Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 RNU6-755P-201ENST00000364400 103 ntBASIC-2.53□□□□□ -2.81
VAPAQ9P0L0 Y_RNA.434-201ENST00000384090 100 ntBASIC-2.53□□□□□ -2.81
VAPAQ9P0L0 Y_RNA.443-201ENST00000384135 111 ntBASIC-2.53□□□□□ -2.81
VAPAQ9P0L0 Y_RNA.604-201ENST00000410574 102 ntBASIC-2.53□□□□□ -2.81
VAPAQ9P0L0 RNU6-1047P-201ENST00000364418 107 ntBASIC-2.54□□□□□ -2.82
VAPAQ9P0L0 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-2.54□□□□□ -2.82
VAPAQ9P0L0 SNORD116.2-201ENST00000391251 93 ntBASIC-2.54□□□□□ -2.82
VAPAQ9P0L0 RNU6-346P-201ENST00000516288 111 ntBASIC-2.54□□□□□ -2.82
VAPAQ9P0L0 RNU6-1045P-201ENST00000516321 107 ntBASIC-2.54□□□□□ -2.82
VAPAQ9P0L0 AL353621.2-201ENST00000605340 133 ntBASIC-2.54□□□□□ -2.82
VAPAQ9P0L0 MIR7110-201ENST00000612638 86 ntBASIC-2.54□□□□□ -2.82
VAPAQ9P0L0 MIR1297-201ENST00000637311 77 ntBASIC-2.54□□□□□ -2.82
VAPAQ9P0L0 RNA5SP93-201ENST00000362525 114 ntBASIC-2.55□□□□□ -2.82
VAPAQ9P0L0 Y_RNA.343-201ENST00000365354 112 ntBASIC-2.55□□□□□ -2.82
VAPAQ9P0L0 SNORD116-22-201ENST00000384430 92 ntBASIC-2.55□□□□□ -2.82
VAPAQ9P0L0 RNU6-834P-201ENST00000362367 110 ntBASIC-2.56□□□□□ -2.82
VAPAQ9P0L0 RNU6-1296P-201ENST00000383879 107 ntBASIC-2.57□□□□□ -2.82
VAPAQ9P0L0 RNU6-231P-201ENST00000517122 103 ntBASIC-2.57□□□□□ -2.82
VAPAQ9P0L0 MIR4426-201ENST00000640330 63 ntBASIC-2.57□□□□□ -2.82
VAPAQ9P0L0 Y_RNA.320-201ENST00000365144 102 ntBASIC-2.58□□□□□ -2.82
VAPAQ9P0L0 RNU6-1241P-201ENST00000384536 107 ntBASIC-2.58□□□□□ -2.82
VAPAQ9P0L0 RNU7-200P-201ENST00000516105 62 ntBASIC-2.58□□□□□ -2.82
VAPAQ9P0L0 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.58□□□□□ -2.82
VAPAQ9P0L0 RNU6-92P-201ENST00000605893 104 ntBASIC-2.58□□□□□ -2.82
VAPAQ9P0L0 SNORD60.1-201ENST00000362451 73 ntBASIC-2.59□□□□□ -2.82
VAPAQ9P0L0 Y_RNA.63-201ENST00000362841 102 ntBASIC-2.59□□□□□ -2.82
VAPAQ9P0L0 Y_RNA.228-201ENST00000364346 98 ntBASIC-2.59□□□□□ -2.82
VAPAQ9P0L0 MIR548AI-201ENST00000579940 88 ntBASIC-2.59□□□□□ -2.82
VAPAQ9P0L0 MIR379-201ENST00000362218 67 ntBASIC-2.6□□□□□ -2.83
VAPAQ9P0L0 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-2.61□□□□□ -2.83
VAPAQ9P0L0 RNU6-895P-201ENST00000384125 103 ntBASIC-2.62□□□□□ -2.83
VAPAQ9P0L0 RNU6-463P-201ENST00000384340 107 ntBASIC-2.62□□□□□ -2.83
VAPAQ9P0L0 RNU6-1191P-201ENST00000516799 107 ntBASIC-2.62□□□□□ -2.83
VAPAQ9P0L0 RNU6-1277P-201ENST00000364561 107 ntBASIC-2.63□□□□□ -2.83
VAPAQ9P0L0 RNU6-590P-201ENST00000365039 107 ntBASIC-2.63□□□□□ -2.83
VAPAQ9P0L0 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.63□□□□□ -2.83
VAPAQ9P0L0 RNU6-300P-201ENST00000459080 104 ntBASIC-2.63□□□□□ -2.83
VAPAQ9P0L0 AC006160.2-201ENST00000637708 154 ntBASIC-2.63□□□□□ -2.83
VAPAQ9P0L0 MIR154-201ENST00000385243 84 ntBASIC-2.64□□□□□ -2.83
VAPAQ9P0L0 RNU6-1015P-201ENST00000517121 99 ntBASIC-2.64□□□□□ -2.83
VAPAQ9P0L0 MIR5693-201ENST00000577722 73 ntBASIC-2.64□□□□□ -2.83
VAPAQ9P0L0 RNU6-886P-201ENST00000384319 105 ntBASIC-2.65□□□□□ -2.83
VAPAQ9P0L0 Y_RNA.544-201ENST00000384650 113 ntBASIC-2.65□□□□□ -2.83
VAPAQ9P0L0 RNU6-1011P-201ENST00000384668 107 ntBASIC-2.65□□□□□ -2.83
VAPAQ9P0L0 SNORA40B-201ENST00000385573 128 ntBASIC-2.65□□□□□ -2.83
VAPAQ9P0L0 MALAT1.1-201ENST00000618249 95 ntBASIC-2.65□□□□□ -2.83
VAPAQ9P0L0 SNORD116-14-201ENST00000383894 92 ntBASIC-2.66□□□□□ -2.84
VAPAQ9P0L0 SNORD116-17-201ENST00000383929 92 ntBASIC-2.66□□□□□ -2.84
VAPAQ9P0L0 SNORD116-15-201ENST00000384445 92 ntBASIC-2.66□□□□□ -2.84
VAPAQ9P0L0 SNORD116-19-201ENST00000384729 92 ntBASIC-2.66□□□□□ -2.84
VAPAQ9P0L0 RNU6-380P-201ENST00000410207 107 ntBASIC-2.66□□□□□ -2.84
VAPAQ9P0L0 RNU6-542P-201ENST00000516405 103 ntBASIC-2.66□□□□□ -2.84
VAPAQ9P0L0 RNU6-70P-201ENST00000516438 60 ntBASIC-2.66□□□□□ -2.84
VAPAQ9P0L0 SNORA40.16-201ENST00000517238 121 ntBASIC-2.66□□□□□ -2.84
VAPAQ9P0L0 Y_RNA.59-201ENST00000362828 102 ntBASIC-2.67□□□□□ -2.84
VAPAQ9P0L0 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-2.67□□□□□ -2.84
VAPAQ9P0L0 Y_RNA.129-201ENST00000363392 110 ntBASIC-2.68□□□□□ -2.84
VAPAQ9P0L0 RNY4P7-201ENST00000364600 96 ntBASIC-2.68□□□□□ -2.84
VAPAQ9P0L0 Y_RNA.506-201ENST00000384494 102 ntBASIC-2.68□□□□□ -2.84
VAPAQ9P0L0 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.69□□□□□ -2.84
VAPAQ9P0L0 Y_RNA.261-201ENST00000364631 102 ntBASIC-2.69□□□□□ -2.84
VAPAQ9P0L0 TMSB4XP3-201ENST00000445144 114 ntBASIC-2.69□□□□□ -2.84
VAPAQ9P0L0 Y_RNA.788-201ENST00000622394 112 ntBASIC-2.69□□□□□ -2.84
VAPAQ9P0L0 MIR2052-201ENST00000636055 55 ntBASIC-2.69□□□□□ -2.84
VAPAQ9P0L0 MIR450A1-201ENST00000362262 91 ntBASIC-2.7□□□□□ -2.84
VAPAQ9P0L0 Y_RNA.79-201ENST00000362992 113 ntBASIC-2.7□□□□□ -2.84
VAPAQ9P0L0 RNU6-1169P-201ENST00000363537 103 ntBASIC-2.7□□□□□ -2.84
VAPAQ9P0L0 RNU6-742P-201ENST00000365289 107 ntBASIC-2.7□□□□□ -2.84
VAPAQ9P0L0 AL451105.1-201ENST00000450005 189 ntBASIC-2.7□□□□□ -2.84
VAPAQ9P0L0 RNY4P25-201ENST00000459254 96 ntBASIC-2.7□□□□□ -2.84
VAPAQ9P0L0 AL731768.1-201ENST00000603124 139 ntBASIC-2.7□□□□□ -2.84
VAPAQ9P0L0 Y_RNA.17-201ENST00000362433 111 ntBASIC-2.71□□□□□ -2.84
VAPAQ9P0L0 RNU6-255P-201ENST00000516957 105 ntBASIC-2.71□□□□□ -2.84
VAPAQ9P0L0 Y_RNA.73-201ENST00000362910 113 ntBASIC-2.72□□□□□ -2.84
VAPAQ9P0L0 RNU6-315P-201ENST00000362666 107 ntBASIC-2.73□□□□□ -2.85
VAPAQ9P0L0 RNU6-675P-201ENST00000384236 104 ntBASIC-2.73□□□□□ -2.85
VAPAQ9P0L0 MIR488-201ENST00000365739 83 ntBASIC-2.74□□□□□ -2.85
VAPAQ9P0L0 Y_RNA.403-201ENST00000383977 101 ntBASIC-2.74□□□□□ -2.85
VAPAQ9P0L0 RNU6-800P-201ENST00000384473 103 ntBASIC-2.74□□□□□ -2.85
VAPAQ9P0L0 SCARNA15.1-201ENST00000516384 125 ntBASIC-2.74□□□□□ -2.85
VAPAQ9P0L0 RNU6-345P-201ENST00000517001 107 ntBASIC-2.74□□□□□ -2.85
VAPAQ9P0L0 snoMBII-202.2-201ENST00000517263 86 ntBASIC-2.74□□□□□ -2.85
VAPAQ9P0L0 SNORD45.2-201ENST00000363552 72 ntBASIC-2.75□□□□□ -2.85
VAPAQ9P0L0 Y_RNA.316-201ENST00000365118 111 ntBASIC-2.75□□□□□ -2.85
VAPAQ9P0L0 MT-TG-201ENST00000387429 68 ntBASIC-2.75□□□□□ -2.85
VAPAQ9P0L0 Y_RNA.607-201ENST00000410597 98 ntBASIC-2.75□□□□□ -2.85
VAPAQ9P0L0 MIR3134-201ENST00000579433 74 ntBASIC-2.75□□□□□ -2.85
VAPAQ9P0L0 MIRLET7A3-201ENST00000362116 74 ntBASIC-2.76□□□□□ -2.85
VAPAQ9P0L0 RNU6-176P-201ENST00000517196 105 ntBASIC-2.76□□□□□ -2.85
VAPAQ9P0L0 Y_RNA.134-201ENST00000363435 105 ntBASIC-2.77□□□□□ -2.85
VAPAQ9P0L0 RNU6-589P-201ENST00000516485 107 ntBASIC-2.77□□□□□ -2.85
VAPAQ9P0L0 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-2.78□□□□□ -2.85
VAPAQ9P0L0 SNORA40.13-201ENST00000516379 120 ntBASIC-2.78□□□□□ -2.85
VAPAQ9P0L0 RNU6-687P-201ENST00000516443 89 ntBASIC-2.78□□□□□ -2.85
VAPAQ9P0L0 AL031737.1-201ENST00000450125 223 ntBASIC-2.79□□□□□ -2.86
VAPAQ9P0L0 RNU6-844P-201ENST00000517175 102 ntBASIC-2.79□□□□□ -2.86
VAPAQ9P0L0 RNY1P5-201ENST00000383890 115 ntBASIC-2.8□□□□□ -2.86
VAPAQ9P0L0 RNU6-122P-201ENST00000516818 107 ntBASIC-2.81□□□□□ -2.86
VAPAQ9P0L0 MIR4712-201ENST00000583750 82 ntBASIC-2.82□□□□□ -2.86
VAPAQ9P0L0 RNU6-1079P-201ENST00000362861 110 ntBASIC-2.83□□□□□ -2.86
Retrieved 100 of 98,524 protein–RNA pairs in 221.8 ms