Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 RNU7-171P-201ENST00000459581 62 ntBASIC-2.74□□□□□ -2.85
UPK1AO00322 Y_RNA.658-201ENST00000515990 97 ntBASIC-2.74□□□□□ -2.85
UPK1AO00322 Y_RNA.134-201ENST00000363435 105 ntBASIC-2.75□□□□□ -2.85
UPK1AO00322 RNU6-231P-201ENST00000517122 103 ntBASIC-2.75□□□□□ -2.85
UPK1AO00322 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-2.75□□□□□ -2.85
UPK1AO00322 RNU6-1277P-201ENST00000364561 107 ntBASIC-2.76□□□□□ -2.85
UPK1AO00322 RNY4P25-201ENST00000459254 96 ntBASIC-2.77□□□□□ -2.85
UPK1AO00322 MIR3134-201ENST00000579433 74 ntBASIC-2.77□□□□□ -2.85
UPK1AO00322 RNU6-242P-201ENST00000384359 107 ntBASIC-2.78□□□□□ -2.85
UPK1AO00322 SNORA17.4-201ENST00000391287 132 ntBASIC-2.78□□□□□ -2.85
UPK1AO00322 RNU6-49P-201ENST00000384256 107 ntBASIC-2.79□□□□□ -2.86
UPK1AO00322 MIR548N-201ENST00000408742 75 ntBASIC-2.79□□□□□ -2.86
UPK1AO00322 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.79□□□□□ -2.86
UPK1AO00322 RNU6-687P-201ENST00000516443 89 ntBASIC-2.79□□□□□ -2.86
UPK1AO00322 RNU6-1121P-201ENST00000516802 109 ntBASIC-2.8□□□□□ -2.86
UPK1AO00322 SNORD45.2-201ENST00000363552 72 ntBASIC-2.81□□□□□ -2.86
UPK1AO00322 RNU6-411P-201ENST00000384451 107 ntBASIC-2.81□□□□□ -2.86
UPK1AO00322 MIR3671-201ENST00000580455 88 ntBASIC-2.81□□□□□ -2.86
UPK1AO00322 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-2.81□□□□□ -2.86
UPK1AO00322 Y_RNA.788-201ENST00000622394 112 ntBASIC-2.81□□□□□ -2.86
UPK1AO00322 RNU6-361P-201ENST00000364454 107 ntBASIC-2.83□□□□□ -2.86
UPK1AO00322 Y_RNA.566-201ENST00000384735 101 ntBASIC-2.83□□□□□ -2.86
UPK1AO00322 RNU6-919P-201ENST00000516731 104 ntBASIC-2.83□□□□□ -2.86
UPK1AO00322 Y_RNA.94-201ENST00000363068 106 ntBASIC-2.84□□□□□ -2.86
UPK1AO00322 RNU6-912P-201ENST00000363800 104 ntBASIC-2.84□□□□□ -2.86
UPK1AO00322 RNU6-1296P-201ENST00000383879 107 ntBASIC-2.84□□□□□ -2.86
UPK1AO00322 SNORA40B-201ENST00000385573 128 ntBASIC-2.84□□□□□ -2.86
UPK1AO00322 MIR3910-1-201ENST00000580936 111 ntBASIC-2.84□□□□□ -2.86
UPK1AO00322 Y_RNA.830-201ENST00000628531 96 ntBASIC-2.84□□□□□ -2.86
UPK1AO00322 RNU6-530P-201ENST00000391180 107 ntBASIC-2.85□□□□□ -2.87
UPK1AO00322 Y_RNA.511-201ENST00000384514 103 ntBASIC-2.86□□□□□ -2.87
UPK1AO00322 AL731768.1-201ENST00000603124 139 ntBASIC-2.86□□□□□ -2.87
UPK1AO00322 MIR494-201ENST00000349529 81 ntBASIC-2.87□□□□□ -2.87
UPK1AO00322 MIRLET7A3-201ENST00000362116 74 ntBASIC-2.87□□□□□ -2.87
UPK1AO00322 RNU6-1276P-201ENST00000365372 104 ntBASIC-2.87□□□□□ -2.87
UPK1AO00322 RNU7-119P-201ENST00000459279 63 ntBASIC-2.87□□□□□ -2.87
UPK1AO00322 Y_RNA.63-201ENST00000362841 102 ntBASIC-2.89□□□□□ -2.87
UPK1AO00322 SNORA25.5-201ENST00000363782 126 ntBASIC-2.89□□□□□ -2.87
UPK1AO00322 RNU6-215P-201ENST00000365169 102 ntBASIC-2.89□□□□□ -2.87
UPK1AO00322 Y_RNA.434-201ENST00000384090 100 ntBASIC-2.89□□□□□ -2.87
UPK1AO00322 SNORD20-201ENST00000384550 80 ntBASIC-2.89□□□□□ -2.87
UPK1AO00322 MIR509-1-201ENST00000385265 94 ntBASIC-2.89□□□□□ -2.87
UPK1AO00322 MIR509-2-201ENST00000390724 91 ntBASIC-2.89□□□□□ -2.87
UPK1AO00322 RNU6-1044P-201ENST00000384755 107 ntBASIC-2.9□□□□□ -2.87
UPK1AO00322 RNU6-663P-201ENST00000391105 106 ntBASIC-2.9□□□□□ -2.87
UPK1AO00322 RNY4P30-201ENST00000410216 95 ntBASIC-2.9□□□□□ -2.87
UPK1AO00322 RNA5SP89-201ENST00000410300 108 ntBASIC-2.9□□□□□ -2.87
UPK1AO00322 RNU6-1015P-201ENST00000517121 99 ntBASIC-2.9□□□□□ -2.87
UPK1AO00322 MIR379-201ENST00000362218 67 ntBASIC-2.91□□□□□ -2.88
UPK1AO00322 MT-TR-201ENST00000387439 65 ntBASIC-2.91□□□□□ -2.88
UPK1AO00322 RNU6-122P-201ENST00000516818 107 ntBASIC-2.91□□□□□ -2.88
UPK1AO00322 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-2.91□□□□□ -2.88
UPK1AO00322 U7.4-201ENST00000614961 63 ntBASIC-2.91□□□□□ -2.88
UPK1AO00322 MIR450A2-201ENST00000385022 100 ntBASIC-2.92□□□□□ -2.88
UPK1AO00322 MIR1254-1-201ENST00000408257 97 ntBASIC-2.92□□□□□ -2.88
UPK1AO00322 MIR4666B-201ENST00000578142 81 ntBASIC-2.92□□□□□ -2.88
UPK1AO00322 Y_RNA.266-201ENST00000364678 96 ntBASIC-2.93□□□□□ -2.88
UPK1AO00322 RNU6-634P-201ENST00000459134 106 ntBASIC-2.93□□□□□ -2.88
UPK1AO00322 MIR4426-201ENST00000640330 63 ntBASIC-2.93□□□□□ -2.88
UPK1AO00322 AL451105.1-201ENST00000450005 189 ntBASIC-2.94□□□□□ -2.88
UPK1AO00322 SNORD113-1-201ENST00000365321 69 ntBASIC-2.95□□□□□ -2.88
UPK1AO00322 MIR548AJ2-201ENST00000408539 92 ntBASIC-2.95□□□□□ -2.88
UPK1AO00322 RNU6-176P-201ENST00000517196 105 ntBASIC-2.95□□□□□ -2.88
UPK1AO00322 SNORA40.16-201ENST00000517238 121 ntBASIC-2.95□□□□□ -2.88
UPK1AO00322 RNA5SP106-201ENST00000517274 100 ntBASIC-2.95□□□□□ -2.88
UPK1AO00322 SNORA25.4-201ENST00000363666 124 ntBASIC-2.96□□□□□ -2.88
UPK1AO00322 RNU6-800P-201ENST00000384473 103 ntBASIC-2.96□□□□□ -2.88
UPK1AO00322 AL606753.1-201ENST00000427435 87 ntBASIC-2.96□□□□□ -2.88
UPK1AO00322 RNU6-68P-201ENST00000516576 104 ntBASIC-2.96□□□□□ -2.88
UPK1AO00322 Y_RNA.129-201ENST00000363392 110 ntBASIC-2.97□□□□□ -2.88
UPK1AO00322 RNY4P10-201ENST00000365571 96 ntBASIC-2.97□□□□□ -2.88
UPK1AO00322 RNU6-300P-201ENST00000459080 104 ntBASIC-2.97□□□□□ -2.88
UPK1AO00322 SNORD30.1-201ENST00000391309 70 ntBASIC-2.99□□□□□ -2.89
UPK1AO00322 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-2.99□□□□□ -2.89
UPK1AO00322 RNU6-44P-201ENST00000384045 107 ntBASIC-3□□□□□ -2.89
UPK1AO00322 Y_RNA.652-201ENST00000458902 102 ntBASIC-3□□□□□ -2.89
UPK1AO00322 SNORD114-13-201ENST00000364377 74 ntBASIC-3.01□□□□□ -2.89
UPK1AO00322 RNU6-590P-201ENST00000365039 107 ntBASIC-3.01□□□□□ -2.89
UPK1AO00322 Y_RNA.545-201ENST00000384652 105 ntBASIC-3.02□□□□□ -2.89
UPK1AO00322 Y_RNA.612-201ENST00000410717 95 ntBASIC-3.02□□□□□ -2.89
UPK1AO00322 RNU6-987P-201ENST00000384759 104 ntBASIC-3.03□□□□□ -2.89
UPK1AO00322 RNU6-940P-201ENST00000363433 104 ntBASIC-3.04□□□□□ -2.9
UPK1AO00322 RNU6-294P-201ENST00000364999 102 ntBASIC-3.04□□□□□ -2.9
UPK1AO00322 RNU6-1047P-201ENST00000364418 107 ntBASIC-3.05□□□□□ -2.9
UPK1AO00322 RNU6-871P-201ENST00000516122 100 ntBASIC-3.05□□□□□ -2.9
UPK1AO00322 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-3.05□□□□□ -2.9
UPK1AO00322 AL359920.1-201ENST00000618332 176 ntBASIC-3.06□□□□□ -2.9
UPK1AO00322 Y_RNA.657-201ENST00000515983 102 ntBASIC-3.07□□□□□ -2.9
UPK1AO00322 RNU6-787P-201ENST00000384032 107 ntBASIC-3.08□□□□□ -2.9
UPK1AO00322 RNU6-820P-201ENST00000384273 107 ntBASIC-3.08□□□□□ -2.9
UPK1AO00322 Y_RNA.694-201ENST00000516677 117 ntBASIC-3.09□□□□□ -2.9
UPK1AO00322 Y_RNA.320-201ENST00000365144 102 ntBASIC-3.1□□□□□ -2.91
UPK1AO00322 MIR4511-201ENST00000582784 87 ntBASIC-3.1□□□□□ -2.91
UPK1AO00322 AC103706.3-201ENST00000636297 85 ntBASIC-3.1□□□□□ -2.91
UPK1AO00322 Y_RNA.663-201ENST00000516043 101 ntBASIC-3.11□□□□□ -2.91
UPK1AO00322 MIR4679-1-201ENST00000637619 75 ntBASIC-3.11□□□□□ -2.91
UPK1AO00322 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-3.12□□□□□ -2.91
UPK1AO00322 RNU6-419P-201ENST00000517030 63 ntBASIC-3.12□□□□□ -2.91
UPK1AO00322 MIR3938-201ENST00000582157 103 ntBASIC-3.12□□□□□ -2.91
UPK1AO00322 RNU6-737P-201ENST00000365370 107 ntBASIC-3.13□□□□□ -2.91
Retrieved 100 of 98,524 protein–RNA pairs in 229 ms