96AX1 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.98□□□□□ -2.73
VPS33AQ96AX1 Y_RNA.59-201ENST00000362828 102 ntBASIC-1.99□□□□□ -2.73
VPS33AQ96AX1 RNA5SP224-201ENST00000365069 126 ntBASIC-1.99□□□□□ -2.73
VPS33AQ96AX1 RNU6-119P-201ENST00000364882 107 ntBASIC-2□□□□□ -2.73
VPS33AQ96AX1 Y_RNA.475-201ENST00000384345 101 ntBASIC-2□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 222.5 ms