Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 RNU6-627P-201ENST00000364032 102 ntBASIC-2.82□□□□□ -2.86
PRKDCP78527 RNU6-804P-201ENST00000384286 107 ntBASIC-2.82□□□□□ -2.86
PRKDCP78527 RNU6-634P-201ENST00000459134 106 ntBASIC-2.82□□□□□ -2.86
PRKDCP78527 MIR3171-201ENST00000584270 74 ntBASIC-2.82□□□□□ -2.86
PRKDCP78527 RNU6-219P-201ENST00000364728 107 ntBASIC-2.83□□□□□ -2.86
PRKDCP78527 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-2.83□□□□□ -2.86
PRKDCP78527 RNU6-122P-201ENST00000516818 107 ntBASIC-2.83□□□□□ -2.86
PRKDCP78527 RNU6-1312P-201ENST00000362425 108 ntBASIC-2.84□□□□□ -2.86
PRKDCP78527 snoMBII-202.2-201ENST00000517263 86 ntBASIC-2.84□□□□□ -2.86
PRKDCP78527 AC141273.2-201ENST00000618989 130 ntBASIC-2.84□□□□□ -2.86
PRKDCP78527 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-2.84□□□□□ -2.86
PRKDCP78527 RNU6-959P-201ENST00000384671 107 ntBASIC-2.85□□□□□ -2.87
PRKDCP78527 RNU6-875P-201ENST00000516488 106 ntBASIC-2.85□□□□□ -2.87
PRKDCP78527 Y_RNA.350-201ENST00000365409 98 ntBASIC-2.85□□□□□ -2.87
PRKDCP78527 RNU4-33P-201ENST00000364316 85 ntBASIC-2.85□□□□□ -2.87
PRKDCP78527 AC004792.1-201ENST00000614523 137 ntBASIC-2.85□□□□□ -2.87
PRKDCP78527 MIR548BB-201ENST00000626714 66 ntBASIC-2.85□□□□□ -2.87
PRKDCP78527 Y_RNA.489-201ENST00000384410 101 ntBASIC-2.86□□□□□ -2.87
PRKDCP78527 MIR1245B-201ENST00000636115 69 ntBASIC-2.86□□□□□ -2.87
PRKDCP78527 Y_RNA.356-201ENST00000365475 113 ntBASIC-2.86□□□□□ -2.87
PRKDCP78527 MIR548H4-201ENST00000408689 111 ntBASIC-2.86□□□□□ -2.87
PRKDCP78527 Y_RNA.138-201ENST00000363462 102 ntBASIC-2.87□□□□□ -2.87
PRKDCP78527 RNU6-1015P-201ENST00000517121 99 ntBASIC-2.87□□□□□ -2.87
PRKDCP78527 RNU6-808P-201ENST00000391233 108 ntBASIC-2.88□□□□□ -2.87
PRKDCP78527 RNU6-907P-201ENST00000390924 102 ntBASIC-2.88□□□□□ -2.87
PRKDCP78527 RNU6-844P-201ENST00000517175 102 ntBASIC-2.88□□□□□ -2.87
PRKDCP78527 Y_RNA.422-201ENST00000384054 114 ntBASIC-2.88□□□□□ -2.87
PRKDCP78527 RNU6-111P-201ENST00000517179 105 ntBASIC-2.9□□□□□ -2.87
PRKDCP78527 SNORD30.1-201ENST00000391309 70 ntBASIC-2.9□□□□□ -2.87
PRKDCP78527 U7.4-201ENST00000614961 63 ntBASIC-2.9□□□□□ -2.87
PRKDCP78527 RNU7-120P-201ENST00000459334 63 ntBASIC-2.91□□□□□ -2.87
PRKDCP78527 MTND4P29-201ENST00000503122 1372 ntBASIC-2.91□□□□□ -2.88
PRKDCP78527 AC044792.1-201ENST00000593294 196 ntBASIC-2.91□□□□□ -2.88
PRKDCP78527 AC062037.2-201ENST00000610137 73 ntBASIC-2.93□□□□□ -2.88
PRKDCP78527 RNU7-171P-201ENST00000459581 62 ntBASIC-2.93□□□□□ -2.88
PRKDCP78527 MTND5P20-201ENST00000448677 143 ntBASIC-2.93□□□□□ -2.88
PRKDCP78527 MIR569-201ENST00000385228 96 ntBASIC-2.94□□□□□ -2.88
PRKDCP78527 Y_RNA.345-201ENST00000365384 92 ntBASIC-2.95□□□□□ -2.88
PRKDCP78527 AL589823.1-201ENST00000429577 183 ntBASIC-2.95□□□□□ -2.88
PRKDCP78527 RNU6-1160P-201ENST00000384546 104 ntBASIC-2.95□□□□□ -2.88
PRKDCP78527 AL117351.2-201ENST00000513571 157 ntBASIC-2.95□□□□□ -2.88
PRKDCP78527 AC103706.3-201ENST00000636297 85 ntBASIC-2.96□□□□□ -2.88
PRKDCP78527 SNORA25.4-201ENST00000363666 124 ntBASIC-2.96□□□□□ -2.88
PRKDCP78527 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-2.96□□□□□ -2.88
PRKDCP78527 Y_RNA.193-201ENST00000363979 102 ntBASIC-2.97□□□□□ -2.88
PRKDCP78527 MIR1302-3-201ENST00000408128 138 ntBASIC-2.97□□□□□ -2.88
PRKDCP78527 RNU6-687P-201ENST00000516443 89 ntBASIC-2.97□□□□□ -2.88
PRKDCP78527 Y_RNA.216-201ENST00000364205 93 ntBASIC-2.97□□□□□ -2.89
PRKDCP78527 MTATP8P1-201ENST00000467115 207 ntBASIC-2.97□□□□□ -2.89
PRKDCP78527 AC090425.1-201ENST00000610007 140 ntBASIC-2.97□□□□□ -2.89
PRKDCP78527 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-2.98□□□□□ -2.89
PRKDCP78527 RNU6-871P-201ENST00000516122 100 ntBASIC-2.98□□□□□ -2.89
PRKDCP78527 MIR3134-201ENST00000579433 74 ntBASIC-2.99□□□□□ -2.89
PRKDCP78527 Y_RNA.94-201ENST00000363068 106 ntBASIC-2.99□□□□□ -2.89
PRKDCP78527 Y_RNA.149-201ENST00000363558 117 ntBASIC-3□□□□□ -2.89
PRKDCP78527 AC008737.2-201ENST00000599446 118 ntBASIC-3□□□□□ -2.89
PRKDCP78527 IGLL4P-201ENST00000614590 133 ntBASIC-3□□□□□ -2.89
PRKDCP78527 Y_RNA.316-201ENST00000365118 111 ntBASIC-3.01□□□□□ -2.89
PRKDCP78527 RNU6-589P-201ENST00000516485 107 ntBASIC-3.01□□□□□ -2.89
PRKDCP78527 RNU6-257P-201ENST00000410238 98 ntBASIC-3.02□□□□□ -2.89
PRKDCP78527 RNU6-200P-201ENST00000364743 107 ntBASIC-3.02□□□□□ -2.89
PRKDCP78527 Y_RNA.379-201ENST00000365653 102 ntBASIC-3.02□□□□□ -2.89
PRKDCP78527 RNU6-209P-201ENST00000384118 107 ntBASIC-3.03□□□□□ -2.89
PRKDCP78527 Y_RNA.545-201ENST00000384652 105 ntBASIC-3.03□□□□□ -2.89
PRKDCP78527 AC110620.1-201ENST00000416042 228 ntBASIC-3.03□□□□□ -2.89
PRKDCP78527 MIR4511-201ENST00000582784 87 ntBASIC-3.04□□□□□ -2.9
PRKDCP78527 AC008267.6-201ENST00000441664 139 ntBASIC-3.05□□□□□ -2.9
PRKDCP78527 Y_RNA.702-201ENST00000516843 96 ntBASIC-3.05□□□□□ -2.9
PRKDCP78527 MTND5P41-201ENST00000517498 206 ntBASIC-3.05□□□□□ -2.9
PRKDCP78527 Y_RNA.788-201ENST00000622394 112 ntBASIC-3.06□□□□□ -2.9
PRKDCP78527 RNU6-838P-201ENST00000363399 108 ntBASIC-3.06□□□□□ -2.9
PRKDCP78527 MTCYBP9-201ENST00000431021 303 ntBASIC-3.06□□□□□ -2.9
PRKDCP78527 Y_RNA.73-201ENST00000362910 113 ntBASIC-3.07□□□□□ -2.9
PRKDCP78527 RNU6-1008P-201ENST00000384160 104 ntBASIC-3.07□□□□□ -2.9
PRKDCP78527 MALAT1.1-201ENST00000618249 95 ntBASIC-3.07□□□□□ -2.9
PRKDCP78527 RNU6-1024P-201ENST00000384199 107 ntBASIC-3.07□□□□□ -2.9
PRKDCP78527 Y_RNA.506-201ENST00000384494 102 ntBASIC-3.07□□□□□ -2.9
PRKDCP78527 SNORD113-1-201ENST00000365321 69 ntBASIC-3.08□□□□□ -2.9
PRKDCP78527 MIR4795-201ENST00000584182 89 ntBASIC-3.08□□□□□ -2.9
PRKDCP78527 AC114801.3-201ENST00000510231 177 ntBASIC-3.08□□□□□ -2.9
PRKDCP78527 RNU6-1056P-201ENST00000383996 107 ntBASIC-3.09□□□□□ -2.9
PRKDCP78527 MIR450A1-201ENST00000362262 91 ntBASIC-3.09□□□□□ -2.9
PRKDCP78527 RNU6-1131P-201ENST00000364955 107 ntBASIC-3.1□□□□□ -2.91
PRKDCP78527 RNU6-242P-201ENST00000384359 107 ntBASIC-3.1□□□□□ -2.91
PRKDCP78527 MIR4712-201ENST00000583750 82 ntBASIC-3.1□□□□□ -2.91
PRKDCP78527 RNU6-986P-201ENST00000363133 102 ntBASIC-3.11□□□□□ -2.91
PRKDCP78527 MIR4666B-201ENST00000578142 81 ntBASIC-3.11□□□□□ -2.91
PRKDCP78527 MIR4760-201ENST00000585040 80 ntBASIC-3.11□□□□□ -2.91
PRKDCP78527 MIR494-201ENST00000349529 81 ntBASIC-3.11□□□□□ -2.91
PRKDCP78527 RNU6-32P-201ENST00000383948 107 ntBASIC-3.11□□□□□ -2.91
PRKDCP78527 RNU6-13P-201ENST00000384248 107 ntBASIC-3.11□□□□□ -2.91
PRKDCP78527 RNU6-12P-201ENST00000384604 107 ntBASIC-3.11□□□□□ -2.91
PRKDCP78527 RNU6-41P-201ENST00000384741 107 ntBASIC-3.11□□□□□ -2.91
PRKDCP78527 RNU6-1276P-201ENST00000365372 104 ntBASIC-3.12□□□□□ -2.91
PRKDCP78527 RNU7-200P-201ENST00000516105 62 ntBASIC-3.12□□□□□ -2.91
PRKDCP78527 MIR548F4-201ENST00000408515 105 ntBASIC-3.12□□□□□ -2.91
PRKDCP78527 RNU6-539P-201ENST00000516665 103 ntBASIC-3.13□□□□□ -2.91
PRKDCP78527 RNU6-738P-201ENST00000384531 106 ntBASIC-3.14□□□□□ -2.91
PRKDCP78527 RNU6-1168P-201ENST00000390831 104 ntBASIC-3.14□□□□□ -2.91
PRKDCP78527 Y_RNA.593-201ENST00000410292 98 ntBASIC-3.14□□□□□ -2.91
Retrieved 100 of 98,524 protein–RNA pairs in 8.6 ms