Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 RNU6-255P-201ENST00000516957 105 ntBASIC-4.12□□□□□ -3.07
HMGXB3Q12766 MTND5P41-201ENST00000517498 206 ntBASIC-4.13□□□□□ -3.07
HMGXB3Q12766 AL117187.1-201ENST00000555482 181 ntBASIC-4.13□□□□□ -3.07
HMGXB3Q12766 MIR3134-201ENST00000579433 74 ntBASIC-4.13□□□□□ -3.07
HMGXB3Q12766 MALAT1.1-201ENST00000618249 95 ntBASIC-4.13□□□□□ -3.07
HMGXB3Q12766 Y_RNA.316-201ENST00000365118 111 ntBASIC-4.14□□□□□ -3.07
HMGXB3Q12766 RNU6-1255P-201ENST00000363434 112 ntBASIC-4.16□□□□□ -3.07
HMGXB3Q12766 Y_RNA.149-201ENST00000363558 117 ntBASIC-4.16□□□□□ -3.07
HMGXB3Q12766 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-4.16□□□□□ -3.07
HMGXB3Q12766 SNORA25.4-201ENST00000363666 124 ntBASIC-4.17□□□□□ -3.08
HMGXB3Q12766 RNU6-663P-201ENST00000391105 106 ntBASIC-4.17□□□□□ -3.08
HMGXB3Q12766 MIR545-201ENST00000385085 106 ntBASIC-4.18□□□□□ -3.08
HMGXB3Q12766 MTND5P20-201ENST00000448677 143 ntBASIC-4.18□□□□□ -3.08
HMGXB3Q12766 RNU6-907P-201ENST00000390924 102 ntBASIC-4.19□□□□□ -3.08
HMGXB3Q12766 MIR1245B-201ENST00000636115 69 ntBASIC-4.19□□□□□ -3.08
HMGXB3Q12766 Y_RNA.422-201ENST00000384054 114 ntBASIC-4.2□□□□□ -3.08
HMGXB3Q12766 Y_RNA.788-201ENST00000622394 112 ntBASIC-4.2□□□□□ -3.08
HMGXB3Q12766 SNORA40.13-201ENST00000516379 120 ntBASIC-4.21□□□□□ -3.08
HMGXB3Q12766 Y_RNA.709-201ENST00000516952 92 ntBASIC-4.21□□□□□ -3.08
HMGXB3Q12766 MIR4511-201ENST00000582784 87 ntBASIC-4.21□□□□□ -3.08
HMGXB3Q12766 AP000770.2-201ENST00000623694 100 ntBASIC-4.21□□□□□ -3.08
HMGXB3Q12766 MIR4712-201ENST00000583750 82 ntBASIC-4.21□□□□□ -3.08
HMGXB3Q12766 AL353621.2-201ENST00000605340 133 ntBASIC-4.21□□□□□ -3.08
HMGXB3Q12766 RNU6-200P-201ENST00000364743 107 ntBASIC-4.23□□□□□ -3.09
HMGXB3Q12766 RNY4P13-201ENST00000384284 96 ntBASIC-4.23□□□□□ -3.09
HMGXB3Q12766 RNU6-959P-201ENST00000384671 107 ntBASIC-4.23□□□□□ -3.09
HMGXB3Q12766 RNU6-1043P-201ENST00000410355 99 ntBASIC-4.23□□□□□ -3.09
HMGXB3Q12766 RNU6-979P-201ENST00000383896 107 ntBASIC-4.24□□□□□ -3.09
HMGXB3Q12766 RNU6-634P-201ENST00000459134 106 ntBASIC-4.24□□□□□ -3.09
HMGXB3Q12766 AC103706.3-201ENST00000636297 85 ntBASIC-4.24□□□□□ -3.09
HMGXB3Q12766 RNU6-1326P-201ENST00000391262 107 ntBASIC-4.25□□□□□ -3.09
HMGXB3Q12766 MIR548AL-201ENST00000578416 97 ntBASIC-4.25□□□□□ -3.09
HMGXB3Q12766 MTCYBP6-201ENST00000441810 138 ntBASIC-4.26□□□□□ -3.09
HMGXB3Q12766 snoMBII-202.2-201ENST00000517263 86 ntBASIC-4.26□□□□□ -3.09
HMGXB3Q12766 RNU6-844P-201ENST00000517175 102 ntBASIC-4.26□□□□□ -3.09
HMGXB3Q12766 RNU6-379P-201ENST00000363813 104 ntBASIC-4.27□□□□□ -3.09
HMGXB3Q12766 RNU4-85P-201ENST00000364675 123 ntBASIC-4.27□□□□□ -3.09
HMGXB3Q12766 RNU7-200P-201ENST00000516105 62 ntBASIC-4.27□□□□□ -3.09
HMGXB3Q12766 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-4.27□□□□□ -3.09
HMGXB3Q12766 SNORD116-14-201ENST00000383894 92 ntBASIC-4.28□□□□□ -3.09
HMGXB3Q12766 SNORD116-17-201ENST00000383929 92 ntBASIC-4.28□□□□□ -3.09
HMGXB3Q12766 SNORD116-15-201ENST00000384445 92 ntBASIC-4.28□□□□□ -3.09
HMGXB3Q12766 SNORD116-19-201ENST00000384729 92 ntBASIC-4.28□□□□□ -3.09
HMGXB3Q12766 Y_RNA.702-201ENST00000516843 96 ntBASIC-4.28□□□□□ -3.09
HMGXB3Q12766 MIR1302-3-201ENST00000408128 138 ntBASIC-4.29□□□□□ -3.1
HMGXB3Q12766 MIR5588-201ENST00000581890 63 ntBASIC-4.29□□□□□ -3.1
HMGXB3Q12766 Y_RNA.94-201ENST00000363068 106 ntBASIC-4.3□□□□□ -3.1
HMGXB3Q12766 Y_RNA.345-201ENST00000365384 92 ntBASIC-4.3□□□□□ -3.1
HMGXB3Q12766 RNU7-171P-201ENST00000459581 62 ntBASIC-4.3□□□□□ -3.1
HMGXB3Q12766 MTCYBP9-201ENST00000431021 303 ntBASIC-4.31□□□□□ -3.1
HMGXB3Q12766 IGLL4P-201ENST00000614590 133 ntBASIC-4.31□□□□□ -3.1
HMGXB3Q12766 RNU6-1160P-201ENST00000384546 104 ntBASIC-4.32□□□□□ -3.1
HMGXB3Q12766 MIR568-201ENST00000385036 95 ntBASIC-4.32□□□□□ -3.1
HMGXB3Q12766 AL031737.1-201ENST00000450125 223 ntBASIC-4.35□□□□□ -3.11
HMGXB3Q12766 RNU6-589P-201ENST00000516485 107 ntBASIC-4.35□□□□□ -3.11
HMGXB3Q12766 RNU6-1204P-201ENST00000363948 107 ntBASIC-4.36□□□□□ -3.11
HMGXB3Q12766 AC008737.2-201ENST00000599446 118 ntBASIC-4.36□□□□□ -3.11
HMGXB3Q12766 U7.4-201ENST00000614961 63 ntBASIC-4.36□□□□□ -3.11
HMGXB3Q12766 Y_RNA.73-201ENST00000362910 113 ntBASIC-4.37□□□□□ -3.11
HMGXB3Q12766 Y_RNA.489-201ENST00000384410 101 ntBASIC-4.37□□□□□ -3.11
HMGXB3Q12766 SNORD30.1-201ENST00000391309 70 ntBASIC-4.37□□□□□ -3.11
HMGXB3Q12766 MIR488-201ENST00000365739 83 ntBASIC-4.38□□□□□ -3.11
HMGXB3Q12766 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-4.39□□□□□ -3.11
HMGXB3Q12766 AC110620.1-201ENST00000416042 228 ntBASIC-4.39□□□□□ -3.11
HMGXB3Q12766 RNU6-808P-201ENST00000391233 108 ntBASIC-4.4□□□□□ -3.11
HMGXB3Q12766 AC044792.1-201ENST00000593294 196 ntBASIC-4.4□□□□□ -3.11
HMGXB3Q12766 RNU4-33P-201ENST00000364316 85 ntBASIC-4.41□□□□□ -3.11
HMGXB3Q12766 MIR4679-1-201ENST00000637619 75 ntBASIC-4.41□□□□□ -3.11
HMGXB3Q12766 Y_RNA.193-201ENST00000363979 102 ntBASIC-4.41□□□□□ -3.12
HMGXB3Q12766 Y_RNA.593-201ENST00000410292 98 ntBASIC-4.41□□□□□ -3.12
HMGXB3Q12766 MIR450A1-201ENST00000362262 91 ntBASIC-4.42□□□□□ -3.12
HMGXB3Q12766 RNU6-1008P-201ENST00000384160 104 ntBASIC-4.42□□□□□ -3.12
HMGXB3Q12766 RNY1P5-201ENST00000383890 115 ntBASIC-4.43□□□□□ -3.12
HMGXB3Q12766 RNU6-886P-201ENST00000384319 105 ntBASIC-4.43□□□□□ -3.12
HMGXB3Q12766 Y_RNA.535-201ENST00000384612 99 ntBASIC-4.44□□□□□ -3.12
HMGXB3Q12766 RNA5SP449-201ENST00000516871 130 ntBASIC-4.45□□□□□ -3.12
HMGXB3Q12766 Y_RNA.506-201ENST00000384494 102 ntBASIC-4.46□□□□□ -3.12
HMGXB3Q12766 AL117351.2-201ENST00000513571 157 ntBASIC-4.46□□□□□ -3.12
HMGXB3Q12766 RNU6-1134P-201ENST00000365156 101 ntBASIC-4.46□□□□□ -3.12
HMGXB3Q12766 Y_RNA.406-201ENST00000383984 100 ntBASIC-4.46□□□□□ -3.12
HMGXB3Q12766 RNU6-346P-201ENST00000516288 111 ntBASIC-4.46□□□□□ -3.12
HMGXB3Q12766 RNU6-539P-201ENST00000516665 103 ntBASIC-4.47□□□□□ -3.13
HMGXB3Q12766 AC026407.1-201ENST00000518369 204 ntBASIC-4.47□□□□□ -3.13
HMGXB3Q12766 RNU6-1312P-201ENST00000362425 108 ntBASIC-4.48□□□□□ -3.13
HMGXB3Q12766 MIR606-201ENST00000384851 96 ntBASIC-4.48□□□□□ -3.13
HMGXB3Q12766 U6.111-201ENST00000636093 83 ntBASIC-4.48□□□□□ -3.13
HMGXB3Q12766 MIR4666B-201ENST00000578142 81 ntBASIC-4.5□□□□□ -3.13
HMGXB3Q12766 Y_RNA.165-201ENST00000363721 102 ntBASIC-4.51□□□□□ -3.13
HMGXB3Q12766 RNU6-1212P-201ENST00000517023 104 ntBASIC-4.51□□□□□ -3.13
HMGXB3Q12766 RNU6-640P-201ENST00000363693 105 ntBASIC-4.51□□□□□ -3.13
HMGXB3Q12766 RNU6-738P-201ENST00000384531 106 ntBASIC-4.51□□□□□ -3.13
HMGXB3Q12766 RNU6-871P-201ENST00000516122 100 ntBASIC-4.52□□□□□ -3.13
HMGXB3Q12766 Y_RNA.261-201ENST00000364631 102 ntBASIC-4.53□□□□□ -3.13
HMGXB3Q12766 RNU6-1056P-201ENST00000383996 107 ntBASIC-4.53□□□□□ -3.13
HMGXB3Q12766 RNU6-209P-201ENST00000384118 107 ntBASIC-4.53□□□□□ -3.13
HMGXB3Q12766 Y_RNA.464-201ENST00000384282 110 ntBASIC-4.53□□□□□ -3.13
HMGXB3Q12766 RNU6-446P-201ENST00000362827 106 ntBASIC-4.54□□□□□ -3.14
HMGXB3Q12766 MIR363-201ENST00000384840 75 ntBASIC-4.54□□□□□ -3.14
HMGXB3Q12766 MIR548S-201ENST00000581352 82 ntBASIC-4.54□□□□□ -3.14
HMGXB3Q12766 RNU6-59P-201ENST00000384787 107 ntBASIC-4.55□□□□□ -3.14
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms