Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 RNU6-634P-201ENST00000459134 106 ntBASIC-2.82□□□□□ -2.86
MBD3O95983 RNU6-231P-201ENST00000517122 103 ntBASIC-2.82□□□□□ -2.86
MBD3O95983 RNU6-294P-201ENST00000364999 102 ntBASIC-2.83□□□□□ -2.86
MBD3O95983 RNU6-974P-201ENST00000384099 108 ntBASIC-2.83□□□□□ -2.86
MBD3O95983 RNU6-520P-201ENST00000384717 104 ntBASIC-2.83□□□□□ -2.86
MBD3O95983 RNY3P8-201ENST00000411366 126 ntBASIC-2.83□□□□□ -2.86
MBD3O95983 RNU6-1015P-201ENST00000517121 99 ntBASIC-2.83□□□□□ -2.86
MBD3O95983 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.84□□□□□ -2.86
MBD3O95983 AC097484.2-201ENST00000509147 251 ntBASIC-2.84□□□□□ -2.86
MBD3O95983 SNORD60-201ENST00000383903 83 ntBASIC-2.85□□□□□ -2.87
MBD3O95983 RNU6-787P-201ENST00000384032 107 ntBASIC-2.86□□□□□ -2.87
MBD3O95983 RNU6-1079P-201ENST00000362861 110 ntBASIC-2.88□□□□□ -2.87
MBD3O95983 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.88□□□□□ -2.87
MBD3O95983 RNU6-810P-201ENST00000364001 107 ntBASIC-2.89□□□□□ -2.87
MBD3O95983 RNU6-663P-201ENST00000391105 106 ntBASIC-2.89□□□□□ -2.87
MBD3O95983 RNU6-122P-201ENST00000516818 107 ntBASIC-2.89□□□□□ -2.87
MBD3O95983 Y_RNA.513-201ENST00000384522 100 ntBASIC-2.9□□□□□ -2.87
MBD3O95983 RNY4P9-201ENST00000363194 97 ntBASIC-2.91□□□□□ -2.88
MBD3O95983 SNORA25.5-201ENST00000363782 126 ntBASIC-2.91□□□□□ -2.88
MBD3O95983 RNU6-361P-201ENST00000364454 107 ntBASIC-2.91□□□□□ -2.88
MBD3O95983 Y_RNA.369-201ENST00000365568 117 ntBASIC-2.91□□□□□ -2.88
MBD3O95983 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.91□□□□□ -2.88
MBD3O95983 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.91□□□□□ -2.88
MBD3O95983 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.91□□□□□ -2.88
MBD3O95983 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.91□□□□□ -2.88
MBD3O95983 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.91□□□□□ -2.88
MBD3O95983 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.91□□□□□ -2.88
MBD3O95983 SNORA40B-201ENST00000385573 128 ntBASIC-2.92□□□□□ -2.88
MBD3O95983 MIR548N-201ENST00000408742 75 ntBASIC-2.92□□□□□ -2.88
MBD3O95983 SNORA25.4-201ENST00000363666 124 ntBASIC-2.93□□□□□ -2.88
MBD3O95983 RNU7-119P-201ENST00000459279 63 ntBASIC-2.93□□□□□ -2.88
MBD3O95983 RNU6-1121P-201ENST00000516802 109 ntBASIC-2.93□□□□□ -2.88
MBD3O95983 SNORD45.2-201ENST00000363552 72 ntBASIC-2.94□□□□□ -2.88
MBD3O95983 SNORD116.2-201ENST00000391251 93 ntBASIC-2.94□□□□□ -2.88
MBD3O95983 Y_RNA.349-201ENST00000365406 102 ntBASIC-2.95□□□□□ -2.88
MBD3O95983 MIR581-201ENST00000384895 96 ntBASIC-2.95□□□□□ -2.88
MBD3O95983 SNORA17.4-201ENST00000391287 132 ntBASIC-2.96□□□□□ -2.88
MBD3O95983 RNU6-649P-201ENST00000384463 107 ntBASIC-2.98□□□□□ -2.89
MBD3O95983 MIR202-201ENST00000362219 110 ntBASIC-2.99□□□□□ -2.89
MBD3O95983 Y_RNA.566-201ENST00000384735 101 ntBASIC-2.99□□□□□ -2.89
MBD3O95983 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-2.99□□□□□ -2.89
MBD3O95983 RNU6-871P-201ENST00000516122 100 ntBASIC-3□□□□□ -2.89
MBD3O95983 MIR5582-201ENST00000579697 68 ntBASIC-3□□□□□ -2.89
MBD3O95983 RNU6-803P-201ENST00000516034 102 ntBASIC-3.02□□□□□ -2.89
MBD3O95983 SNORA40.16-201ENST00000517238 121 ntBASIC-3.02□□□□□ -2.89
MBD3O95983 MIR3202-2-201ENST00000635980 79 ntBASIC-3.03□□□□□ -2.89
MBD3O95983 RNU6-940P-201ENST00000363433 104 ntBASIC-3.04□□□□□ -2.9
MBD3O95983 SNORD30.1-201ENST00000391309 70 ntBASIC-3.04□□□□□ -2.9
MBD3O95983 MIR4511-201ENST00000582784 87 ntBASIC-3.04□□□□□ -2.9
MBD3O95983 AC062037.1-201ENST00000605302 128 ntBASIC-3.04□□□□□ -2.9
MBD3O95983 SNX3P1Y-201ENST00000615757 176 ntBASIC-3.04□□□□□ -2.9
MBD3O95983 AC103706.3-201ENST00000636297 85 ntBASIC-3.04□□□□□ -2.9
MBD3O95983 RNU6-141P-201ENST00000410499 105 ntBASIC-3.05□□□□□ -2.9
MBD3O95983 AL451105.1-201ENST00000450005 189 ntBASIC-3.05□□□□□ -2.9
MBD3O95983 Y_RNA.658-201ENST00000515990 97 ntBASIC-3.05□□□□□ -2.9
MBD3O95983 Y_RNA.519-201ENST00000384553 102 ntBASIC-3.06□□□□□ -2.9
MBD3O95983 Y_RNA.545-201ENST00000384652 105 ntBASIC-3.06□□□□□ -2.9
MBD3O95983 MIR379-201ENST00000362218 67 ntBASIC-3.08□□□□□ -2.9
MBD3O95983 RNU6-176P-201ENST00000517196 105 ntBASIC-3.08□□□□□ -2.9
MBD3O95983 SNORD113-3-201ENST00000364830 72 ntBASIC-3.09□□□□□ -2.9
MBD3O95983 RNU6-530P-201ENST00000391180 107 ntBASIC-3.09□□□□□ -2.9
MBD3O95983 RNU6-539P-201ENST00000516665 103 ntBASIC-3.09□□□□□ -2.9
MBD3O95983 RNU6-1296P-201ENST00000383879 107 ntBASIC-3.1□□□□□ -2.91
MBD3O95983 U2.22-201ENST00000636441 106 ntBASIC-3.1□□□□□ -2.91
MBD3O95983 RNU6-1324P-201ENST00000384222 107 ntBASIC-3.11□□□□□ -2.91
MBD3O95983 MIR4679-1-201ENST00000637619 75 ntBASIC-3.11□□□□□ -2.91
MBD3O95983 RNU6-1124P-201ENST00000384169 107 ntBASIC-3.12□□□□□ -2.91
MBD3O95983 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-3.12□□□□□ -2.91
MBD3O95983 U6.111-201ENST00000636093 83 ntBASIC-3.12□□□□□ -2.91
MBD3O95983 Y_RNA.129-201ENST00000363392 110 ntBASIC-3.14□□□□□ -2.91
MBD3O95983 MIR3938-201ENST00000582157 103 ntBASIC-3.14□□□□□ -2.91
MBD3O95983 MIR4426-201ENST00000640330 63 ntBASIC-3.16□□□□□ -2.92
MBD3O95983 RNU6-279P-201ENST00000391297 101 ntBASIC-3.17□□□□□ -2.92
MBD3O95983 RNU6-857P-201ENST00000515893 110 ntBASIC-3.18□□□□□ -2.92
MBD3O95983 RNU6-419P-201ENST00000517030 63 ntBASIC-3.18□□□□□ -2.92
MBD3O95983 MIR5693-201ENST00000577722 73 ntBASIC-3.18□□□□□ -2.92
MBD3O95983 MIRLET7A2-201ENST00000362105 72 ntBASIC-3.19□□□□□ -2.92
MBD3O95983 Y_RNA.59-201ENST00000362828 102 ntBASIC-3.2□□□□□ -2.92
MBD3O95983 Y_RNA.81-201ENST00000362997 102 ntBASIC-3.2□□□□□ -2.92
MBD3O95983 RNU6-912P-201ENST00000363800 104 ntBASIC-3.2□□□□□ -2.92
MBD3O95983 RNU6-68P-201ENST00000516576 104 ntBASIC-3.2□□□□□ -2.92
MBD3O95983 RNU6-590P-201ENST00000365039 107 ntBASIC-3.21□□□□□ -2.92
MBD3O95983 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-3.21□□□□□ -2.92
MBD3O95983 RNU6-300P-201ENST00000459080 104 ntBASIC-3.21□□□□□ -2.92
MBD3O95983 MIR548AJ2-201ENST00000408539 92 ntBASIC-3.23□□□□□ -2.93
MBD3O95983 Y_RNA.134-201ENST00000363435 105 ntBASIC-3.26□□□□□ -2.93
MBD3O95983 Y_RNA.79-201ENST00000362992 113 ntBASIC-3.27□□□□□ -2.93
MBD3O95983 SNORD73B-201ENST00000364394 72 ntBASIC-3.27□□□□□ -2.93
MBD3O95983 Y_RNA.511-201ENST00000384514 103 ntBASIC-3.27□□□□□ -2.93
MBD3O95983 MIR1255A-201ENST00000408338 113 ntBASIC-3.27□□□□□ -2.93
MBD3O95983 RNU6-800P-201ENST00000384473 103 ntBASIC-3.29□□□□□ -2.94
MBD3O95983 AC110620.1-201ENST00000416042 228 ntBASIC-3.3□□□□□ -2.94
MBD3O95983 RNU6-1047P-201ENST00000364418 107 ntBASIC-3.31□□□□□ -2.94
MBD3O95983 RNA5SP170-201ENST00000517150 101 ntBASIC-3.31□□□□□ -2.94
MBD3O95983 Y_RNA.830-201ENST00000628531 96 ntBASIC-3.32□□□□□ -2.94
MBD3O95983 RNU6-573P-201ENST00000383938 106 ntBASIC-3.33□□□□□ -2.94
MBD3O95983 SNORA26.2-201ENST00000390922 122 ntBASIC-3.33□□□□□ -2.94
MBD3O95983 RNY4P29-201ENST00000410801 97 ntBASIC-3.33□□□□□ -2.94
MBD3O95983 RNY4P25-201ENST00000459254 96 ntBASIC-3.33□□□□□ -2.94
MBD3O95983 Y_RNA.434-201ENST00000384090 100 ntBASIC-3.34□□□□□ -2.94
Retrieved 100 of 98,524 protein–RNA pairs in 7.6 ms