Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 RNU6-810P-201ENST00000364001 107 ntBASIC-0.43□□□□□ -2.48
CDX2Q99626 MT-TQ-201ENST00000387372 72 ntBASIC-0.43□□□□□ -2.48
CDX2Q99626 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.43□□□□□ -2.48
CDX2Q99626 MIR8485-201ENST00000401372 91 ntBASIC-0.43□□□□□ -2.48
CDX2Q99626 RNU6-871P-201ENST00000516122 100 ntBASIC-0.43□□□□□ -2.48
CDX2Q99626 RNU6-231P-201ENST00000517122 103 ntBASIC-0.43□□□□□ -2.48
CDX2Q99626 SNORD116.2-201ENST00000391251 93 ntBASIC-0.44□□□□□ -2.48
CDX2Q99626 MIR1207-201ENST00000408249 87 ntBASIC-0.44□□□□□ -2.48
CDX2Q99626 RNU6-122P-201ENST00000516818 107 ntBASIC-0.44□□□□□ -2.48
CDX2Q99626 SNORA40.16-201ENST00000517238 121 ntBASIC-0.44□□□□□ -2.48
CDX2Q99626 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.44□□□□□ -2.48
CDX2Q99626 MIR6818-201ENST00000621576 65 ntBASIC-0.44□□□□□ -2.48
CDX2Q99626 RNU6-446P-201ENST00000362827 106 ntBASIC-0.45□□□□□ -2.48
CDX2Q99626 RNU6-669P-201ENST00000365575 107 ntBASIC-0.45□□□□□ -2.48
CDX2Q99626 MIR548AA1-201ENST00000384971 97 ntBASIC-0.45□□□□□ -2.48
CDX2Q99626 AC110620.1-201ENST00000416042 228 ntBASIC-0.45□□□□□ -2.48
CDX2Q99626 MIR466-201ENST00000580653 84 ntBASIC-0.45□□□□□ -2.48
CDX2Q99626 U4.2-201ENST00000618561 85 ntBASIC-0.45□□□□□ -2.48
CDX2Q99626 MIR125B1-201ENST00000385236 88 ntBASIC-0.46□□□□□ -2.48
CDX2Q99626 Y_RNA.603-201ENST00000410571 108 ntBASIC-0.46□□□□□ -2.48
CDX2Q99626 uc_338.19-201ENST00000616808 99 ntBASIC-0.46□□□□□ -2.48
CDX2Q99626 MIR6874-201ENST00000635894 71 ntBASIC-0.46□□□□□ -2.48
CDX2Q99626 RNU6-1079P-201ENST00000362861 110 ntBASIC-0.47□□□□□ -2.48
CDX2Q99626 Y_RNA.139-201ENST00000363464 102 ntBASIC-0.47□□□□□ -2.48
CDX2Q99626 RNU6-563P-201ENST00000364872 108 ntBASIC-0.47□□□□□ -2.48
CDX2Q99626 RNU6-1296P-201ENST00000383879 107 ntBASIC-0.47□□□□□ -2.48
CDX2Q99626 SNORD63.2-201ENST00000516303 64 ntBASIC-0.47□□□□□ -2.48
CDX2Q99626 Y_RNA.69-201ENST00000362885 109 ntBASIC-0.48□□□□□ -2.49
CDX2Q99626 SNORD113-4-201ENST00000364802 75 ntBASIC-0.48□□□□□ -2.49
CDX2Q99626 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-0.48□□□□□ -2.49
CDX2Q99626 snoU83B.1-201ENST00000517136 88 ntBASIC-0.48□□□□□ -2.49
CDX2Q99626 MIR7110-201ENST00000612638 86 ntBASIC-0.48□□□□□ -2.49
CDX2Q99626 AC103706.3-201ENST00000636297 85 ntBASIC-0.48□□□□□ -2.49
CDX2Q99626 MIR429-201ENST00000362106 83 ntBASIC-0.49□□□□□ -2.49
CDX2Q99626 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.49□□□□□ -2.49
CDX2Q99626 MIR633-201ENST00000384821 98 ntBASIC-0.49□□□□□ -2.49
CDX2Q99626 SNORD83B-201ENST00000386745 93 ntBASIC-0.49□□□□□ -2.49
CDX2Q99626 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-0.49□□□□□ -2.49
CDX2Q99626 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.49□□□□□ -2.49
CDX2Q99626 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.49□□□□□ -2.49
CDX2Q99626 MIR3938-201ENST00000582157 103 ntBASIC-0.49□□□□□ -2.49
CDX2Q99626 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.49□□□□□ -2.49
CDX2Q99626 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.49□□□□□ -2.49
CDX2Q99626 AC091912.2-201ENST00000624798 167 ntBASIC-0.49□□□□□ -2.49
CDX2Q99626 RNU6-471P-201ENST00000383944 106 ntBASIC-0.5□□□□□ -2.49
CDX2Q99626 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.5□□□□□ -2.49
CDX2Q99626 RNY3P8-201ENST00000411366 126 ntBASIC-0.5□□□□□ -2.49
CDX2Q99626 AC013734.1-201ENST00000619329 111 ntBASIC-0.5□□□□□ -2.49
CDX2Q99626 RNU6-247P-201ENST00000362636 107 ntBASIC-0.51□□□□□ -2.49
CDX2Q99626 SNORA40B-201ENST00000385573 128 ntBASIC-0.51□□□□□ -2.49
CDX2Q99626 RNU6-1111P-201ENST00000391118 107 ntBASIC-0.51□□□□□ -2.49
CDX2Q99626 AC139453.2-201ENST00000487255 133 ntBASIC-0.51□□□□□ -2.49
CDX2Q99626 RNU6-1312P-201ENST00000362425 108 ntBASIC-0.52□□□□□ -2.49
CDX2Q99626 RNU6-940P-201ENST00000363433 104 ntBASIC-0.52□□□□□ -2.49
CDX2Q99626 Y_RNA.340-201ENST00000365330 92 ntBASIC-0.52□□□□□ -2.49
CDX2Q99626 MIR29B1-201ENST00000385015 81 ntBASIC-0.52□□□□□ -2.49
CDX2Q99626 RNU6-995P-201ENST00000391244 107 ntBASIC-0.52□□□□□ -2.49
CDX2Q99626 RNU6-829P-201ENST00000363700 112 ntBASIC-0.53□□□□□ -2.49
CDX2Q99626 RNU6-164P-201ENST00000364604 103 ntBASIC-0.53□□□□□ -2.49
CDX2Q99626 MIR587-201ENST00000384845 96 ntBASIC-0.53□□□□□ -2.49
CDX2Q99626 AC120024.2-201ENST00000576526 175 ntBASIC-0.53□□□□□ -2.49
CDX2Q99626 MIR378F-201ENST00000578143 78 ntBASIC-0.53□□□□□ -2.49
CDX2Q99626 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.53□□□□□ -2.49
CDX2Q99626 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.54□□□□□ -2.5
CDX2Q99626 Y_RNA.699-201ENST00000516803 93 ntBASIC-0.54□□□□□ -2.5
CDX2Q99626 MIR4320-201ENST00000636981 65 ntBASIC-0.54□□□□□ -2.5
CDX2Q99626 MIR581-201ENST00000384895 96 ntBASIC-0.55□□□□□ -2.5
CDX2Q99626 RNU6-1206P-201ENST00000516339 103 ntBASIC-0.55□□□□□ -2.5
CDX2Q99626 SCARNA17-201ENST00000516183 144 ntBASIC-0.56□□□□□ -2.5
CDX2Q99626 U6.97-201ENST00000636904 101 ntBASIC-0.56□□□□□ -2.5
CDX2Q99626 RNU6-79P-201ENST00000362511 107 ntBASIC-0.57□□□□□ -2.5
CDX2Q99626 SNORA27.2-201ENST00000363365 126 ntBASIC-0.57□□□□□ -2.5
CDX2Q99626 RNU7-160P-201ENST00000516660 62 ntBASIC-0.57□□□□□ -2.5
CDX2Q99626 MIR202-201ENST00000362219 110 ntBASIC-0.58□□□□□ -2.5
CDX2Q99626 RNU6-828P-201ENST00000364876 107 ntBASIC-0.58□□□□□ -2.5
CDX2Q99626 RNU6-742P-201ENST00000365289 107 ntBASIC-0.58□□□□□ -2.5
CDX2Q99626 RNU6-520P-201ENST00000384717 104 ntBASIC-0.58□□□□□ -2.5
CDX2Q99626 MIR6502-201ENST00000617296 76 ntBASIC-0.58□□□□□ -2.5
CDX2Q99626 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-0.58□□□□□ -2.5
CDX2Q99626 RNU6-576P-201ENST00000390854 102 ntBASIC-0.59□□□□□ -2.5
CDX2Q99626 RNU6-530P-201ENST00000391180 107 ntBASIC-0.59□□□□□ -2.5
CDX2Q99626 AC018880.2-201ENST00000414265 201 ntBASIC-0.59□□□□□ -2.5
CDX2Q99626 RNU7-119P-201ENST00000459279 63 ntBASIC-0.59□□□□□ -2.5
CDX2Q99626 RNU6-590P-201ENST00000365039 107 ntBASIC-0.6□□□□□ -2.51
CDX2Q99626 AC125388.1-201ENST00000459631 156 ntBASIC-0.6□□□□□ -2.51
CDX2Q99626 RNU6-419P-201ENST00000517030 63 ntBASIC-0.6□□□□□ -2.51
CDX2Q99626 AC079150.2-201ENST00000443733 78 ntBASIC-0.61□□□□□ -2.51
CDX2Q99626 AL451105.1-201ENST00000450005 189 ntBASIC-0.61□□□□□ -2.51
CDX2Q99626 MIR4520-1-201ENST00000582609 70 ntBASIC-0.62□□□□□ -2.51
CDX2Q99626 SNORD114-3-201ENST00000364969 75 ntBASIC-0.63□□□□□ -2.51
CDX2Q99626 MIR487B-201ENST00000385021 84 ntBASIC-0.63□□□□□ -2.51
CDX2Q99626 RNU6-980P-201ENST00000516925 103 ntBASIC-0.63□□□□□ -2.51
CDX2Q99626 MIR548X-201ENST00000580069 75 ntBASIC-0.63□□□□□ -2.51
CDX2Q99626 MIR4324-201ENST00000584846 72 ntBASIC-0.63□□□□□ -2.51
CDX2Q99626 Y_RNA.223-201ENST00000364290 113 ntBASIC-0.64□□□□□ -2.51
CDX2Q99626 MIR4306-201ENST00000583390 91 ntBASIC-0.64□□□□□ -2.51
CDX2Q99626 Y_RNA.678-201ENST00000516408 96 ntBASIC-0.65□□□□□ -2.51
CDX2Q99626 RNU6-499P-201ENST00000365615 107 ntBASIC-0.66□□□□□ -2.52
CDX2Q99626 RNU6-68P-201ENST00000516576 104 ntBASIC-0.66□□□□□ -2.52
CDX2Q99626 MIR4426-201ENST00000640330 63 ntBASIC-0.66□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 196.8 ms